mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
synced 2025-04-07 23:42:12 +01:00

new file: i/IRODS/IRODS-0.7.3.eb new file: l/libxc/libxc-5.1.5-intel-2020a.eb new file: n/NodeODM/NodeODM-2.2.0-GCCcore-11.3.0.eb new file: o/ODM/ODM-2.8.7/.dockerignore new file: o/ODM/ODM-2.8.7/.github/workflows/publish-docker-and-wsl.yaml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-docker-gpu.yaml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-snap.yml new file: o/ODM/ODM-2.8.7/.github/workflows/publish-windows.yml new file: o/ODM/ODM-2.8.7/.github/workflows/test-build-prs.yaml new file: o/ODM/ODM-2.8.7/.gitignore new file: o/ODM/ODM-2.8.7/.gitmodules new file: o/ODM/ODM-2.8.7/CNAME new file: o/ODM/ODM-2.8.7/CONTRIBUTING.md new file: o/ODM/ODM-2.8.7/Dockerfile new file: o/ODM/ODM-2.8.7/LICENSE new file: o/ODM/ODM-2.8.7/README.md new file: o/ODM/ODM-2.8.7/SuperBuild/CMakeLists.txt new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Ceres.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Entwine.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-FPCFilter.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-GFlags.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Hexer.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-LASzip.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-MvsTexturing.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Obj2Tiles.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-OpenCV.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-OpenMVS.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-OpenSfM.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-PCL.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-PDAL.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-PyPopsift.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/External-Untwine.cmake new file: o/ODM/ODM-2.8.7/SuperBuild/cmake/ExternalProject-Setup.cmake new file: o/ODM/ODM-2.8.7/VERSION new file: o/ODM/ODM-2.8.7/code_of_conduct.md new file: o/ODM/ODM-2.8.7/configure.py new file: o/ODM/ODM-2.8.7/configure.sh new file: o/ODM/ODM-2.8.7/console.bat new file: o/ODM/ODM-2.8.7/contrib/blender/README.md new file: o/ODM/ODM-2.8.7/contrib/blender/common.py new file: o/ODM/ODM-2.8.7/contrib/blender/odm_photo.py new file: o/ODM/ODM-2.8.7/contrib/blender/odm_video.py new file: o/ODM/ODM-2.8.7/contrib/blender/photo_360.blend new file: o/ODM/ODM-2.8.7/contrib/blender/photo_vr.blend new file: o/ODM/ODM-2.8.7/contrib/grass/README.md new file: o/ODM/ODM-2.8.7/contrib/grass/odm_grass.py new file: o/ODM/ODM-2.8.7/contrib/mergepreview/README.md new file: o/ODM/ODM-2.8.7/contrib/mergepreview/mergepreview.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/README.md new file: o/ODM/ODM-2.8.7/contrib/ndvi/agricultural_indices.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/ndvi.py new file: o/ODM/ODM-2.8.7/contrib/ndvi/rename_sentera_agx710_multispectral_tif.py new file: o/ODM/ODM-2.8.7/contrib/orthorectify/README.md new file: o/ODM/ODM-2.8.7/contrib/orthorectify/orthorectify.py new file: o/ODM/ODM-2.8.7/contrib/orthorectify/run.sh new file: o/ODM/ODM-2.8.7/contrib/pc2dem/README.md new file: o/ODM/ODM-2.8.7/contrib/pc2dem/pc2dem.py new file: o/ODM/ODM-2.8.7/contrib/resize/README.md new file: o/ODM/ODM-2.8.7/contrib/resize/requirements.txt new file: o/ODM/ODM-2.8.7/contrib/resize/resize.py new file: o/ODM/ODM-2.8.7/contrib/shell/odm_exif2utm.sh new file: o/ODM/ODM-2.8.7/contrib/visveg/readme.md new file: o/ODM/ODM-2.8.7/contrib/visveg/vegind.py new file: o/ODM/ODM-2.8.7/docker/README