mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
synced 2025-04-07 23:42:12 +01:00
modified: d/DynaPhoPy/DynaPhoPy-1.16.3-Py-3.6.eb
new file: f/FFTW/FFTW-3.3.7-GCC-6.3.0-2.27.eb new file: o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-uv.eb new file: o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27-uv.eb new file: o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27-uv.eb new file: p/pyFFTW/pyFFTW-0.10.4-Py-3.6.eb
This commit is contained in:
Lukáš Krupčík
parent
92b02a6f0f
commit
e0c3011617
@ -18,6 +18,7 @@ dependencies = [
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('scipy', '1.0.0'),
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('h5py', '2.7.1'),
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('PyYAML', '3.12'),
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('pyFFTW', '0.10.4'),
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]
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sanity_check_paths = {
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36
f/FFTW/FFTW-3.3.7-GCC-6.3.0-2.27.eb
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36
f/FFTW/FFTW-3.3.7-GCC-6.3.0-2.27.eb
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@ -0,0 +1,36 @@
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# IT4Innovations 2018
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easyblock = 'ConfigureMake'
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name = 'FFTW'
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version = '3.3.7'
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homepage = 'http://www.fftw.org'
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description = """FFTW is a C subroutine library for computing the discrete Fourier transform (DFT)
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in one or more dimensions, of arbitrary input size, and of both real and complex data."""
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toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'}
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toolchainopts = {'optarch': True, 'pic': True}
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source_urls = [homepage]
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sources = ['fftw-%(version)s.tar.gz']
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common_configopts = "--enable-threads --enable-openmp --with-pic"
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configopts = [
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common_configopts + " --enable-single --enable-sse2 ",
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common_configopts + " --enable-quad-precision",
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common_configopts + " --enable-long-double ",
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common_configopts + " --enable-sse2 ", # default as last
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]
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sanity_check_paths = {
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'files': ['bin/fftw%s' % x for x in ['-wisdom', '-wisdom-to-conf', 'f-wisdom', 'l-wisdom', 'q-wisdom']] +
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['include/fftw3%s' % x for x in ['.f', '.f03', '.h', 'l.f03', 'q.f03']] +
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['lib/libfftw3%s%s.a' % (x, y) for x in ['', 'f', 'l'] for y in ['', '_omp', '_threads']] +
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['lib/libfftw3q.a', 'lib/libfftw3q_omp.a'],
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'dirs': ['lib/pkgconfig'],
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}
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moduleclass = 'numlib'
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46
o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-uv.eb
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46
o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-uv.eb
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@ -0,0 +1,46 @@
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# UV1 Only
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easyblock = 'ConfigureMake'
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name = 'OpenMPI'
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version = '1.10.7'
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homepage = 'http://www.open-mpi.org/'
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description = """The Open MPI Project is an open source MPI-2 implementation."""
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toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'}
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sources = [SOURCELOWER_TAR_GZ]
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source_urls = ['http://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
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dependencies = [('hwloc', '1.11.7')]
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builddependencies = [
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('Java', '1.8.0_121', '', True)
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]
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configopts = '--with-threads=posix --enable-shared --enable-mpi-thread-multiple '
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configopts += '--enable-mpirun-prefix-by-default ' # suppress failure modes in relation to mpirun path
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configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
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configopts += '--disable-dlopen ' # statically link component, don't do dynamic loading
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configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
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configopts += '--enable-mpi-java ' # Java support RT#4090
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# for PBS Pro 13
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preconfigopts = 'export LIBS="-ldl" && '
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# needed for --with-verbs
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#osdependencies = [('libibverbs-dev', 'libibverbs-devel')]
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libs = ["mpi_cxx", "mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte", "vt", "vt-hyb", "vt-mpi", "vt-mpi-unify"]
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sanity_check_paths = {
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'files': ["bin/%s" % binfile for binfile in ["ompi_info", "opal_wrapper", "orterun"]] +
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["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in libs] +
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["include/%s.h" % x for x in ["mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]],
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'dirs': ["include/openmpi/ompi/mpi/cxx"],
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}
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modextravars = {'OMPI_MCA_btl_tcp_if_include': 'lo',
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# 'OMPI_MCA_oob_tcp_if_include': '10.0.0.0/8',
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}
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moduleclass = 'mpi'
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50
o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27-uv.eb
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50
o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27-uv.eb
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@ -0,0 +1,50 @@
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# Only for UV1 !!!
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easyblock = 'ConfigureMake'
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name = 'OpenMPI'
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version = '2.1.1'
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homepage = 'http://www.open-mpi.org/'
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description = """The Open MPI Project is an open source MPI-3.1 implementation."""
