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new file: c/CGAL/CGAL-4.14.1-foss-2020a-Python-3.7.8.eb

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new file:   l/LLVM/LLVM-6.0.0-GCCcore-9.3.0.eb
	new file:   l/LLVM/LLVM-8.0.1-GCCcore-9.3.0.eb
	new file:   m/Mako/Mako-1.0.6-GCCcore-9.3.0-Python-2.7.18.eb
	new file:   m/Mesa/Mesa-18.1.1-foss-2020a.eb
	new file:   m/Mesa/Mesa-18.3.6-GCCcore-9.3.0.eb
	modified:   o/OpenFOAM/OpenFOAM-7-foss-2020a.eb
	modified:   p/ParaView/ParaView-5.6.2-foss-2020a-Python-3.7.8-mpi.eb
	modified:   r/R/R-4.0.0-foss-2020a.eb
This commit is contained in:
Josef Hrabal 2020-08-06 09:52:46 +02:00
parent 2b39373d1e
commit d9bcd66c7d
9 changed files with 303 additions and 3 deletions
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40
c/CGAL/CGAL-4.14.1-foss-2020a-Python-3.7.8.eb Normal file
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# JH 2020
name = 'CGAL'
version = '4.14.1'
versionsuffix = '-Python-%(pyver)s'
homepage = 'https://www.cgal.org/'
description = """The goal of the CGAL Open Source Project is to provide easy access to efficient
and reliable geometric algorithms in the form of a C++ library."""
toolchain = {'name': 'foss', 'version': '2020a'}
toolchainopts = {'strict': True}
source_urls = ['https://github.com/CGAL/cgal/releases/download/releases%2FCGAL-%(version)s']
sources = [SOURCE_TAR_XZ]
checksums = ['d4ec2528b88a7c3a07b0b86db96c216822f85b951bf4bc7f9d1f26bf6c369afe']
builddependencies = [
('CMake', '3.16.4'),
('Eigen', '3.3.7'),
]
dependencies = [
('zlib', '1.2.11'),
('Python', '3.7.8'),
('Boost', '1.72.0'),
('MPFR', '4.0.2'),
('GMP', '6.2.0'),
('Mesa', '18.1.1'),
('libGLU', '9.0.1'),
('Qt5', '5.14.1'),
]
configopts = "-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include "
configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT
configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT
configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON "
configopts += "-DWITH_GMPXX=ON -DWITH_LAPACK=ON -DWITH_BLAS=ON "
moduleclass = 'numlib'

40
l/LLVM/LLVM-6.0.0-GCCcore-9.3.0.eb Normal file
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# JH 2020
name = 'LLVM'
version = '6.0.0'
homepage = "https://llvm.org/"
description = """The LLVM Core libraries provide a modern source- and target-independent
optimizer, along with code generation support for many popular CPUs
(as well as some less common ones!) These libraries are built around a well
specified code representation known as the LLVM intermediate representation
("LLVM IR"). The LLVM Core libraries are well documented, and it is
particularly easy to invent your own language (or port an existing compiler)
to use LLVM as an optimizer and code generator."""
toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
toolchainopts = {'cstd': 'gnu++11'}
source_urls = ["https://llvm.org/releases/%(version)s"]
sources = ["llvm-%(version)s.src.tar.xz"]
checksums = ['1ff53c915b4e761ef400b803f07261ade637b0c269d99569f18040f3dcee4408']
builddependencies = [
('binutils', '2.34'),
('CMake', '3.16.4'),
('Python', '2.7.18'),
]
dependencies = [
('ncurses', '6.2'),
('zlib', '1.2.11'),
]
build_shared_libs = True
sanity_check_paths = {
'files': ['bin/llvm-ar', 'bin/FileCheck'],
'dirs': ['include/llvm', 'include/llvm-c'],
}
moduleclass = 'compiler'

40
l/LLVM/LLVM-8.0.1-GCCcore-9.3.0.eb Normal file
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# JH 2020
name = 'LLVM'
version = '8.0.1'
homepage = "https://llvm.org/"
description = """The LLVM Core libraries provide a modern source- and target-independent
optimizer, along with code generation support for many popular CPUs
(as well as some less common ones!) These libraries are built around a well
specified code representation known as the LLVM intermediate representation
("LLVM IR"). The LLVM Core libraries are well documented, and it is
particularly easy to invent your own language (or port an existing compiler)
to use LLVM as an optimizer and code generator."""
toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
toolchainopts = {'cstd': 'gnu++11'}
source_urls = ['https://github.com/llvm/llvm-project/releases/download/llvmorg-%(version)s']
sources = ['llvm-%(version)s.src.tar.xz']
checksums = ['44787a6d02f7140f145e2250d56c9f849334e11f9ae379827510ed72f12b75e7']
builddependencies = [
('binutils', '2.34'),
('CMake', '3.16.4'),
('Python', '3.7.8'),
]
dependencies = [
('ncurses', '6.2'),
('zlib', '1.2.11'),
]
build_shared_libs = True
sanity_check_paths = {
'files': ['bin/llvm-ar', 'bin/FileCheck'],
'dirs': ['include/llvm', 'include/llvm-c'],
}
moduleclass = 'compiler'