new file: o/ODM/ODM-2.8.7/docker/g++ new file: o/ODM/ODM-2.8.7/docker/gcc new file: o/ODM/ODM-2.8.7/docs/issue_template.md new file: o/ODM/ODM-2.8.7/gpu.Dockerfile new file: o/ODM/ODM-2.8.7/innosetup.iss new file: o/ODM/ODM-2.8.7/licenses/libext_copyright.txt new file: o/ODM/ODM-2.8.7/licenses/libx11_copyright.txt new file: o/ODM/ODM-2.8.7/licenses/license.md new file: o/ODM/ODM-2.8.7/odm_docker_readme.txt new file: o/ODM/ODM-2.8.7/opendm/__init__.py new file: o/ODM/ODM-2.8.7/opendm/boundary.py new file: o/ODM/ODM-2.8.7/opendm/camera.py new file: o/ODM/ODM-2.8.7/opendm/cogeo.py new file: o/ODM/ODM-2.8.7/opendm/concurrency.py new file: o/ODM/ODM-2.8.7/opendm/config.py new file: o/ODM/ODM-2.8.7/opendm/context.py new file: o/ODM/ODM-2.8.7/opendm/cropper.py new file: o/ODM/ODM-2.8.7/opendm/cutline.py new file: o/ODM/ODM-2.8.7/opendm/dem/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/commands.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/types.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/bounds/utils.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/distance_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/extended_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/extra_dimensions/partition_dimension.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/grid/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/grid/builder.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/io/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/io/las_io.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/__init__.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/one_partition.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/partition_plan.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/quad_partitions.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/selector.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/partition/surrounding_partitions.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/point_cloud.py new file: o/ODM/ODM-2.8.7/opendm/dem/ground_rectification/rectify.py new file: o/ODM/ODM-2.8.7/opendm/dem/merge.py new file: o/ODM/ODM-2.8.7/opendm/dem/pdal.py new file: o/ODM/ODM-2.8.7/opendm/dem/utils.py new file: o/ODM/ODM-2.8.7/opendm/dls.py new file: o/ODM/ODM-2.8.7/opendm/entwine.py new file: o/ODM/ODM-2.8.7/opendm/gcp.py new file: o/ODM/ODM-2.8.7/opendm/geo.py new file: o/ODM/ODM-2.8.7/opendm/get_image_size.py new file: o/ODM/ODM-2.8.7/opendm/gpu.py new file: o/ODM/ODM-2.8.7/opendm/gsd.py new file: o/ODM/ODM-2.8.7/opendm/io.py new file: o/ODM/ODM-2.8.7/opendm/location.py new file: o/ODM/ODM-2.8.7/opendm/log.py new file: o/ODM/ODM-2.8.7/opendm/loghelpers.py new file: o/ODM/ODM-2.8.7/opendm/mesh.py new file: o/ODM/ODM-2.8.7/opendm/multispectral.py new file: o/ODM/ODM-2.8.7/opendm/nvm.py new file: o/ODM/ODM-2.8.7/opendm/ogctiles.py new file: o/ODM/ODM-2.8.7/opendm/orthophoto.py new file: o/ODM/ODM-2.8.7/opendm/osfm.py new file: o/ODM/ODM-2.8.7/opendm/photo.py new file: o/ODM/ODM-2.8.7/opendm/point_cloud.py new file: o/ODM/ODM-2.8.7/opendm/progress.py new file: o/ODM/ODM-2.8.7/opendm/pseudogeo.py new file: o/ODM/ODM-2.8.7/opendm/remote.py new file: o/ODM/ODM-2.8.7/opendm/report/dsm_gradient.png new file: o/ODM/ODM-2.8.7/opendm/report/overlap_color_map.txt new file: o/ODM/ODM-2.8.7/opendm/report/overlap_diagram_legend.png new file: o/ODM/ODM-2.8.7/opendm/rollingshutter.py new file: o/ODM/ODM-2.8.7/opendm/shots.py new file: o/ODM/ODM-2.8.7/opendm/system.py new file: o/ODM/ODM-2.8.7/opendm/thermal.