mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
synced 2025-04-07 23:42:12 +01:00

new file: i/IRODS/IRODS-0.7.3.eb new file: l/libxc/libxc-5.1.5-intel-2020a.eb new file: n/NodeODM/NodeODM-2.2.0-GCCcore-11.3.0.eb new file: o/ODM/ODM-2.8.7/.dockerignore new file: o/ODM/ODM-2.8.7/.github/workflows/publish-docker-and-wsl.yaml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-docker-gpu.yaml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-snap.yml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-windows.yml new file: o/ODM/ODM-2.8.7/.github/workflows/test-build-prs.yaml new file: o/ODM/ODM-2.8.7/.gitignore new file: o/ODM/ODM-2.8.7/.gitmodules new file: o/ODM/ODM-2.8.7/CNAME new file: o/ODM/ODM-2.8.7/CONTRIBUTING.md new file: o/ODM/ODM-2.8.7/Dockerfile new file: o/ODM/ODM-2.8.7/LICENSE new file: o/ODM/ODM-2.8.7/README.md new file: o/ODM/ODM-2.8.7/SuperBuild/CMakeLists.txt new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Ceres.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Entwine.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-FPCFilter.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-GFlags.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Hexer.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-LASzip.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-MvsTexturing.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Obj2Tiles.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-OpenCV.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-OpenMVS.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-OpenSfM.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-PCL.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-PDAL.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-PyPopsift.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Untwine.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/ExternalProject-Setup.cmake new file: o/ODM/ODM-2.8.7/VERSION new file: o/ODM/ODM-2.8.7/code_of_conduct.md new file: o/ODM/ODM-2.8.7/configure.py new file: o/ODM/ODM-2.8.7/configure.sh new file: o/ODM/ODM-2.8.7/console.bat new file: o/ODM/ODM-2.8.7/contrib/blender/README.md new file: o/ODM/ODM-2.8.7/contrib/blender/common.py new file: o/ODM/ODM-2.8.7/contrib/blender/odm_photo.py new file: o/ODM/ODM-2.8.7/contrib/blender/odm_video.py new file: o/ODM/ODM-2.8.7/contrib/blender/photo_360.blend new file: o/ODM/ODM-2.8.7/contrib/blender/photo_vr.blend new file: o/ODM/ODM-2.8.7/contrib/grass/README.md new file: o/ODM/ODM-2.8.7/contrib/grass/odm_grass.py new file: o/ODM/ODM-2.8.7/contrib/mergepreview/README.md new file: o/ODM/ODM-2.8.7/contrib/mergepreview/mergepreview.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/README.md new file: o/ODM/ODM-2.8.7/contrib/ndvi/agricultural_indices.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/ndvi.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/rename_sentera_agx710_multispectral_tif.py new file: o/ODM/ODM-2.8.7/contrib/orthorectify/README.md new file: o/ODM/ODM-2.8.7/contrib/orthorectify/orthorectify.py new file: o/ODM/ODM-2.8.7/contrib/orthorectify/run.sh new file: o/ODM/ODM-2.8.7/contrib/pc2dem/README.md new file: o/ODM/ODM-2.8.7/contrib/pc2dem/pc2dem.py new file: o/ODM/ODM-2.8.7/contrib/resize/README.md new file: o/ODM/ODM-2.8.7/contrib/resize/requirements.txt new file: o/ODM/ODM-2.8.7/contrib/resize/resize.py new file: o/ODM/ODM-2.8.7/contrib/shell/odm_exif2utm.sh new file: o/ODM/ODM-2.8.7/contrib/visveg/readme.md new file: o/ODM/ODM-2.8.7/contrib/visveg/vegind.py new file: o/ODM/ODM-2.8.7/docker/README new file: o/ODM/ODM-2.8.7/docker/g++ new file: o/ODM/ODM-2.8.7/docker/gcc new file: o/ODM/ODM-2.8.7/docs/issue_template.md new file: o/ODM/ODM-2.8.7/gpu.Dockerfile new file: o/ODM/ODM-2.8.7/innosetup.iss new file: o/ODM/ODM-2.8.7/licenses/libext_copyright.txt new file: o/ODM/ODM-2.8.7/licenses/libx11_copyright.txt new file: o/ODM/ODM-2.8.7/licenses/license.md new file: o/ODM/ODM-2.8.7/odm_docker_readme.txt new file: o/ODM/ODM-2.8.7/opendm/__init__.py new file: o/ODM/ODM-2.8.7/opendm/boundary.py new file: o/ODM/ODM-2.8.7/opendm/camera.py new file: o/ODM/ODM-2.8.7/opendm/cogeo.py new file: o/ODM/ODM-2.8.7/opendm/concurrency.py new file: o/ODM/ODM-2.8.7/opendm/config.py new file: o/ODM/ODM-2.8.7/opendm/context.py new file: o/ODM/ODM-2.8.7/opendm/cropper.py new file: o/ODM/ODM-2.8.7/opendm/cutline.py new file: o/ODM/ODM-2.8.7/opendm/dem/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/commands.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/types.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/utils.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/distance_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/extended_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/partition_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/grid/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/grid/builder.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/io/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/io/las_io.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/one_partition.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/partition_plan.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/quad_partitions.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/selector.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/surrounding_partitions.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/point_cloud.