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32 lines
960 B
Plaintext
32 lines
960 B
Plaintext
##
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# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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#
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# Copyright:: Copyright 2012-2014 Uni.Lu/LCSB, NTUA
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# Authors:: Robert Schmidt <roschmidt@ohri.ca>, Cedric Laczny <cedric.laczny@uni.lu>, Fotis Georgatos <fotis@cern.ch>
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# License:: MIT/GPL
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# $Id$
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#
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##
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name = 'SAMtools'
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version = '1.3'
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homepage = 'http://www.htslib.org/'
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description = """SAM Tools provide various utilities for manipulating alignments in the SAM format,
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including sorting, merging, indexing and generating alignments in a per-position format."""
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toolchain = {'name': 'foss', 'version': '2015g'}
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toolchainopts = {'optarch': True, 'pic': True}
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source_urls = ['https://github.com/samtools/%(namelower)s/releases/download/%(version)s']
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sources = [SOURCELOWER_TAR_BZ2]
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# Patch Makefile to link against zlib provided by EB
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patches = ['SAMtools-1.3_Makefile.patch']
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dependencies = [
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('ncurses', '5.9'),
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('zlib', '1.2.8'),
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]
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moduleclass = 'bio'
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