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/__init__.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/dji_unpack.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/flir_unpack.py new file: o/ODM/ODM-2.8.7/opendm/thermal_tools/thermal_utils.py new file: o/ODM/ODM-2.8.7/opendm/tiles/color_relief.txt new file: o/ODM/ODM-2.8.7/opendm/tiles/gdal2tiles.py new file: o/ODM/ODM-2.8.7/opendm/tiles/hsv_merge.py new file: o/ODM/ODM-2.8.7/opendm/tiles/tiler.py new file: o/ODM/ODM-2.8.7/opendm/types.py new file: o/ODM/ODM-2.8.7/opendm/utils.py new file: o/ODM/ODM-2.8.7/opendm/vendor/__init__.py new file: o/ODM/ODM-2.8.7/opendm/vendor/gdal_fillnodata.py new file: o/ODM/ODM-2.8.7/portable.Dockerfile new file: o/ODM/ODM-2.8.7/requirements.txt new file: o/ODM/ODM-2.8.7/run.bat new file: o/ODM/ODM-2.8.7/run.py new file: o/ODM/ODM-2.8.7/run.sh new file: o/ODM/ODM-2.8.7/snap/snapcraft.yaml new file: o/ODM/ODM-2.8.7/snap/snapcraft21.yaml new file: o/ODM/ODM-2.8.7/stages/__init__.py new file: o/ODM/ODM-2.8.7/stages/dataset.py new file: o/ODM/ODM-2.8.7/stages/mvstex.py new file: o/ODM/ODM-2.8.7/stages/odm_app.py new file: o/ODM/ODM-2.8.7/stages/odm_dem.py new file: o/ODM/ODM-2.8.7/stages/odm_filterpoints.py new file: o/ODM/ODM-2.8.7/stages/odm_georeferencing.py new file: o/ODM/ODM-2.8.7/stages/odm_meshing.py new file: o/ODM/ODM-2.8.7/stages/odm_orthophoto.py new file: o/ODM/ODM-2.8.7/stages/odm_postprocess.py new file: o/ODM/ODM-2.8.7/stages/odm_report.py new file: o/ODM/ODM-2.8.7/stages/openmvs.py new file: o/ODM/ODM-2.8.7/stages/run_opensfm.py new file: o/ODM/ODM-2.8.7/stages/splitmerge.py new file: o/ODM/ODM-2.8.7/start-dev-env.sh new file: o/ODM/ODM-2.8.7/test.sh new file: o/ODM/ODM-2.8.7/tests/assets/.gitignore new file: o/ODM/ODM-2.8.7/tests/assets/gcp_extras.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_latlon_south.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_latlon_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_michigan_feet_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/gcp_utm_north_valid.txt new file: o/ODM/ODM-2.8.7/tests/assets/images/DJI_0002.JPG new file: o/ODM/ODM-2.8.7/tests/assets/reconstruction.json new file: o/ODM/ODM-2.8.7/tests/assets/sample.json new file: o/ODM/ODM-2.8.7/tests/test_camera.py new file: o/ODM/ODM-2.8.7/tests/test_gcp.py new file: o/ODM/ODM-2.8.7/tests/test_osfm.py new file: o/ODM/ODM-2.8.7/tests/test_remote.py new file: o/ODM/ODM-2.8.7/tests/test_types.py new file: o/ODM/ODM-2.8.7/vcpkg-requirements.txt new file: o/ODM/ODM-2.8.7/win32env.bat new file: o/ODM/ODM-2.8.7/winrun.bat new file: o/ODM/v2.8.7.tar.gz new file: y/Yambo/Yambo-5.1.0-intel-2020a.eb new file: y/Yambo/Yambo-5.1.0-intel-2020a.eb.bak_20220715124556_61837 new file: y/Yambo/Yambo-5.1.0-intel-2021a.eb.old deleted: y/Yambo/Yambo-5.1.0-intel-2021a.eb
218 lines
6.4 KiB
Bash
Executable File
218 lines
6.4 KiB
Bash
Executable File
#!/bin/bash
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# Ensure the DEBIAN_FRONTEND environment variable is set for apt-get calls
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APT_GET="env DEBIAN_FRONTEND=noninteractive $(command -v apt-get)"
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check_version(){
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UBUNTU_VERSION=$(lsb_release -r)
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case "$UBUNTU_VERSION" in
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*"20.04"*|*"21.04"*)
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echo "Ubuntu: $UBUNTU_VERSION, good!"
