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35 lines
988 B
Plaintext
35 lines
988 B
Plaintext
# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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# Author: Pablo Escobar Lopez
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# Swiss Institute of Bioinformatics
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# Biozentrum - University of Basel
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easyblock = 'Tarball'
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name = 'Trimmomatic'
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version = '0.35'
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homepage = 'http://www.usadellab.org/cms/?page=trimmomatic'
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description = """Trimmomatic performs a variety of useful trimming tasks for illumina
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paired-end and single ended data.The selection of trimming steps and their associated
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parameters are supplied on the command line. """
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toolchain = SYSTEM
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source_urls = [
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'http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/']
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sources = [SOURCE_ZIP]
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java = 'Java'
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javaver = '1.7.0_79'
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versionsuffix = '-%s-%s' % (java, javaver)
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dependencies = [(java, javaver)]
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modloadmsg = """To execute Trimmomatic run: java -jar \\$EBROOTTRIMMOMATIC/trimmomatic-%(version)s.jar"""
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sanity_check_paths = {
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'files': ["trimmomatic-%(version)s.jar"],
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'dirs': [""],
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}
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moduleclass = 'bio'
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