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new file: d/Doxygen/Doxygen-1.11.0-GCCcore-14.2.0.eb new file: g/gompi/gompi-2024it4i.eb new file: g/gzip/gzip-1.13-GCCcore-14.2.0.eb new file: h/HDF5/HDF5-1.14.5-gompi-2024it4i.eb new file: l/libiconv/libiconv-1.17-GCCcore-14.2.0.eb new file: l/lz4/lz4-1.9.4-GCCcore-14.2.0.eb new file: m/make/make-4.4.1-GCCcore-14.2.0.eb new file: n/netCDF-Fortran/netCDF-Fortran-4.6.1-gompi-2024it4i.eb new file: n/netCDF/netCDF-4.9.2-gompi-2024it4i.eb new file: o/OpenBLAS/OpenBLAS-0.3.27-GCC-14.2.0.eb new file: p/PRRTE/PRRTE-3.0.5-GCCcore-14.2.0.eb new file: s/Szip/Szip-2.1.1-GCCcore-14.2.0.eb new file: z/zstd/zstd-1.5.6-GCCcore-14.2.0.eb
71 lines
2.6 KiB
Plaintext
71 lines
2.6 KiB
Plaintext
# IT4Innovations
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# LK 2024
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# rucne kompilovat, pak jen --module-only
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# po cmake pridat -lmpi do netcdf.pc nc-config libnetcdf.settings
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name = 'netCDF'
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version = '4.9.2'
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homepage = 'https://www.unidata.ucar.edu/software/netcdf/'
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description = """NetCDF (network Common Data Form) is a set of software libraries
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and machine-independent data formats that support the creation, access, and sharing of array-oriented
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scientific data."""
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toolchain = {'name': 'gompi', 'version': '2024it4i'}
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import os
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if os.environ.get("CLUSTERNAME") in ["KAROLINA"]:
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toolchainopts = {'usempi': True, 'opt': True, 'optarch': 'march=core-avx2'}
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else:
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toolchainopts = {'usempi': True, 'opt': True}
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source_urls = ['https://github.com/Unidata/netcdf-c/archive/']
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sources = ['v%(version)s.tar.gz']
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patches = [
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'netCDF-4.9.0_skip-nasa-test.patch',
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]
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checksums = [
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{'v4.9.2.tar.gz': 'bc104d101278c68b303359b3dc4192f81592ae8640f1aee486921138f7f88cb7'},
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'19d99e03c048b037dc01f03f5b8ddc910ebaceb076d0f050540d348f26dfcd2a', # netCDF-4.9.0_skip-nasa-test.patch
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]
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builddependencies = [
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('Autotools', '20231222'),
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('CMake', '3.30.5'),
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('Doxygen', '1.11.0'),
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]
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dependencies = [
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('HDF5', '1.14.5'),
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('cURL', '8.7.1'),
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('Szip', '2.1.1'),
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('zstd', '1.5.6'),
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('bzip2', '1.0.8'),
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('libxml2', '2.12.7'),
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]
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# disable Szip, zlib parallel I/O tests, since these can hang on some systems, e.g. generoso
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# see: https://github.com/easybuilders/easybuild-easyconfigs/pull/16834
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# and https://github.com/easybuilders/easybuild-easyconfigs/pull/17107#issuecomment-1432947172
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# and https://github.com/easybuilders/easybuild-easyconfigs/pull/18523#issuecomment-1675313158
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preconfigopts = ("sed -i -e 's|@MPIEXEC@ -n 16 ./tst_parallel3|echo \"skipped by EasyBuild\"|g'"
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" -e 's|@MPIEXEC@ -n 4 ./tst_parallel5|echo \"skipped by EasyBuild\"|g'"
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" -e 's|@MPIEXEC@ -n 4 ./tst_parallel_zlib|echo \"skipped by EasyBuild\"|g'"
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" -e 's|@MPIEXEC@ -n 4 ./tst_parallel_compress|echo \"skipped by EasyBuild\"|g'"
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" %(builddir)s/%(namelower)s-c-%(version)s/nc_test4/run_par_test.sh.in &&")
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# make sure both static and shared libs are built
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# and disable "remote" tests that access a unreliable external test server over internet
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configopts = [
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"-DENABLE_DAP_REMOTE_TESTS=OFF -DBUILD_SHARED_LIBS=OFF",
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"-DENABLE_DAP_REMOTE_TESTS=OFF -DBUILD_SHARED_LIBS=ON",
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]
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buildopts = 'CFLAGS="-O3 -fPIC"'
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# some tests try to start 16 MPI ranks, so we need to allow oversubscription to avoid failing tests
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pretestopts = "OMPI_MCA_rmaps_base_oversubscribe=1 "
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runtest = 'test'
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moduleclass = 'data'
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