# IT4Innovations 2019

easyblock = "CmdCp"

name = 'Qualimap'
version = '2.2.1'

homepage = 'http://qualimap.bioinfo.cipf.es/'
description = """Qualimap 2 is a platform-independent application written in
 Java and R that provides both a Graphical User Inteface (GUI) and a command-line
 interface to facilitate the quality control of alignment sequencing data and its
 derivatives like feature counts."""

toolchain = {'name': 'dummy', 'version': ''}

sources = ['qualimap_v2.2.1.zip']
source_urls = ['https://bitbucket.org/kokonech/qualimap/downloads']

dependencies = [
    ('Java', '1.8.0_121'),
]

cmds_map = [('.*', "./compile.sh")]

files_to_copy = [(['output/bazel'], 'bin')]

sanity_check_paths = {
    'files': ['bin/bazel'],
    'dirs': [],
}

moduleclass = 'bio'