diff --git a/ARCHIVE/a/ALAMODE/ALAMODE-0.9.8-intel-2017a.eb b/ARCHIVE/a/ALAMODE/ALAMODE-0.9.8-intel-2017a.eb index 7d681b22..a0971e3d 100644 --- a/ARCHIVE/a/ALAMODE/ALAMODE-0.9.8-intel-2017a.eb +++ b/ARCHIVE/a/ALAMODE/ALAMODE-0.9.8-intel-2017a.eb @@ -22,11 +22,11 @@ dependencies = [ ('numpy', '1.13.0-Python-2.7.13-base', '', True), ] -commands = "cd alm && mv Makefile.linux Makefile && make && cd .. && " -commands += "cd anphon && mv Makefile.linux Makefile && make && cd .. && " -commands += "cd tools && make " +local_commands = "cd alm && mv Makefile.linux Makefile && make && cd .. && " +local_commands += "cd anphon && mv Makefile.linux Makefile && make && cd .. && " +local_commands += "cd tools && make " -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['alm/alm', 'anphon/anphon'], 'bin'), diff --git a/ARCHIVE/a/ATK/ATK-2.18.0.eb b/ARCHIVE/a/ATK/ATK-2.18.0.eb index 73c152ae..52354372 100644 --- a/ARCHIVE/a/ATK/ATK-2.18.0.eb +++ b/ARCHIVE/a/ATK/ATK-2.18.0.eb @@ -15,9 +15,9 @@ toolchain = SYSTEM source_urls = [FTPGNOME_SOURCE] sources = [SOURCELOWER_TAR_XZ] -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ - ('GLib', glibver), + ('GLib', local_glibver), ('GObject-Introspection', '1.47.1') ] diff --git a/ARCHIVE/a/ATLAS/ATLAS-3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1.eb b/ARCHIVE/a/ATLAS/ATLAS-3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1.eb index 1b713e7a..0e6e1f9b 100644 --- a/ARCHIVE/a/ATLAS/ATLAS-3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1.eb +++ b/ARCHIVE/a/ATLAS/ATLAS-3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1.eb @@ -10,8 +10,8 @@ description = """ATLAS (Automatically Tuned Linear Algebra Software) is the appl toolchain = {'name': 'GCC', 'version': '5.4.0-2.26'} toolchainopts = {'pic': True} -lapackver = '3.6.1' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.1' +versionsuffix = '-LAPACK-%s' % local_lapackver source_urls = [ ('http://sourceforge.net/projects/math-atlas/files/Stable/%(version)s', @@ -20,7 +20,7 @@ source_urls = [ ] sources = [ '%(namelower)s%(version)s.tar.bz2', - 'lapack-%s.tgz' % lapackver, + 'lapack-%s.tgz' % local_lapackver, ] # build full LAPACK library with supplied netlib LAPACK diff --git a/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-5.4.0-2.26-LAPACK-3.6.1.eb b/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-5.4.0-2.26-LAPACK-3.6.1.eb index df5d2d70..9d34ec45 100644 --- a/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-5.4.0-2.26-LAPACK-3.6.1.eb +++ b/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-5.4.0-2.26-LAPACK-3.6.1.eb @@ -10,8 +10,8 @@ description = """ATLAS (Automatically Tuned Linear Algebra Software) is the appl toolchain = {'name': 'GCC', 'version': '5.4.0-2.26'} toolchainopts = {'pic': True} -lapackver = '3.6.1' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.1' +versionsuffix = '-LAPACK-%s' % local_lapackver source_urls = [ ('http://sourceforge.net/projects/math-atlas/files/Stable/%(version)s', @@ -20,7 +20,7 @@ source_urls = [ ] sources = [ '%(namelower)s%(version)s.tar.bz2', - 'lapack-%s.tgz' % lapackver, + 'lapack-%s.tgz' % local_lapackver, ] # build full LAPACK library with supplied netlib LAPACK diff --git a/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-6.3.0-2.27-LAPACK-3.6.1.eb b/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-6.3.0-2.27-LAPACK-3.6.1.eb index a8fd5d54..71d10d6d 100644 --- a/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-6.3.0-2.27-LAPACK-3.6.1.eb +++ b/ARCHIVE/a/ATLAS/ATLAS-3.10.3-GCC-6.3.0-2.27-LAPACK-3.6.1.eb @@ -12,8 +12,8 @@ description = """ATLAS (Automatically Tuned Linear Algebra Software) is the appl toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'} toolchainopts = {'pic': True} -lapackver = '3.6.1' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.1' +versionsuffix = '-LAPACK-%s' % local_lapackver source_urls = [ ('http://sourceforge.net/projects/math-atlas/files/Stable/%(version)s', @@ -22,7 +22,7 @@ source_urls = [ ] sources = [ '%(namelower)s%(version)s.tar.bz2', - 'lapack-%s.tgz' % lapackver, + 'lapack-%s.tgz' % local_lapackver, ] preconfigopts = 