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38 lines
1.1 KiB
Plaintext
38 lines
1.1 KiB
Plaintext
# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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# Author: Pablo Escobar Lopez
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# Swiss Institute of Bioinformatics
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# Biozentrum - University of Basel
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easyblock = 'ConfigureMake'
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name = 'GMAP-GSNAP'
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version = "2015-12-31.v2"
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homepage = 'http://research-pub.gene.com/gmap/'
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description = """GMAP: A Genomic Mapping and Alignment Program for mRNA and EST Sequences
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GSNAP: Genomic Short-read Nucleotide Alignment Program"""
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toolchain = {'name': 'foss', 'version': '2015b'}
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source_urls = ['http://research-pub.gene.com/gmap/src/']
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sources = [SOURCELOWER_TAR_GZ]
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# with these deps you can use standard compressed files
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# to support files in gobby format take a look at README for extra dependencies
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# http://research-pub.gene.com/gmap/src/README
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dependencies = [
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('bzip2', '1.0.6'),
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('zlib', '1.2.8'),
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]
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# you can change the MAX_READLENGTH for GSNAP with something like this.
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# details in the README http://research-pub.gene.com/gmap/src/README
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#configopts = 'MAX_READLENGTH=250'
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sanity_check_paths = {
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'files': ['bin/gmap', 'bin/gsnap'],
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'dirs': [],
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}
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moduleclass = 'bio'
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