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48 lines
1.8 KiB
Plaintext
48 lines
1.8 KiB
Plaintext
##
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# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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#
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# Copyright:: Copyright 2012-2014 Uni.Lu/LCSB, NTUA
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# Authors:: Cedric Laczny <cedric.laczny@uni.lu>, Fotis Georgatos <fotis@cern.ch>
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# License:: MIT/GPL
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# $Id$
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#
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# This work implements a part of the HPCBIOS project and is a component of the policy:
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# http://hpcbios.readthedocs.org/en/latest/HPCBIOS_2012-94.html
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##
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easyblock = 'ConfigureMake'
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name = 'ViennaRNA'
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version = '2.0.7'
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homepage = 'http://www.tbi.univie.ac.at/~ronny/RNA/vrna2.html'
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description = """The Vienna RNA Package consists of a C code library and several
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stand-alone programs for the prediction and comparison of RNA secondary structures."""
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toolchain = {'name': 'ictce', 'version': '5.3.0'}
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toolchainopts = {'optarch': True, 'pic': True}
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sources = [SOURCE_TAR_GZ]
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source_urls = ['http://www.tbi.univie.ac.at/~ronny/RNA']
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patches = ['ViennaRNA_ictce-pragma.patch']
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# Prevents the "make install" step from trying to copy to _global_ perl dir and thus make easybuild fail.
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configopts = '--without-perl'
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# Alternatively, you may want to use the following to copy the perl-module to a "local" directory
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# Code NOT yet tested, therefor left here for future recycling
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#preconfigopts = 'env PERLPREFIX="/path/where/the/perl/module/shoud/go"'
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sanity_check_paths = {
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'files': ['bin/RNA%s' % x for x in ['fold', 'eval', 'heat', 'pdist', 'distance',
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'inverse', 'plot', 'subopt', 'Lfold', 'cofold',
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'paln', 'duplex', 'alifold', 'plfold', 'up',
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'aliduplex', 'Lalifold', '2Dfold', 'parconv',
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'PKplex', 'plex', 'snoop', 'forester']] +
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['bin/Kinfold'],
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'dirs': []
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}
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moduleclass = 'bio'
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