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56 lines
1.2 KiB
Plaintext
56 lines
1.2 KiB
Plaintext
##
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# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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#
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# Copyright:: Copyright 2012-2013 The Cyprus Institute
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# Authors:: Andreas Panteli <a.panteli@cyi.ac.cy>, Thekla Loizou <t.loizou@cyi.ac.cy>
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# License:: MIT/GPL
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#
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##
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name = 'BLAT'
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version = '3.5'
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homepage = 'http://genome.ucsc.edu/FAQ/FAQblat.html'
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description = "BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more."
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toolchain = {'name': 'goolf', 'version': '1.4.10'}
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sources = ['%%(namelower)sSrc%s.zip' % ''.join(version.split('.'))]
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source_urls = ['http://users.soe.ucsc.edu/~kent/src']
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dependencies = [('libpng', '1.6.2')]
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buildopts = 'CC="$CC" COPT= L="$LIBS"'
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files_to_copy = [
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"bin",
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"blat",
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"gfClient",
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"gfServer",
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"hg",
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"inc",
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"jkOwnLib",
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"lib",
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"utils",
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"webBlat"]
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sanity_check_paths = {
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'files': [
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"bin/%s" %
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x for x in [
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'blat',
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'faToNib',
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'faToTwoBit',
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'gfClient',
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'gfServer',
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'nibFrag',
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'pslPretty',
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'pslReps',
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'pslSort',
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'twoBitInfo',
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'twoBitToFa']],
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'dirs': files_to_copy,
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}
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moduleclass = 'bio'
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