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new file: a/ASE/ASE-3.15.0-Python-2.7.13-base-test.eb new file: a/ASE/ASE-3.15.0-Python-3.6.4-base-test.eb new file: b/Bash/Bash-4.4-GCC-6.3.0-2.27.eb new file: b/Bash/Bash-4.4-intel-2017b.eb new file: b/Boost/Boost-1.66.0-foss-2018a-Py-2.7.eb new file: f/foss/foss-2018a.eb new file: n/numpy/numpy-1.14.1-Py-3.6.eb new file: n/numpy/numpy-1.14.1-mkl.patch new file: o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27.eb new file: s/SQLite/SQLite-3.21.0.eb
30 lines
767 B
Plaintext
30 lines
767 B
Plaintext
easyblock = 'ConfigureMake'
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name = 'ABySS'
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version = '2.0.2'
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homepage = 'http://www.bcgsc.ca/platform/bioinfo/software/abyss'
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description = """Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler"""
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toolchain = {'name': 'foss', 'version': '2018a'}
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toolchainopts = {'usempi': True}
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source_urls = ['https://github.com/bcgsc/abyss/releases/download/%(version)s/']
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sources = [SOURCELOWER_TAR_GZ]
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checksums = ['d87b76edeac3a6fb48f24a1d63f243d8278a324c9a5eb29027b640f7089422df']
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dependencies = [
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('Boost', '1.66.0', '-Py-2.7'),
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('sparsehash', '2.0.3'),
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('SQLite', '3.21.0', '', True),
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]
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configopts = " --enable-maxk=256 "
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sanity_check_paths = {
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'files': ["bin/ABYSS", "bin/ABYSS-P"],
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'dirs': []
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}
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moduleclass = 'bio'
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