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37 lines
1.1 KiB
Plaintext
37 lines
1.1 KiB
Plaintext
# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
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# Author: Pablo Escobar Lopez
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# Swiss Institute of Bioinformatics
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# Biozentrum - University of Basel
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easyblock = 'MakeCp'
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name = "BEDOPS"
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version = "2.4.1"
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homepage = 'https://github.com/bedops/bedops'
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description = """ BEDOPS is an open-source command-line toolkit that performs highly
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efficient and scalable Boolean and other set operations, statistical calculations,
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archiving, conversion and other management of genomic data of arbitrary scale."""
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# this application requires GCC-4.8.x or higher
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# be aware if you switch to a different toolchain
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toolchain = {'name': 'GCC', 'version': '4.8.4'}
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source_urls = ['https://github.com/bedops/bedops/archive/']
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sources = ['v%(version)s.tar.gz']
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buildopts = ' static && make install'
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parallel = 1
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files_to_copy = ["bin"]
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sanity_check_paths = {
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'files': ["bin/%s" % x for x in ["bedmap", "bam2bed" , "sort-bed",
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"starchcat", "vcf2bed", "wig2bed",
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"gtf2bed", "bedops", "wig2bed"]],
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'dirs': []
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}
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moduleclass = 'bio'
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