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31 lines
1.0 KiB
Plaintext
31 lines
1.0 KiB
Plaintext
# IT4Innovations 2019
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easyblock = 'PackedBinary'
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name = 'FastQC'
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version = '0.11.8'
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homepage = 'http://www.bioinformatics.babraham.ac.uk/projects/fastqc/'
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description = """FastQC is a quality control application for high throughput sequence data.
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It reads in sequence data in a variety of formats and can either provide an interactive
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application to review the results of several different QC checks, or create an HTML based
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report which can be integrated into a pipeline."""
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toolchain = SYSTEM
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source_urls = ['http://www.bioinformatics.babraham.ac.uk/projects/%(namelower)s/']
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sources = ['%(namelower)s_v%(version)s.zip']
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dependencies = [('Java', '1.8.0_202')]
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install_cmd = "cp -a FastQC/* %(installdir)s && chmod +x %(installdir)s/fastqc"
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sanity_check_paths = {
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'files': ["fastqc", "fastqc_icon.ico", "INSTALL.txt", "jbzip2-0.9.jar", "LICENSE.txt",
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"README.txt", "RELEASE_NOTES.txt", "run_fastqc.bat", "sam-1.103.jar"],
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'dirs': ["Configuration", "Help", "Templates", "uk"],
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}
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# How to create working alias?
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moduleclass = 'bio'
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