24
m/Mako/Mako-1.0.6-GCCcore-9.3.0-Python-2.7.18.eb Normal file
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# JH 2020
easyblock = 'PythonPackage'
name = 'Mako'
version = '1.0.6'
versionsuffix = '-Python-%(pyver)s'
homepage = 'http://www.makotemplates.org'
description = """A super-fast templating language that borrows the best ideas from the existing templating languages"""
toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
source_urls = [PYPI_SOURCE]
sources = [SOURCE_TAR_GZ]
dependencies = [('Python', '2.7.18')]
sanity_check_paths = {
'files': ['bin/mako-render'],
'dirs': ['lib/python%(pyshortver)s/site-packages/%(name)s-%(version)s-py%(pyshortver)s.egg'],
}
moduleclass = 'devel'

81
m/Mesa/Mesa-18.1.1-foss-2020a.eb Normal file
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# JH 2020
# Automatically converted from Mesa-17.2.4-intel-2017b.eb
# Original message:
# the purpose of the easyconfig is to build a Mesa for software rendering,
# not hardware rendering. This means you want at least SSE4.2. We build:
# - llvmpipe: the high-performance Gallium LLVM driver
# - swr: Intel's OpenSWR
# it will try to use the llvmpipe by default. It you want swr, do:
# GALLIUM_DRIVER=swr
easyblock = 'ConfigureMake'
name = 'Mesa'
version = '18.1.1'
homepage = 'https://www.mesa3d.org/'
description = """Mesa is an open-source implementation of the OpenGL specification -
a system for rendering interactive 3D graphics."""
toolchain = {'name': 'foss', 'version': '2020a'}
# swr detects and builds parts specific for AVX and AVX2. If we use
# -xHost, this always gets overwritten and will fail.
toolchainopts = {'optarch': False}
source_urls = [
'https://mesa.freedesktop.org/archive/',
'https://mesa.freedesktop.org/archive/%(version)s',
'ftp://ftp.freedesktop.org/pub/mesa/%(version)s',
'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x/%(version)s',
'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x',
]
sources = [SOURCELOWER_TAR_XZ]
patches = [
'Mesa-17.3.6_fix-strip-llvm-flags.patch',
'Mesa-18.1.1-query-mit-shm.patch',
]
checksums = [
'd3312a2ede5aac14a47476b208b8e3a401367838330197c4588ab8ad420d7781', # mesa-18.1.1.tar.xz
'5aa4e92ed96e3d47ffbecd1ec3a1642407dff11995c5585eb5e06c396654ee30', # Mesa-17.3.6_fix-strip-llvm-flags.patch
'a9df2759758318d917debbfcc2cb15f6525b3dce41bd1e481d16e2eaa592a24e', # Mesa-18.1.1-query-mit-shm.patch
]
builddependencies = [
('flex', '2.6.4'),
('Bison', '3.5.3'),
('Autotools', '20180311'),
('pkg-config', '0.29.2'),
('Mako', '1.0.6', '-Python-2.7.18'),
('libxml2', '2.9.10'),
('expat', '2.2.9'),
]
dependencies = [
('zlib', '1.2.11'),
('nettle', '3.5.1'),
('libdrm', '2.4.100'),
('LLVM', '6.0.0'),
('X11', '20200222'),
('libunwind', '1.3.1'),
]
# GLU is not part anymore of Mesa package!
configopts = " --disable-osmesa --enable-gallium-osmesa --enable-gallium-llvm --enable-glx --disable-dri"
configopts += " --disable-gbm --disable-driglx-direct --with-gallium-drivers='swrast,swr' --disable-egl"
configopts += " --with-osmesa-bits=32 --enable-texture-float --enable-llvm-shared-libs "
buildopts = 'V=1'
sanity_check_paths = {
'files': ['lib/libGL.%s' % SHLIB_EXT, 'lib/libOSMesa.%s' % SHLIB_EXT,
'lib/libGLESv1_CM.%s' % SHLIB_EXT, 'lib/libGLESv2.%s' % SHLIB_EXT,
'include/GL/glext.h', 'include/GL/gl_mangle.h',
'include/GL/glx.h', 'include/GL/osmesa.h',
'include/GL/gl.h', 'include/GL/glxext.h',
'include/GL/glx_mangle.h', 'include/GLES/gl.h',
'include/GLES2/gl2.h', 'include/GLES3/gl3.h'],
'dirs': []
}
moduleclass = 'vis'

