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34 lines
1.1 KiB
Plaintext
34 lines
1.1 KiB
Plaintext
##
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# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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#
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# Copyright:: Copyright 2012-2013 The Cyprus Institute
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# Authors:: Andreas Panteli <a.panteli@cyi.ac.cy>, Thekla Loizou <t.loizou@cyi.ac.cy>
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# License:: MIT/GPL
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#
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##
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name = 'BLAT'
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version = '3.5'
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homepage = 'http://genome.ucsc.edu/FAQ/FAQblat.html'
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description = "BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more."
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toolchain = {'name': 'ictce', 'version': '5.5.0'}
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sources = ['%%(namelower)sSrc%s.zip' % ''.join(version.split('.'))]
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source_urls = ['http://users.soe.ucsc.edu/~kent/src']
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dependencies = [('libpng', '1.6.6')]
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buildopts = 'CC="$CC" COPT= L="$LIBS"'
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files_to_copy = ["bin", "blat", "gfClient", "gfServer", "hg", "inc", "jkOwnLib", "lib", "utils", "webBlat"]
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sanity_check_paths = {
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'files': ["bin/%s" % x for x in ['blat', 'faToNib', 'faToTwoBit', 'gfClient', 'gfServer', 'nibFrag',
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'pslPretty', 'pslReps', 'pslSort', 'twoBitInfo', 'twoBitToFa']],
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'dirs': files_to_copy,
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}
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moduleclass = 'bio'
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