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new file: b/Boost/Boost-1.68.0-intel-2017a.eb new file: b/Boost/Boost-1.68.0-intel-2017c.eb new file: "b/bcl2fastq2/\\" new file: b/bcl2fastq2/bcl2fastq2-2.20.0-intel-2017a-Py-2.7.eb new file: b/bcl2fastq2/bcl2fastq2-2.20.0-intel-2017a-Py-3.6.eb modified: d/DIRAC/DIRAC-18.0-intel-2017c-Py-2.7-test.eb new file: f/FastQC/FastQC-0.11.3.eb new file: f/FastQC/FastQC-0.11.8.eb new file: f/fontconfig/fontconfig-2.13.0-libpng-1.6.34.eb new file: g/GATK/GATK-4.1.2.0-Java-1.8.0_202.eb new file: g/GDAL/GDAL-2.4.0-intel-2017a-Py-3.6.eb new file: g/GEOS/GEOS-3.7.2-Py-3.6.eb new file: g/gnuplot/gnuplot-5.2.7-GCC-6.3.0-2.27.eb modified: h/HTSlib/HTSlib-1.6-intel-2017a.eb new file: l/libMesh/libMesh-1.4.1-intel-2017a.eb new file: l/libMesh/libMesh-1.4.1-intel-2017c.eb new file: m/MUMPS/MUMPS-5.2.0-intel-2017c-parmetis.eb modified: p/Python/Python-3.6.8-GCC-6.3.0-2.27-base.eb new file: r/R/R-3.5.3-intel-2017a-Py-3.6.eb modified: s/SAMtools/SAMtools-1.6-intel-2017a.eb new file: s/SWIG/SWIG-3.0.12-Py-3.6.eb deleted: b/bcl2fastq2/bcl2fastq2-2.20.0-intel-2017a-Python-2.7.13.eb
52 lines
1.9 KiB
Plaintext
52 lines
1.9 KiB
Plaintext
# ITInnovations 2018
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#
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# Error in SWIG build, finished by hand
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easyblock = 'ConfigureMake'
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name = 'GDAL'
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version = '2.4.0'
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versionsuffix = '-Py-3.6'
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homepage = 'http://www.gdal.org/'
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description = """GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style
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Open Source license by the Open Source Geospatial Foundation. As a library, it presents a single abstract data model
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to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for
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data translation and processing."""
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toolchain = {'name': 'intel', 'version': '2017a'}
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toolchainopts = {'usempi': True}
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source_urls = ['http://download.osgeo.org/gdal/%(version)s/']
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sources = [SOURCELOWER_TAR_XZ]
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dependencies = [
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('Py', '3.6', '', True),
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('netCDF', '4.6.3'),
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('expat', '2.2.6', '', True),
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('GEOS', '3.7.2', '', ('Py', '3.6')),
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('SQLite', '3.27.1', '', True),
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('libxml2', '2.9.9', '', True),
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('libpng', '1.6.34', '', True),
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('libjpeg-turbo', '1.5.3', '', True),
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('JasPer', '2.0.14', '', True),
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('LibTIFF', '4.0.7', '', True),
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('zlib', '1.2.11', '', True),
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('cURL', '7.56.1', '', True),
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('PCRE', '8.42','', True),
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('PROJ', '5.0.0'),
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]
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configopts = '--with-expat=$EBROOTEXPAT --with-libz=$EBROOTLIBZ --with-hdf5=$EBROOTHDF5 --with-netcdf=$EBROOTNETCDF'
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configopts += ' --with-xml2=$EBROOTLIBXML2 --with-geos=$EBROOTGEOS/bin/geos-config --with-jpeg=$EBROOTLIBJPEGMINTURBO'
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configopts += ' --with-png=$EBROOTLIBPNG --with-sqlite3=$EBROOTSQLITE --with-jasper=$EBROOTJASPER'
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configopts += ' --with-libtiff=$EBROOTLIBTIFF --with-pcre=$EBROOTPCRE --with-python=$EBROOTPYTHON/bin/python'
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modextrapaths = {'PYTHONPATH': 'lib/python2.7/site-packages'}
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sanity_check_paths = {
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'files': ['lib/libgdal.a', 'lib/libgdal.%s' % SHLIB_EXT],
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'dirs': ['bin', 'include', 'lib/python3.6/site-packages']
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}
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moduleclass = 'data'
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