74
m/Mesa/Mesa-18.3.6-GCCcore-9.3.0.eb Normal file
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# JH 2020
easyblock = 'ConfigureMake'
name = 'Mesa'
version = '18.3.6'
homepage = 'http://www.mesa3d.org/'
description = """Mesa is an open-source implementation of the OpenGL specification -
a system for rendering interactive 3D graphics."""
toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
# swr detects and builds parts specific for AVX and AVX2. If we use
# -xHost, this always gets overwritten and will fail.
toolchainopts = {'optarch': False}
sources = [SOURCELOWER_TAR_XZ]
source_urls = [
'https://mesa.freedesktop.org/archive/',
'https://mesa.freedesktop.org/archive/%(version)s',
'ftp://ftp.freedesktop.org/pub/mesa/%(version)s',
'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x/%(version)s',
]
#patches = ['Mesa-17.0.2_fix-strip-llvm-flags.patch']
builddependencies = [
('binutils', '2.34'),
('flex', '2.6.4'),
('Bison', '3.5.3'),
('Autotools', '20180311'),
('pkg-config', '0.29.2'),
('Mako', '1.1.2'),
('libxml2', '2.9.10'),
('expat', '2.2.9'),
]
dependencies = [
('zlib', '1.2.11'),
('nettle', '3.5.1'),
('libdrm', '2.4.100'),
('LLVM', '8.0.1'),
('X11', '20200222'),
]
# GLU is not part anymore of Mesa package!
configopts = " --disable-osmesa --enable-gallium-osmesa --enable-gallium-llvm --enable-glx --disable-dri"
configopts += " --disable-gbm --disable-driglx-direct --with-gallium-drivers='swrast,swr' --disable-egl"
configopts += " --with-osmesa-bits=32 --enable-texture-float --enable-llvm-shared-libs "
buildopts = 'V=1'
sanity_check_paths = {
'files': [
'lib/libGL.%s' %
SHLIB_EXT,
'lib/libOSMesa.%s' %
SHLIB_EXT,
'lib/libGLESv1_CM.%s' %
SHLIB_EXT,
'lib/libGLESv2.%s' %
SHLIB_EXT,
'include/GL/glext.h',
'include/GL/gl_mangle.h',
'include/GL/glx.h',
'include/GL/osmesa.h',
'include/GL/gl.h',
'include/GL/glxext.h',
'include/GL/glx_mangle.h',
'include/GLES/gl.h',
'include/GLES2/gl2.h',
'include/GLES3/gl3.h'],
'dirs': []}
moduleclass = 'vis'

4
o/OpenFOAM/OpenFOAM-7-foss-2020a.eb
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@ -35,8 +35,8 @@ dependencies = [
# OpenFOAM requires 64 bit METIS using 32 bit indexes (array indexes)
('METIS', '5.1.0'),
('SCOTCH', '6.0.9'),
('CGAL', '4.14.3', '-Python-3.8.2'),
('ParaView', '5.8.0', '-Python-3.8.2-mpi'),
('CGAL', '4.14.1', '-Python-3.7.8'),
('ParaView', '5.6.2', '-Python-3.7.8-mpi'),
]
builddependencies = [

2
p/ParaView/ParaView-5.6.2-foss-2020a-Python-3.7.8-mpi.eb
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@ -25,7 +25,7 @@ dependencies = [
('netCDF', '4.7.4'),
('libGLU', '9.0.1'),
('X11', '20200222'),
('Mesa', '20.0.2'),
('Mesa', '18.1.1'), # Needen for libGL.so
('Qt5', '5.14.1'),
('zlib', '1.2.11'),
('FFmpeg', '4.2.2'),

1
r/R/R-4.0.0-foss-2020a.eb
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@ -68,6 +68,7 @@ exts_default_options = {
'https://cran.r-project.org/src/contrib/', # current version of packages
'https://cran.freestatistics.org/src/contrib', # mirror alternative for current packages
'https://bioconductor.org/packages/release/bioc/src/contrib',
'http://bioconductor.org/packages/3.11/bioc/src/contrib/Archive/%(name)s',
],
'source_tmpl': '%(name)s_%(version)s.tar.gz',
}