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toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'}
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source_urls = ['http://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
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sources = [SOURCELOWER_TAR_GZ]
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builddependencies = [
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('Java', '1.8.0_121', '', True)
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]
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dependencies = [
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('hwloc', '1.11.7')
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]
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# for PBS Pro 13
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preconfigopts = 'export LIBS="-ldl" && '
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configopts = '--enable-shared --enable-mpi-thread-multiple '
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configopts += '--enable-mpirun-prefix-by-default ' # suppress failure modes in relation to mpirun path
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configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
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#configopts += '--disable-dlopen ' # dont disable dlopen! https://github.com/open-mpi/ompi/issues/3630
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configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
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configopts += '--enable-mpi-java ' # Java support RT#4090
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configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings
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# needed for --with-verbs
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# osdependencies = [('libibverbs-dev', 'libibverbs-devel')]
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libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"]
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sanity_check_paths = {
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'files': ["bin/%s" % binfile for binfile in ["ompi_info", "opal_wrapper", "orterun"]] +
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["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in libs] +
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["include/%s.h" % x for x in ["mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]],
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'dirs': [],
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}
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modextravars = {'OMPI_MCA_btl_tcp_if_include': 'lo',
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# 'OMPI_MCA_btl_tcp_if_exclude': 'bond0,bond1,bond2,ib0,ib1',
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}
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moduleclass = 'mpi'
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54
o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27-uv.eb
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54
o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27-uv.eb
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@ -0,0 +1,54 @@
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# UV1 only
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easyblock = 'ConfigureMake'
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name = 'OpenMPI'
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version = '3.0.0'
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homepage = 'http://www.open-mpi.org/'
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description = """The Open MPI Project is an open source MPI-2 implementation."""
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toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'}
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source_urls = ['http://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
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sources = [SOURCELOWER_TAR_GZ]
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checksums = ['0bbb279b88edc25bbded39520dab6d4b32020277a6088fb1456c9437a8231cf8']
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builddependencies = [
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('Java', '1.8.0_121', '', True)
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]
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dependencies = [
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('hwloc', '1.11.7'),
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('zlib', '1.2.11', '', True),
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]
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configopts = '--enable-shared --enable-mpi-thread-multiple '
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configopts += '--enable-mpirun-prefix-by-default ' # suppress failure modes in relation to mpirun path
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configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
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#configopts += '--disable-dlopen ' # dont disable dlopen! https://github.com/open-mpi/ompi/issues/3630
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configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
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configopts += '--enable-mpi-java ' # Java support RT#4090
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configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings
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# for PBS Pro 13
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preconfigopts = 'export LIBS="-ldl" && '
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# to enable SLURM integration (site-specific)
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# configopts += '--with-slurm --with-pmi=/usr/include/slurm --with-pmi-libdir=/usr'
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# needed for --with-verbs
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#osdependencies = [('libibverbs-dev', 'libibverbs-devel')]
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libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"]
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sanity_check_paths = {
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'files': ["bin/%s" % binfile for binfile in ["ompi_info", "opal_wrapper", "orterun"]] +
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["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in libs] +
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["include/%s.h" % x for x in ["mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]],
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'dirs': [],
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}
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modextravars = {'OMPI_MCA_btl_tcp_if_include': 'lo',
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# 'OMPI_MCA_oob_tcp_if_include': '10.0.0.0/8',
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}
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moduleclass = 'mpi'
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25
p/pyFFTW/pyFFTW-0.10.4-Py-3.6.eb
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25
p/pyFFTW/pyFFTW-0.10.4-Py-3.6.eb
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@ -0,0 +1,25 @@
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# IT4Innovations 2018
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easyblock = "PythonPackage"
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name = 'pyFFTW'
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version = '0.10.4'
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homepage = 'https://pypi.python.org/pypi/pyFFTW'
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description = 'A pythonic wrapper around FFTW, the FFT library, presenting a unified interface for all the supported transforms.'
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toolchain = {'name': 'Py', 'version': '3.6'}
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source_urls = [PYPI_SOURCE]
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sources = [SOURCE_TAR_GZ]
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dependencies = [
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('FFTW', '3.3.7', '', ('GCC', '6.3.0-2.27')),
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('numpy', '1.13.3'),
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]
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sanity_check_paths = {
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'files': [],
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'dirs': ['lib/python3.6/site-packages/%(name)s-%(version)s-py3.6-linux-x86_64.egg'],
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}
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moduleclass = 'python'
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