# IT4Innovations 2019

easyblock = "Tarball"

name = 'Qualimap'
version = '2.2.1'

homepage = 'http://qualimap.bioinfo.cipf.es/'
description = """Qualimap 2 is a platform-independent application written in
 Java and R that provides both a Graphical User Inteface (GUI) and a command-line
 interface to facilitate the quality control of alignment sequencing data and its
 derivatives like feature counts."""

toolchain = {'name': 'intel', 'version': '2017a'}

sources = ['qualimap_v%(version)s.zip']
source_urls = ['https://bitbucket.org/kokonech/qualimap/downloads']

dependencies = [
    ('R', '3.5.3'),
]

modextrapaths = {"PATH": '.'}

sanity_check_paths = {
    'files': ['qualimap'],
    'dirs': ['lib', 'scripts', 'species'],
}

moduleclass = 'bio'