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/rectify.py new file: o/ODM/ODM-2.8.7/opendm/dem/merge.py new file: o/ODM/ODM-2.8.7/opendm/dem/pdal.py new file: o/ODM/ODM-2.8.7/opendm/dem/utils.py new file: o/ODM/ODM-2.8.7/opendm/dls.py new file: o/ODM/ODM-2.8.7/opendm/entwine.py new file: o/ODM/ODM-2.8.7/opendm/gcp.py new file: o/ODM/ODM-2.8.7/opendm/geo.py new file: o/ODM/ODM-2.8.7/opendm/get_image_size.py new file: o/ODM/ODM-2.8.7/opendm/gpu.py new file: o/ODM/ODM-2.8.7/opendm/gsd.py new file: o/ODM/ODM-2.8.7/opendm/io.py new file: o/ODM/ODM-2.8.7/opendm/location.py new file: o/ODM/ODM-2.8.7/opendm/log.py new file: o/ODM/ODM-2.8.7/opendm/loghelpers.py new file: o/ODM/ODM-2.8.7/opendm/mesh.py new file: o/ODM/ODM-2.8.7/opendm/multispectral.py new file: o/ODM/ODM-2.8.7/opendm/nvm.py new file: o/ODM/ODM-2.8.7/opendm/ogctiles.py new file: o/ODM/ODM-2.8.7/opendm/orthophoto.py new file: o/ODM/ODM-2.8.7/opendm/osfm.py new file: o/ODM/ODM-2.8.7/opendm/photo.py new file: o/ODM/ODM-2.8.7/opendm/point_cloud.py new file: o/ODM/ODM-2.8.7/opendm/progress.py new file: o/ODM/ODM-2.8.7/opendm/pseudogeo.py new file: o/ODM/ODM-2.8.7/opendm/remote.py new file: o/ODM/ODM-2.8.7/opendm/report/dsm_gradient.png new file: o/ODM/ODM-2.8.7/opendm/report/overlap_color_map.txt new file: o/ODM/ODM-2.8.7/opendm/report/overlap_diagram_legend.png new file: o/ODM/ODM-2.8.7/opendm/rollingshutter.py new file: o/ODM/ODM-2.8.7/opendm/shots.py new file: o/ODM/ODM-2.8.7/opendm/system.py new file: o/ODM/ODM-2.8.7/opendm/thermal.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/__init__.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/dji_unpack.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/flir_unpack.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/thermal_utils.py new file: o/ODM/ODM-2.8.7/opendm/tiles/color_relief.txt new file: o/ODM/ODM-2.8.7/opendm/tiles/gdal2tiles.py new file: o/ODM/ODM-2.8.7/opendm/tiles/hsv_merge.py new file: o/ODM/ODM-2.8.7/opendm/tiles/tiler.py new file: o/ODM/ODM-2.8.7/opendm/types.py new file: o/ODM/ODM-2.8.7/opendm/utils.py new file: o/ODM/ODM-2.8.7/opendm/vendor/__init__.py new file: o/ODM/ODM-2.8.7/opendm/vendor/gdal_fillnodata.py new file: o/ODM/ODM-2.8.7/portable.Dockerfile new file: o/ODM/ODM-2.8.7/requirements.txt new file: o/ODM/ODM-2.8.7/run.bat new file: o/ODM/ODM-2.8.7/run.py new file: o/ODM/ODM-2.8.7/run.sh new file: o/ODM/ODM-2.8.7/snap/snapcraft.yaml new file: o/ODM/ODM-2.8.7/snap/snapcraft21.yaml new file: o/ODM/ODM-2.8.7/stages/__init__.py new file: o/ODM/ODM-2.8.7/stages/dataset.py new file: o/ODM/ODM-2.8.7/stages/mvstex.py new file: o/ODM/ODM-2.8.7/stages/odm_app.py new file: o/ODM/ODM-2.8.7/stages/odm_dem.py new file: o/ODM/ODM-2.8.7/stages/odm_filterpoints.py new file: o/ODM/ODM-2.8.7/stages/odm_georeferencing.py new file: o/ODM/ODM-2.8.7/stages/odm_meshing.py new file: o/ODM/ODM-2.8.7/stages/odm_orthophoto.py new file: o/ODM/ODM-2.8.7/stages/odm_postprocess.py new file: o/ODM/ODM-2.8.7/stages/odm_report.py new file: o/ODM/ODM-2.8.7/stages/openmvs.py new file: o/ODM/ODM-2.8.7/stages/run_opensfm.py new file: o/ODM/ODM-2.8.7/stages/splitmerge.py new file: o/ODM/ODM-2.8.7/start-dev-env.sh new file: o/ODM/ODM-2.8.7/test.sh new file: o/ODM/ODM-2.8.7/tests/assets/.gitignore new file: o/ODM/ODM-2.8.7/tests/assets/gcp_extras.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_latlon_south.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_latlon_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_michigan_feet_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_utm_north_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/images/DJI_0002.JPG new file: o/ODM/ODM-2.8.7/tests/assets/reconstruction.json new file: o/ODM/ODM-2.8.7/tests/assets/sample.json new file: o/ODM/ODM-2.8.7/tests/test_camera.py new file: o/ODM/ODM-2.8.7/tests/test_gcp.py new file: o/ODM/ODM-2.8.7/tests/test_osfm.py new file: o/ODM/ODM-2.8.7/tests/test_remote.py new file: o/ODM/ODM-2.8.7/tests/test_types.py new file: o/ODM/ODM-2.8.7/vcpkg-requirements.txt new file: o/ODM/ODM-2.8.7/win32env.bat new file: o/ODM/ODM-2.8.7/winrun.bat new file: o/ODM/v2.8.7.tar.gz new file: y/Yambo/Yambo-5.1.0-intel-2020a.eb new file: y/Yambo/Yambo-5.1.0-intel-2020a.eb.bak_20220715124556_61837 new file: y/Yambo/Yambo-5.1.0-intel-2021a.eb.old deleted: y/Yambo/Yambo-5.1.0-intel-2021a.eb
100 lines
2.9 KiB
Python
100 lines
2.9 KiB
Python
from vmem import virtual_memory
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import os
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import sys
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try:
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import Queue as queue
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except:
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import queue
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import threading
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import time
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from opendm import log
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def get_max_memory(minimum = 5, use_at_most = 0.5):
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"""
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:param minimum minimum value to return (return value will never be lower than this)
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:param use_at_most use at most this fraction of the available memory. 0.5 = use at most 50% of available memory
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:return percentage value of memory to use (75 = 75%).
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"""
