mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
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new file: i/IRODS/IRODS-0.7.3.eb new file: l/libxc/libxc-5.1.5-intel-2020a.eb new file: n/NodeODM/NodeODM-2.2.0-GCCcore-11.3.0.eb new file: o/ODM/ODM-2.8.7/.dockerignore new file: o/ODM/ODM-2.8.7/.github/workflows/publish-docker-and-wsl.yaml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-docker-gpu.yaml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-snap.yml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-windows.yml new file: o/ODM/ODM-2.8.7/.github/workflows/test-build-prs.yaml new file: o/ODM/ODM-2.8.7/.gitignore new file: o/ODM/ODM-2.8.7/.gitmodules new file: o/ODM/ODM-2.8.7/CNAME new file: o/ODM/ODM-2.8.7/CONTRIBUTING.md new file: o/ODM/ODM-2.8.7/Dockerfile new file: o/ODM/ODM-2.8.7/LICENSE new file: o/ODM/ODM-2.8.7/README.md new file: o/ODM/ODM-2.8.7/SuperBuild/CMakeLists.txt new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Ceres.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Entwine.cmake new file: 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file: o/ODM/ODM-2.8.7/configure.py new file: o/ODM/ODM-2.8.7/configure.sh new file: o/ODM/ODM-2.8.7/console.bat new file: o/ODM/ODM-2.8.7/contrib/blender/README.md new file: o/ODM/ODM-2.8.7/contrib/blender/common.py new file: o/ODM/ODM-2.8.7/contrib/blender/odm_photo.py new file: o/ODM/ODM-2.8.7/contrib/blender/odm_video.py new file: o/ODM/ODM-2.8.7/contrib/blender/photo_360.blend new file: o/ODM/ODM-2.8.7/contrib/blender/photo_vr.blend new file: o/ODM/ODM-2.8.7/contrib/grass/README.md new file: o/ODM/ODM-2.8.7/contrib/grass/odm_grass.py new file: o/ODM/ODM-2.8.7/contrib/mergepreview/README.md new file: o/ODM/ODM-2.8.7/contrib/mergepreview/mergepreview.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/README.md new file: o/ODM/ODM-2.8.7/contrib/ndvi/agricultural_indices.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/ndvi.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/rename_sentera_agx710_multispectral_tif.py new file: o/ODM/ODM-2.8.7/contrib/orthorectify/README.md new file: o/ODM/ODM-2.8.7/contrib/orthorectify/orthorectify.py new file: o/ODM/ODM-2.8.7/contrib/orthorectify/run.sh new file: o/ODM/ODM-2.8.7/contrib/pc2dem/README.md new file: o/ODM/ODM-2.8.7/contrib/pc2dem/pc2dem.py new file: o/ODM/ODM-2.8.7/contrib/resize/README.md new file: o/ODM/ODM-2.8.7/contrib/resize/requirements.txt new file: o/ODM/ODM-2.8.7/contrib/resize/resize.py new file: o/ODM/ODM-2.8.7/contrib/shell/odm_exif2utm.sh new file: o/ODM/ODM-2.8.7/contrib/visveg/readme.md new file: o/ODM/ODM-2.8.7/contrib/visveg/vegind.py new file: o/ODM/ODM-2.8.7/docker/README new file: o/ODM/ODM-2.8.7/docker/g++ new file: o/ODM/ODM-2.8.7/docker/gcc new file: o/ODM/ODM-2.8.7/docs/issue_template.md new file: o/ODM/ODM-2.8.7/gpu.Dockerfile new file: o/ODM/ODM-2.8.7/innosetup.iss new file: o/ODM/ODM-2.8.7/licenses/libext_copyright.txt new file: o/ODM/ODM-2.8.7/licenses/libx11_copyright.txt new file: o/ODM/ODM-2.8.7/licenses/license.md new file: o/ODM/ODM-2.8.7/odm_docker_readme.txt new file: o/ODM/ODM-2.8.7/opendm/__init__.py new file: o/ODM/ODM-2.8.7/opendm/boundary.py new file: o/ODM/ODM-2.8.7/opendm/camera.py new file: o/ODM/ODM-2.8.7/opendm/cogeo.py new file: o/ODM/ODM-2.8.7/opendm/concurrency.py new file: o/ODM/ODM-2.8.7/opendm/config.py new file: o/ODM/ODM-2.8.7/opendm/context.py new file: o/ODM/ODM-2.8.7/opendm/cropper.py new file: o/ODM/ODM-2.8.7/opendm/cutline.py new file: o/ODM/ODM-2.8.7/opendm/dem/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/commands.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/types.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/utils.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/distance_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/extended_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/partition_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/grid/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/grid/builder.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/io/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/io/las_io.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/one_partition.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/partition_plan.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/quad_partitions.