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;;
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*"18.04"*|*"16.04"*)
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echo "ODM 2.1 has upgraded to Ubuntu 21.04, but you're on $UBUNTU_VERSION"
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echo "* The last version of ODM that supports Ubuntu 16.04 is v1.0.2."
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echo "* The last version of ODM that supports Ubuntu 18.04 is v2.0.0."
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echo "We recommend you to upgrade, or better yet, use docker."
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exit 1
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;;
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*)
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echo "You are not on Ubuntu 21.04 (detected: $UBUNTU_VERSION)"
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echo "It might be possible to run ODM on a newer version of Ubuntu, however, you cannot rely on this script."
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exit 1
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;;
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esac
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}
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if [[ $2 =~ ^[0-9]+$ ]] ; then
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processes=$2
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else
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processes=$(nproc)
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fi
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ensure_prereqs() {
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export DEBIAN_FRONTEND=noninteractive
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if ! command -v sudo &> /dev/null; then
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echo "Installing sudo"
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$APT_GET update
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$APT_GET install -y -qq --no-install-recommends sudo
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else
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sudo $APT_GET update
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fi
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if ! command -v lsb_release &> /dev/null; then
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echo "Installing lsb_release"
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sudo $APT_GET install -y -qq --no-install-recommends lsb-release
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fi
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if ! command -v pkg-config &> /dev/null; then
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echo "Installing pkg-config"
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sudo $APT_GET install -y -qq --no-install-recommends pkg-config
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fi
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echo "Installing tzdata"
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sudo $APT_GET install -y -qq tzdata
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UBUNTU_VERSION=$(lsb_release -r)
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if [[ "$UBUNTU_VERSION" == *"20.04"* ]]; then
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echo "Enabling PPA for Ubuntu GIS"
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sudo $APT_GET install -y -qq --no-install-recommends software-properties-common
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sudo add-apt-repository -y ppa:ubuntugis/ubuntugis-unstable
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sudo $APT_GET update
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fi
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echo "Installing Python PIP"
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sudo $APT_GET install -y -qq --no-install-recommends \
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python3-pip \
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python3-setuptools
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sudo pip3 install -U pip
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sudo pip3 install -U shyaml
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}
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# Save all dependencies in snapcraft.yaml to maintain a single source of truth.
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# Maintaining multiple lists will otherwise be painful.
