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39 lines
1.1 KiB
Plaintext
39 lines
1.1 KiB
Plaintext
# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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# Author: Pablo Escobar Lopez
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# Swiss Institute of Bioinformatics
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# Biozentrum - University of Basel
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# Modified by
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# Adam Huffman
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# The Francis Crick Institute
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easyblock = 'Tarball'
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name = 'MuTect'
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version = '1.1.7'
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versionsuffix = '-Java-%(javaver)s'
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homepage = 'http://www.broadinstitute.org/cancer/cga/mutect'
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description = """ MuTect is a method developed at the Broad Institute for the reliable
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and accurate identification of somatic point mutations in next generation sequencing
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data of cancer genomes. """
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toolchain = {'name': 'dummy', 'version': ''}
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# Need to be logged in to download, at this URL
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# and to click the checkbox to agree to the licence
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# https://www.broadinstitute.org/gatk/download/auth?package=MuTect
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sources = ['%(namelower)s-%(version)s.jar.zip']
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dependencies = [('Java', '1.7.0_80')]
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sanity_check_paths = {
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'files': ["%(namelower)s-%(version)s.jar"],
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'dirs': [],
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}
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modloadmsg = """
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To start MuTect: java -jar \\$EBROOTMUTECT/%(namelower)s-%(version)s.jar
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"""
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moduleclass = 'bio'
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