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/selector.py new 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o/ODM/ODM-2.8.7/opendm/ogctiles.py new file: o/ODM/ODM-2.8.7/opendm/orthophoto.py new file: o/ODM/ODM-2.8.7/opendm/osfm.py new file: o/ODM/ODM-2.8.7/opendm/photo.py new file: o/ODM/ODM-2.8.7/opendm/point_cloud.py new file: o/ODM/ODM-2.8.7/opendm/progress.py new file: o/ODM/ODM-2.8.7/opendm/pseudogeo.py new file: o/ODM/ODM-2.8.7/opendm/remote.py new file: o/ODM/ODM-2.8.7/opendm/report/dsm_gradient.png new file: o/ODM/ODM-2.8.7/opendm/report/overlap_color_map.txt new file: o/ODM/ODM-2.8.7/opendm/report/overlap_diagram_legend.png new file: o/ODM/ODM-2.8.7/opendm/rollingshutter.py new file: o/ODM/ODM-2.8.7/opendm/shots.py new file: o/ODM/ODM-2.8.7/opendm/system.py new file: o/ODM/ODM-2.8.7/opendm/thermal.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/__init__.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/dji_unpack.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/flir_unpack.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/thermal_utils.py new file: o/ODM/ODM-2.8.7/opendm/tiles/color_relief.txt new file: o/ODM/ODM-2.8.7/opendm/tiles/gdal2tiles.py new file: o/ODM/ODM-2.8.7/opendm/tiles/hsv_merge.py new file: o/ODM/ODM-2.8.7/opendm/tiles/tiler.py new file: o/ODM/ODM-2.8.7/opendm/types.py new file: o/ODM/ODM-2.8.7/opendm/utils.py new file: o/ODM/ODM-2.8.7/opendm/vendor/__init__.py new file: o/ODM/ODM-2.8.7/opendm/vendor/gdal_fillnodata.py new file: o/ODM/ODM-2.8.7/portable.Dockerfile new file: o/ODM/ODM-2.8.7/requirements.txt new file: o/ODM/ODM-2.8.7/run.bat new file: o/ODM/ODM-2.8.7/run.py new file: o/ODM/ODM-2.8.7/run.sh new file: o/ODM/ODM-2.8.7/snap/snapcraft.yaml new file: o/ODM/ODM-2.8.7/snap/snapcraft21.yaml new file: o/ODM/ODM-2.8.7/stages/__init__.py new file: o/ODM/ODM-2.8.7/stages/dataset.py new file: o/ODM/ODM-2.8.7/stages/mvstex.py new file: o/ODM/ODM-2.8.7/stages/odm_app.py new file: o/ODM/ODM-2.8.7/stages/odm_dem.py new file: o/ODM/ODM-2.8.7/stages/odm_filterpoints.py new file: o/ODM/ODM-2.8.7/stages/odm_georeferencing.py new file: o/ODM/ODM-2.8.7/stages/odm_meshing.py new file: o/ODM/ODM-2.8.7/stages/odm_orthophoto.py new file: o/ODM/ODM-2.8.7/stages/odm_postprocess.py new file: o/ODM/ODM-2.8.7/stages/odm_report.py new file: o/ODM/ODM-2.8.7/stages/openmvs.py new file: o/ODM/ODM-2.8.7/stages/run_opensfm.py new file: o/ODM/ODM-2.8.7/stages/splitmerge.py new file: o/ODM/ODM-2.8.7/start-dev-env.sh new file: o/ODM/ODM-2.8.7/test.sh new file: o/ODM/ODM-2.8.7/tests/assets/.gitignore new file: o/ODM/ODM-2.8.7/tests/assets/gcp_extras.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_latlon_south.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_latlon_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_michigan_feet_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_utm_north_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/images/DJI_0002.JPG new file: o/ODM/ODM-2.8.7/tests/assets/reconstruction.json new file: o/ODM/ODM-2.8.7/tests/assets/sample.json new file: o/ODM/ODM-2.8.7/tests/test_camera.py new file: o/ODM/ODM-2.8.7/tests/test_gcp.py new file: o/ODM/ODM-2.8.7/tests/test_osfm.py new file: o/ODM/ODM-2.8.7/tests/test_remote.py new file: o/ODM/ODM-2.8.7/tests/test_types.py new file: o/ODM/ODM-2.8.7/vcpkg-requirements.txt new file: o/ODM/ODM-2.8.7/win32env.bat new file: o/ODM/ODM-2.8.7/winrun.bat new file: o/ODM/v2.8.7.tar.gz new file: y/Yambo/Yambo-5.1.0-intel-2020a.eb new file: y/Yambo/Yambo-5.1.0-intel-2020a.eb.bak_20220715124556_61837 new file: y/Yambo/Yambo-5.1.0-intel-2021a.eb.old deleted: y/Yambo/Yambo-5.1.0-intel-2021a.eb
144 lines
3.8 KiB
Python
144 lines
3.8 KiB
Python
import os
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import errno
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import json
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import datetime
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import sys
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import subprocess
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import string
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import signal
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import io
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from collections import deque
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from opendm import context
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from opendm import log
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class SubprocessException(Exception):
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def __init__(self, msg, errorCode):
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super().__init__(msg)
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self.errorCode = errorCode
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class ExitException(Exception):
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pass
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def get_ccd_widths():
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"""Return the CCD Width of the camera listed in the JSON defs file."""
