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new file: m/mkl/mkl-2020.0.166.eb
new file: p/ParMETIS/ParMETIS-4.0.3-gompi-2019b.eb modified: p/PyQt5/PyQt5-5.13.1-Py-3.7.eb modified: q/Qt5/Qt5-5.13.1.eb new file: s/SuperLU_DIST/SuperLU_DIST-6.3.0-gompi-2019b.eb
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m/mkl/mkl-2020.0.166.eb
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m/mkl/mkl-2020.0.166.eb
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# IT4Innovations 2020
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name = 'mkl'
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version = '2020.0.166'
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homepage = 'http://software.intel.com/en-us/intel-mkl/'
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description = """Intel Math Kernel Library is a library of highly optimized,
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extensively threaded math routines for science, engineering, and financial
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applications that require maximum performance. Core math functions include
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BLAS, LAPACK, ScaLAPACK, Sparse Solvers, Fast Fourier Transforms, Vector Math, and more."""
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toolchain = SYSTEM
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sources = ['l_mkl_%(version)s.tgz']
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dontcreateinstalldir = 'True'
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interfaces = False
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postinstallcmds = [
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# extract the examples
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'tar xvzf %(installdir)s/mkl/examples/examples_cluster_c.tgz -C %(installdir)s/mkl/examples/',
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'tar xvzf %(installdir)s/mkl/examples/examples_cluster_f.tgz -C %(installdir)s/mkl/examples/',
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'tar xvzf %(installdir)s/mkl/examples/examples_core_c.tgz -C %(installdir)s/mkl/examples/',
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'tar xvzf %(installdir)s/mkl/examples/examples_core_f.tgz -C %(installdir)s/mkl/examples/',
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'tar xvzf %(installdir)s/mkl/examples/examples_f95.tgz -C %(installdir)s/mkl/examples/',
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]
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modextravars = {
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'MKL_EXAMPLES': '%(installdir)s/mkl/examples/',
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}
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moduleclass = 'numlib'
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24
p/ParMETIS/ParMETIS-4.0.3-gompi-2019b.eb
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p/ParMETIS/ParMETIS-4.0.3-gompi-2019b.eb
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# IT4Innovations 2020
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name = 'ParMETIS'
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version = '4.0.3'
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homepage = 'http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview'
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description = """ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs,
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meshes, and for local_computing fill-reducing orderings of sparse matrices. ParMETIS extends the functionality provided by METIS and includes
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routines that are especially suited for parallel AMR local_computations and large scale numerical simulations. The algorithms implemented in
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ParMETIS are based on the parallel multilevel k-way graph-partitioning, adaptive repartitioning, and parallel multi-constrained partitioning
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schemes."""
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toolchain = {'name': 'gompi', 'version': '2019b'}
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toolchainopts = {'usempi': True, 'pic': True}
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source_urls = [
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'http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis',
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'http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/OLD',
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]
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sources = [SOURCELOWER_TAR_GZ]
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builddependencies = [('CMake', '3.16.2', '', True)]
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moduleclass = 'math'
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# It4Innovations 2020
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# JH 2020
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easyblock = 'Bundle'
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@ -14,12 +14,11 @@ toolchainopts = {'cstd': 'c++11'}
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dependencies = [
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('Qt5', '5.13.1', '', True),
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('Python', '3.7.5', '-base', ('GCC', '8.3.0-2.32')),
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]
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default_easyblock = 'ConfigureMakePythonPackage'
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local_pylibdir = '%(installdir)s/lib/python%(pyshortver)s/site-packages'
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local_pylibdir = '%(installdir)s/lib/python3.7/site-packages'
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local_sip_configopts = " ".join([
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"configure.py",
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@ -59,7 +58,7 @@ local_pyqtweb_configopts = " ".join([
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])
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local_setup_env = "export PATH=%(installdir)s/bin:$PATH && "
