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45 lines
1.3 KiB
Plaintext
45 lines
1.3 KiB
Plaintext
easyblock = 'PerlModule'
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name = 'PSORTb'
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version = '3.0.4'
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versionsuffix = '-Perl-%(perlver)s'
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homepage = 'http://psort.org/psortb/index.html'
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description = """PSORTb v3.0.4 is the most precise bacterial localization prediction tool available."""
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toolchain = {'name': 'foss', 'version': '2016a'}
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source_urls = ['http://www.psort.org/download/']
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sources = ['bio-tools-psort-all.%(version)s.tar.gz']
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patches = [
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'PSORTb-%(version)s-libpsortb.patch',
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]
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dependencies = [
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('Perl', '5.22.1'),
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('libpsortb','1.0'),
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('BioPerl','1.6.924','-Perl-5.22.1'),
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('BLAST','2.2.26', '-Linux_x86_64', True),
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('pftoolsV3','20160324'),
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]
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options = {'modulename': 'Bio::Tools::PSort'}
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preconfigopts = "export PSORTROOT=%(installdir)s && "
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prebuildopts = 'sed -i "s/CC = cc/CC ?= gcc/" bio-tools-psort-modhmm/Makefile && '
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postinstallcmds = [
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"cp -r psort/* %(installdir)s/.",
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]
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sanity_check_paths = {
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'files': ['lib/perl5/site_perl/%(perlver)s/x86_64-linux-thread-multi/Algorithm/HMM.pm',
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'lib/perl5/site_perl/%(perlver)s/x86_64-linux-thread-multi/Bio/Tools/PSort.pm'],
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'dirs': ['lib/perl5/site_perl/%(perlver)s/x86_64-linux-thread-multi/Algorithm/HMM',
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'lib/perl5/site_perl/%(perlver)s/x86_64-linux-thread-multi/Bio/Tools/PSort'],
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}
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moduleclass = 'bio'
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