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with open(context.ccd_widths_path) as f:
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sensor_data = json.loads(f.read())
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return dict(zip(map(string.lower, sensor_data.keys()), sensor_data.values()))
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running_subprocesses = []
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cleanup_callbacks = []
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def add_cleanup_callback(func):
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global cleanup_callbacks
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cleanup_callbacks.append(func)
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def remove_cleanup_callback(func):
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global cleanup_callbacks
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try:
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cleanup_callbacks.remove(func)
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except ValueError as e:
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log.ODM_EXCEPTION("Tried to remove %s from cleanup_callbacks but got: %s" % (str(func), str(e)))
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def exit_gracefully():
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global running_subprocesses
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global cleanup_callbacks
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log.ODM_WARNING("Caught TERM/INT signal, attempting to exit gracefully...")
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for cb in cleanup_callbacks:
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cb()
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for sp in running_subprocesses:
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log.ODM_WARNING("Sending TERM signal to PID %s..." % sp.pid)
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if sys.platform == 'win32':
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os.kill(sp.pid, signal.CTRL_C_EVENT)
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else:
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os.killpg(os.getpgid(sp.pid), signal.SIGTERM)
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os._exit(1)
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def sighandler(signum, frame):
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exit_gracefully()
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signal.signal(signal.SIGINT, sighandler)
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signal.signal(signal.SIGTERM, sighandler)
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def run(cmd, env_paths=[context.superbuild_bin_path], env_vars={}, packages_paths=context.python_packages_paths):
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"""Run a system command"""
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global running_subprocesses
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log.ODM_INFO('running %s' % cmd)
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env = os.environ.copy()
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sep = ":"
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if sys.platform == 'win32':
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sep = ";"
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if len(env_paths) > 0:
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env["PATH"] = env["PATH"] + sep + sep.join(env_paths)
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if len(packages_paths) > 0:
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env["PYTHONPATH"] = env.get("PYTHONPATH", "") + sep + sep.join(packages_paths)
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for k in env_vars:
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env[k] = str(env_vars[k])
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p = subprocess.Popen(cmd, shell=True, env=env, start_new_session=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT)
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running_subprocesses.append(p)
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lines = deque()
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for line in io.TextIOWrapper(p.stdout):
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print(line, end="")
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lines.append(line.strip())
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if len(lines) == 11:
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lines.popleft()
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retcode = p.wait()
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log.logger.log_json_process(cmd, retcode, list(lines))
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running_subprocesses.remove(p)
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if retcode < 0:
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raise SubprocessException("Child was terminated by signal {}".format(-retcode), -retcode)
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elif retcode > 0:
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raise SubprocessException("Child returned {}".format(retcode), retcode)
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def now():
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"""Return the current time"""
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return datetime.datetime.now().strftime('%a %b %d %H:%M:%S %Z %Y')
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def now_raw():
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return datetime.datetime.now()
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def benchmark(start, benchmarking_file, process):
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"""
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runs a benchmark with a start datetime object
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:return: the running time (delta)
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"""
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# Write to benchmark file
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delta = (datetime.datetime.now() - start).total_seconds()
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with open(benchmarking_file, 'a') as b:
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b.write('%s runtime: %s seconds\n' % (process, delta))
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def mkdir_p(path):
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"""Make a directory including parent directories.
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"""
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try:
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os.makedirs(path)
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except os.error as exc:
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if exc.errno != errno.EEXIST or not os.path.isdir(path):
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raise
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# Python2 shutil.which
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def which(program):
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path=os.getenv('PATH')
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for p in path.split(os.path.pathsep):
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p=os.path.join(p,program)
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if os.path.exists(p) and os.access(p,os.X_OK):
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return p
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