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installdepsfromsnapcraft() {
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section="$2"
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case "$1" in
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build) key=build-packages; ;;
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runtime) key=stage-packages; ;;
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*) key=build-packages; ;; # shouldn't be needed, but it's here just in case
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esac
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UBUNTU_VERSION=$(lsb_release -r)
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SNAPCRAFT_FILE="snapcraft.yaml"
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if [[ "$UBUNTU_VERSION" == *"21.04"* ]]; then
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SNAPCRAFT_FILE="snapcraft21.yaml"
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fi
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cat snap/$SNAPCRAFT_FILE | \
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shyaml get-values-0 parts.$section.$key | \
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xargs -0 sudo $APT_GET install -y -qq --no-install-recommends
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}
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installruntimedepsonly() {
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echo "Installing runtime dependencies"
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ensure_prereqs
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check_version
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echo "Installing Required Requisites"
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installdepsfromsnapcraft runtime prereqs
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echo "Installing OpenCV Dependencies"
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installdepsfromsnapcraft runtime opencv
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echo "Installing OpenSfM Dependencies"
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installdepsfromsnapcraft runtime opensfm
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echo "Installing OpenMVS Dependencies"
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installdepsfromsnapcraft runtime openmvs
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}
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installreqs() {
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cd /code
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## Set up library paths
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export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$RUNPATH/SuperBuild/install/lib
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## Before installing
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echo "Updating the system"
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ensure_prereqs
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check_version
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echo "Installing Required Requisites"
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installdepsfromsnapcraft build prereqs
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echo "Installing OpenCV Dependencies"
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installdepsfromsnapcraft build opencv
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echo "Installing OpenSfM Dependencies"
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installdepsfromsnapcraft build opensfm
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echo "Installing OpenMVS Dependencies"
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installdepsfromsnapcraft build openmvs
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set -e
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pip install --ignore-installed -r requirements.txt
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#if [ ! -z "$GPU_INSTALL" ]; then
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#fi
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set +e
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}
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install() {
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installreqs
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if [ ! -z "$PORTABLE_INSTALL" ]; then
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echo "Replacing g++ and gcc with our scripts for portability..."
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if [ ! -e /usr/bin/gcc_real ]; then
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sudo mv -v /usr/bin/gcc /usr/bin/gcc_real
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sudo cp -v ./docker/gcc /usr/bin/gcc
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fi
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if [ ! -e /usr/bin/g++_real ]; then
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sudo mv -v /usr/bin/g++ /usr/bin/g++_real
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sudo cp -v ./docker/g++ /usr/bin/g++
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fi
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fi
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set -eo pipefail
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echo "Compiling SuperBuild"
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cd ${RUNPATH}/SuperBuild
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mkdir -p build && cd build
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cmake .. && make -j$processes
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echo "Configuration Finished"
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}
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uninstall() {
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check_version
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echo "Removing SuperBuild and build directories"
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cd ${RUNPATH}/SuperBuild
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rm -rfv build src download install
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cd ../
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rm -rfv build
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}
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reinstall() {
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check_version
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echo "Reinstalling ODM modules"
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uninstall
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install
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}
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clean() {
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rm -rf \
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${RUNPATH}/SuperBuild/build \
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${RUNPATH}/SuperBuild/download \
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${RUNPATH}/SuperBuild/src
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# find in /code and delete static libraries and intermediate object files
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find ${RUNPATH} -type f -name "*.a" -delete -or -type f -name "*.o" -delete
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}
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usage() {
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echo "Usage:"
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echo "bash configure.sh <install|update|uninstall|installreqs|help> [nproc]"
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echo "Subcommands:"
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echo " install"
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echo " Installs all dependencies and modules for running OpenDroneMap"
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echo " installruntimedepsonly"
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echo " Installs *only* the runtime libraries (used by docker builds). To build from source, use the 'install' command."
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echo " reinstall"
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echo " Removes SuperBuild and build modules, then re-installs them. Note this does not update OpenDroneMap to the latest version. "
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echo " uninstall"
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echo " Removes SuperBuild and build modules. Does not uninstall dependencies"
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echo " installreqs"
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echo " Only installs the requirements (does not build SuperBuild)"
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echo " clean"
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echo " Cleans the SuperBuild directory by removing temporary files. "
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echo " help"
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echo " Displays this message"
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echo "[nproc] is an optional argument that can set the number of processes for the make -j tag. By default it uses $(nproc)"
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}
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|
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if [[ $1 =~ ^(install|installruntimedepsonly|reinstall|uninstall|installreqs|clean)$ ]]; then
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RUNPATH="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
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"$1"
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else
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|
echo "Invalid instructions." >&2
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usage
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exit 1
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fi
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