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return max(minimum, (100 - virtual_memory().percent) * use_at_most)
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def get_max_memory_mb(minimum = 100, use_at_most = 0.5):
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"""
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:param minimum minimum value to return (return value will never be lower than this)
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:param use_at_most use at most this fraction of the available memory. 0.5 = use at most 50% of available memory
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:return value of memory to use in megabytes.
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"""
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return max(minimum, (virtual_memory().available / 1024 / 1024) * use_at_most)
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def parallel_map(func, items, max_workers=1, single_thread_fallback=True):
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"""
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Our own implementation for parallel processing
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which handles gracefully CTRL+C and reverts to
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single thread processing in case of errors
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:param items list of objects
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:param func function to execute on each object
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"""
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global error
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error = None
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def process_one(q):
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func(q)
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def worker():
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global error
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while True:
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(num, q) = pq.get()
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if q is None or error is not None:
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pq.task_done()
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break
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try:
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process_one(q)
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except Exception as e:
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error = e
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finally:
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pq.task_done()
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if max_workers > 1:
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use_single_thread = False
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pq = queue.PriorityQueue()
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threads = []
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for i in range(max_workers):
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t = threading.Thread(target=worker)
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t.start()
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threads.append(t)
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i = 1
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for t in items:
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pq.put((i, t.copy()))
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i += 1
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def stop_workers():
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for i in range(len(threads)):
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pq.put((-1, None))
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for t in threads:
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t.join()
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# block until all tasks are done
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try:
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while pq.unfinished_tasks > 0:
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time.sleep(0.5)
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except KeyboardInterrupt:
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print("CTRL+C terminating...")
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stop_workers()
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sys.exit(1)
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stop_workers()
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if error is not None and single_thread_fallback:
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# Try to reprocess using a single thread
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# in case this was a memory error
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log.ODM_WARNING("Failed to run process in parallel, retrying with a single thread...")
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use_single_thread = True
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else:
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use_single_thread = True
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if use_single_thread:
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# Boring, single thread processing
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for q in items:
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process_one(q) |