mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
synced 2025-04-14 02:41:22 +01:00

new file: c/Cube/Cube-4.4.3-intel-2017a.eb new file: c/Cube/Cube-4.4.3-intel-2018a.eb new file: c/Cube/Cube-4.4.3-intel-2019.02.eb new file: c/CubeGUI/CubeGUI-4.4.3-gompi.2019.03.eb new file: c/CubeGUI/CubeGUI-4.4.3-intel-2017a.eb new file: c/CubeGUI/CubeGUI-4.4.3-intel-2018a.eb new file: c/CubeGUI/CubeGUI-4.4.3-intel-2019.02.eb new file: c/CubeLib/CubeLib-4.4.3-gompi-2019.03.eb new file: c/CubeLib/CubeLib-4.4.3-intel-2017a.eb new file: c/CubeLib/CubeLib-4.4.3-intel-2018a.eb new file: c/CubeLib/CubeLib-4.4.3-intel-2019.02.eb new file: c/CubeW/CubeW-4.4.2-gompi-2019.03.eb new file: c/CubeW/CubeW-4.4.2-intel-2017a.eb new file: c/CubeW/CubeW-4.4.2-intel-2018a.eb new file: c/CubeW/CubeW-4.4.2-intel-2019.02.eb new file: g/gompi/gompi-2019.03.eb new file: q/Qualimap/Qualimap-2.2.1-intel-2017a.eb modified: r/R/R-3.5.3-intel-2017a.eb modified: t/Trilinos/Trilinos-12.14.1-intel-2017c-Py-2.7.eb new file: t/Trilinos/Trilinos-12.14.1-thyra_test.patch deleted: q/Qualimap/Qualimap-2.2.1.eb deleted: r/R/Makevars deleted: r/R/R-3.5.3-intel-2017a.old
31 lines
755 B
Plaintext
31 lines
755 B
Plaintext
# IT4Innovations 2019
|
|
|
|
easyblock = "Tarball"
|
|
|
|
name = 'Qualimap'
|
|
version = '2.2.1'
|
|
|
|
homepage = 'http://qualimap.bioinfo.cipf.es/'
|
|
description = """Qualimap 2 is a platform-independent application written in
|
|
Java and R that provides both a Graphical User Inteface (GUI) and a command-line
|
|
interface to facilitate the quality control of alignment sequencing data and its
|
|
derivatives like feature counts."""
|
|
|
|
toolchain = {'name': 'intel', 'version': '2017a'}
|
|
|
|
sources = ['qualimap_v%(version)s.zip']
|
|
source_urls = ['https://bitbucket.org/kokonech/qualimap/downloads']
|
|
|
|
dependencies = [
|
|
('R', '3.5.3'),
|
|
]
|
|
|
|
modextrapaths = {"PATH": '.'}
|
|
|
|
sanity_check_paths = {
|
|
'files': ['qualimap'],
|
|
'dirs': ['lib', 'scripts', 'species'],
|
|
}
|
|
|
|
moduleclass = 'bio'
|