##
# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
#
# Copyright:: Copyright 2012-2013 The Cyprus Institute
# Authors::   Andreas Panteli <a.panteli@cyi.ac.cy>, Thekla Loizou <t.loizou@cyi.ac.cy>, George Tsouloupas <g.tsouloupas@cyi.ac.cy>
# License::   MIT/GPL
#
##
easyblock = 'MakeCp'

name = "FASTA"
version = "36.3.5e"

homepage = 'http://fasta.bioch.virginia.edu'
description = """The FASTA programs find regions of local or global (new) similarity between
protein or DNA sequences, either by searching Protein or DNA databases, or by identifying
local duplications within a sequence."""

toolchain = {'name': 'goolf', 'version': '1.4.10'}

source_urls = ['http://faculty.virginia.edu/wrpearson/fasta/fasta36']
sources = [SOURCELOWER_TAR_GZ]

buildopts = '-C ./src -f ../make/Makefile.linux_sse2 all'

files_to_copy = [
    "bin",
    "conf",
    "data",
    "doc",
    "FASTA_LIST",
    "misc",
    "README",
    "seq",
    "sql",
    "test"]

sanity_check_paths = {'files': ["FASTA_LIST",
                                "README"] + ['bin/%s' % x for x in ['lav2svg',
                                                                    'lav2ps',
                                                                    'map_db']] + ['bin/%s%%(version_major)s' % x for x in ['fasta',
                                                                                                                           'fastm',
                                                                                                                           'fastx',
                                                                                                                           'ggsearch',
                                                                                                                           'lalign',
                                                                                                                           'tfastf',
                                                                                                                           'tfasts',
                                                                                                                           'tfasty',
                                                                                                                           'fastf',
                                                                                                                           'fasts',
                                                                                                                           'fasty',
                                                                                                                           'glsearch',
                                                                                                                           'ssearch',
                                                                                                                           'tfastm',
                                                                                                                           'tfastx']],
                      'dirs': ["conf",
                               "data",
                               "doc",
                               "misc",
                               "seq",
                               "sql",
                               "test"]}

moduleclass = 'bio'