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local_setup_env += "export PYTHONPATH=%(installdir)s/lib/python%(pyshortver)s/site-packages:$PYTHONPATH && "
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local_setup_env += "export PYTHONPATH=%(installdir)s/lib/python3.7/site-packages:$PYTHONPATH && "
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local_sipver = '4.19.19'
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components = [
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('SIP', local_sipver, {
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@ -92,7 +91,7 @@ components = [
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]
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sanity_check_paths = {
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'files': ['bin/sip', 'include/sip.h'] + ['lib/python%%(pyshortver)s/site-packages/%s' % x for x in (
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'files': ['bin/sip', 'include/sip.h'] + ['lib/python3.7/site-packages/%s' % x for x in (
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'sipconfig.py',
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'sipdistutils.py',
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'%%(name)s/sip.%s' % SHLIB_EXT,
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@ -103,9 +102,11 @@ sanity_check_paths = {
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}
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modextrapaths = {
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'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
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'PYTHONPATH': 'lib/python3.7/site-packages',
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'QT_INSTALL_DATA': 'qsci',
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'QT_PLUGIN_PATH': 'plugins',
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}
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skipsteps = ['sanitycheck']
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moduleclass = 'vis'
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check_qtwebengine = True
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maxparallel = 1
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maxparallel = 8
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builddependencies = [
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('pkg-config', '0.29.2'),
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('Bison', '3.3.2'),
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('flex', '2.6.4'),
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('Python', '2.7.15', '-base'),
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('Py', '3.7'),
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('Ninja', '1.9.0'),
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('gperf', '3.1'),
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]
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36
s/SuperLU_DIST/SuperLU_DIST-6.3.0-gompi-2019b.eb
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s/SuperLU_DIST/SuperLU_DIST-6.3.0-gompi-2019b.eb
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# IT4Innovations 2020
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easyblock = "CMakeMake"
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name = 'SuperLU_DIST'
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version = '6.3.0'
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homepage = 'https://github.com/xiaoyeli/superlu_dist'
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description = """SuperLU_DIST contains a set of subroutines to solve a sparse linear system A*X=B. It uses Gaussian elimination with static pivoting (GESP). Static pivoting is a technique that combines the numerical stability of partial pivoting with the scalability of Cholesky (no pivoting), to run accurately and efficiently on large numbers of processors.
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SuperLU_DIST is a parallel extension to the serial SuperLU library. It is targeted for the distributed memory parallel machines. SuperLU_DIST is implemented in ANSI C, and MPI for communications. Currently, the LU factorization and triangular solution routines, which are the most time-consuming part of the solution process, are parallelized. The other routines, such as static pivoting and column preordering for sparsity are performed sequentially. This "alpha" release contains double-precision real and double-precision complex data types."""
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toolchain = {'name': 'gompi', 'version': '2019b'}
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source_urls = ['https://github.com/xiaoyeli/superlu_dist/archive/']
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sources = ['v%(version)s.tar.gz']
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# CMake > 3 required. CMake >= 3.4 recommended
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builddependencies = [('CMake', '3.16.2', '', True)]
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dependencies = [
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('ParMETIS', '4.0.3'),
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('mkl', '2020.0.166', '', True),
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]
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separate_build_dir = True
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configopts = '-DTPL_PARMETIS_INCLUDE_DIRS="${EBROOTPARMETIS}/include" -DTPL_PARMETIS_LIBRARIES="${EBROOTPARMETIS}/lib/libparmetis.a" '
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configopts += '-DTPL_BLAS_LIBRARIES="$EBROOTMKL/compilers_and_libraries_2020.0.166/linux/mkl/lib/intel64/libmkl_intel_lp64.so;$EBROOTMKL/compilers_and_libraries_2020.0.166/linux/mkl/lib/intel64/libmkl_core.so;$EBROOTMKL/compilers_and_libraries_2020.0.166/linux/mkl/lib/intel64/libmkl_gnu_thread.so;"'
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sanity_check_paths = {
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'files': ['lib64/libsuperlu_dist.so'],
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'dirs': ['include', 'lib64'],
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}
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moduleclass = 'lib'
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