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new file: b/Boost/Boost-1.68.0-intel-2017a.eb new file: b/Boost/Boost-1.68.0-intel-2017c.eb new file: "b/bcl2fastq2/\\" new file: b/bcl2fastq2/bcl2fastq2-2.20.0-intel-2017a-Py-2.7.eb new file: b/bcl2fastq2/bcl2fastq2-2.20.0-intel-2017a-Py-3.6.eb modified: d/DIRAC/DIRAC-18.0-intel-2017c-Py-2.7-test.eb new file: f/FastQC/FastQC-0.11.3.eb new file: f/FastQC/FastQC-0.11.8.eb new file: f/fontconfig/fontconfig-2.13.0-libpng-1.6.34.eb new file: g/GATK/GATK-4.1.2.0-Java-1.8.0_202.eb new file: g/GDAL/GDAL-2.4.0-intel-2017a-Py-3.6.eb new file: g/GEOS/GEOS-3.7.2-Py-3.6.eb new file: g/gnuplot/gnuplot-5.2.7-GCC-6.3.0-2.27.eb modified: h/HTSlib/HTSlib-1.6-intel-2017a.eb new file: l/libMesh/libMesh-1.4.1-intel-2017a.eb new file: l/libMesh/libMesh-1.4.1-intel-2017c.eb new file: m/MUMPS/MUMPS-5.2.0-intel-2017c-parmetis.eb modified: p/Python/Python-3.6.8-GCC-6.3.0-2.27-base.eb new file: r/R/R-3.5.3-intel-2017a-Py-3.6.eb modified: s/SAMtools/SAMtools-1.6-intel-2017a.eb new file: s/SWIG/SWIG-3.0.12-Py-3.6.eb deleted: b/bcl2fastq2/bcl2fastq2-2.20.0-intel-2017a-Python-2.7.13.eb
30 lines
693 B
Plaintext
30 lines
693 B
Plaintext
# IT4Innovations 2019
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easyblock = 'ConfigureMake'
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name = 'HTSlib'
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version = '1.6'
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homepage = "http://www.htslib.org/"
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description = """ A C library for reading/writing high-throughput sequencing data.
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This package includes the utilities bgzip and tabix """
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toolchain = {'name': 'intel', 'version': '2017a'}
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source_urls = [
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'https://github.com/samtools/%(namelower)s/releases/download/%(version)s/']
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sources = [SOURCELOWER_TAR_BZ2]
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dependencies = [
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('zlib', '1.2.11', '', True),
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('XZ', '5.2.4', '', True),
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('bzip2', '1.0.6', '', True),
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]
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sanity_check_paths = {
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'files': ["bin/bgzip", "bin/tabix", "lib/libhts.%s" % SHLIB_EXT],
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'dirs': [],
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}
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moduleclass = 'bio'
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