'export CXXFLAGS="-O3 -fPIC" && ' @@ -35,7 +35,7 @@ configopts = "-Ss f77lib '-L$(EBROOTGCC)/lib64 -lgfortran' " #configopts += '-b 64 -D c -DPentiumCPS=2500 ' # anselm configopts += '-b 64 -D c -DPentiumCPS=2300 ' -configopts += '--with-netlib-lapack-tarfile=/apps/easybuild/sources/a/ATLAS/lapack-%s.tgz ' % lapackver +configopts += '--with-netlib-lapack-tarfile=/apps/easybuild/sources/a/ATLAS/lapack-%s.tgz ' % local_lapackver configopts += '-Fa alg -fPIC' prebuildopts = 'cd build && ' preinstallopts = 'cd build && ' diff --git a/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14-serial.eb b/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14-serial.eb index 2a9051b7..a4914db6 100644 --- a/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14-serial.eb +++ b/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14-serial.eb @@ -1,11 +1,11 @@ name = 'Amber' version = '16' -ambertools_ver = '16' +local_ambertools_ver = '16' # Patch levels from http://ambermd.org/bugfixes16.html and # http://ambermd.org/bugfixesat.html patchlevels = (5, 14) # (AmberTools, Amber) versionsuffix = '-AmberTools-%s-patchlevel-%s-%s-serial' % ( - ambertools_ver, patchlevels[0], patchlevels[1]) + local_ambertools_ver, patchlevels[0], patchlevels[1]) homepage = 'http://ambermd.org/amber.html' description = """Amber (originally Assisted Model Building with Energy @@ -17,7 +17,7 @@ toolchainopts = {'usempi': False} sources = [ 'Amber%(version)s.tar.bz2', - 'AmberTools%s.tar.bz2' % ambertools_ver, + 'AmberTools%s.tar.bz2' % local_ambertools_ver, ] patches = ['Amber-%(version)s_fix-hardcoding.patch'] diff --git a/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14.eb b/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14.eb index f039a984..15b2b4df 100644 --- a/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14.eb +++ b/ARCHIVE/a/Amber/Amber-16-iomkl-2016.07-AmberTools-16-patchlevel-5-14.eb @@ -1,11 +1,11 @@ name = 'Amber' version = '16' -ambertools_ver = '16' +local_ambertools_ver = '16' # Patch levels from http://ambermd.org/bugfixes16.html and # http://ambermd.org/bugfixesat.html patchlevels = (5, 14) # (AmberTools, Amber) versionsuffix = '-AmberTools-%s-patchlevel-%s-%s' % ( - ambertools_ver, patchlevels[0], patchlevels[1]) + local_ambertools_ver, patchlevels[0], patchlevels[1]) homepage = 'http://ambermd.org/amber.html' description = """Amber (originally Assisted Model Building with Energy @@ -17,7 +17,7 @@ toolchainopts = {'usempi': True} sources = [ 'Amber%(version)s.tar.bz2', - 'AmberTools%s.tar.bz2' % ambertools_ver, + 'AmberTools%s.tar.bz2' % local_ambertools_ver, ] patches = ['Amber-%(version)s_fix-hardcoding.patch'] diff --git a/ARCHIVE/a/Amber/Amber-16-iomkl-2016.09-GCC-4.9.3-2.25-AmberTools-16-patchlevel-5-14-CUDA.eb b/ARCHIVE/a/Amber/Amber-16-iomkl-2016.09-GCC-4.9.3-2.25-AmberTools-16-patchlevel-5-14-CUDA.eb index 59b370f7..3b31c948 100644 --- a/ARCHIVE/a/Amber/Amber-16-iomkl-2016.09-GCC-4.9.3-2.25-AmberTools-16-patchlevel-5-14-CUDA.eb +++ b/ARCHIVE/a/Amber/Amber-16-iomkl-2016.09-GCC-4.9.3-2.25-AmberTools-16-patchlevel-5-14-CUDA.eb @@ -1,11 +1,11 @@ name = 'Amber' version = '16' -ambertools_ver = '16' +local_ambertools_ver = '16' # Patch levels from http://ambermd.org/bugfixes16.html and # http://ambermd.org/bugfixesat.html patchlevels = (5, 14) # (AmberTools, Amber) versionsuffix = '-AmberTools-%s-patchlevel-%s-%s-CUDA' % ( - ambertools_ver, patchlevels[0], patchlevels[1]) + local_ambertools_ver, patchlevels[0], patchlevels[1]) homepage = 'http://ambermd.org/amber.html' description = """Amber (originally Assisted Model Building with Energy @@ -17,7 +17,7 @@ toolchainopts = {'usempi': True} sources = [ 'Amber%(version)s.tar.bz2', - 'AmberTools%s.tar.bz2' % ambertools_ver, + 'AmberTools%s.tar.bz2' % local_ambertools_ver, ] patches = ['Amber-%(version)s_fix-hardcoding.patch', diff --git a/ARCHIVE/a/AmberTools/AmberTools-15-intel-2015b-Python-2.7.11.eb b/ARCHIVE/a/AmberTools/AmberTools-15-intel-2015b-Python-2.7.11.eb index f385ce0a..655c6fbb 100644 --- a/ARCHIVE/a/AmberTools/AmberTools-15-intel-2015b-Python-2.7.11.eb +++ b/ARCHIVE/a/AmberTools/AmberTools-15-intel-2015b-Python-2.7.11.eb @@ -18,17 +18,17 @@ description = """Amber (originally Assisted Model Building with Energy toolchain = {'name': 'intel', 'version': '2016a'} toolchainopts = {'openmp': False, 'usempi': True} -ambertools_ver = '15' +local_ambertools_ver = '15' sources = [ # 'Amber%(version)s.tar.bz2', - 'AmberTools%s.tar.bz2' % ambertools_ver, + 'AmberTools%s.tar.bz2' % local_ambertools_ver, ] configopts = '--no-updates' # patches = [ # 'Amber-%(version)s_fix-hardcoding.patch', -# 'AmberTools-%s_fix-mdgx-print-bug.patch' % ambertools_ver, +# 'AmberTools-%s_fix-mdgx-print-bug.patch' % local_ambertools_ver, #] dependencies = [ @@ -38,8 +38,8 @@ dependencies = [ ('Python', '2.7.11'), ] -patchlevels = (13, 13) -patchruns = 1 +local_patchlevels = (13, 13) +local_patchruns = 1 versionsuffix = '-Python-2.7.11)' diff --git a/ARCHIVE/a/AmberTools/AmberTools-16-intel-2015b-Python-2.7.11.eb b/ARCHIVE/a/AmberTools/AmberTools-16-intel-2015b-Python-2.7.11.eb index f3864182..8fd84c6d 100644 --- a/ARCHIVE/a/AmberTools/AmberTools-16-intel-2015b-Python-2.7.11.eb +++ b/ARCHIVE/a/AmberTools/AmberTools-16-intel-2015b-Python-2.7.11.eb @@ -11,14 +11,14 @@ description = """Amber (originally Assisted Model Building with Energy toolchain = {'name': 'intel', 'version': '2015b'} toolchainopts = {'openmp': False, 'usempi': True} -ambertools_ver = '16' +local_ambertools_ver = '16' sources = [ # 'Amber%(version)s.tar.bz2', - 'AmberTools%s.tar.bz2' % ambertools_ver, + 'AmberTools%s.tar.bz2' % local_ambertools_ver, ] patches = [ # 'Amber-%(version)s_fix-hardcoding.patch', - 'AmberTools-%s_fix-mdgx-print-bug.patch' % ambertools_ver, + 'AmberTools-%s_fix-mdgx-print-bug.patch' % local_ambertools_ver, ] dependencies = [ @@ -28,10 +28,10 @@ dependencies = [ ('Python', '2.7.11'), ] -patchlevels = (13, 13) -patchruns = 1 +local_patchlevels = (13, 13) +local_patchruns = 1 versionsuffix = '-AmberTools-%s-patchlevel-%d-%d' % ( - ambertools_ver, patchlevels[0], patchlevels[1]) + local_ambertools_ver, local_patchlevels[0], local_patchlevels[1]) moduleclass = 'chem' diff --git a/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_66.eb b/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_66.eb index c91d2286..05c3dde8 100644 --- a/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_66.eb +++ b/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_66.eb @@ -11,10 +11,10 @@ toolchain = {'name': 'foss', 'version': '2015b'} source_urls = [SOURCEFORGE_SOURCE] sources = ['%(name)s_%(version)s.tar.gz'] -java = 'Java' -javaver = '1.8.0_66' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver, '', True)] +local_java = 'Java' +local_javaver = '1.8.0_66' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver, '', True)] prebuildopts = 'cd jni && ' diff --git a/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_74.eb b/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_74.eb index 0ffbea9d..b3384dd3 100644 --- a/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_74.eb +++ b/ARCHIVE/b/BBMap/BBMap-35.82-foss-2015b-Java-1.8.0_74.eb @@ -11,10 +11,10 @@ toolchain = {'name': 'foss', 'version': '2015b'} source_urls = [SOURCEFORGE_SOURCE] sources = ['%(name)s_%(version)s.tar.gz'] -java = 'Java' -javaver = '1.8.0_74' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver, '', True)] +local_java = 'Java' +local_javaver = '1.8.0_74' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver, '', True)] prebuildopts = 'cd jni && ' diff --git a/ARCHIVE/b/Biopython/Biopython-1.61-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/b/Biopython/Biopython-1.61-goolf-1.4.10-Python-2.7.3.eb index 52432c15..7c4c17b9 100644 --- a/ARCHIVE/b/Biopython/Biopython-1.61-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/b/Biopython/Biopython-1.61-goolf-1.4.10-Python-2.7.3.eb @@ -22,22 +22,22 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['http://biopython.org/DIST'] sources = ['%(namelower)s-%(version)s.tar.gz'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' local_pyshortver = '.'.join(local_pyver.split('.')[:2]) -versionsuffix = "-%s-%s" % (python, local_pyver) +versionsuffix = "-%s-%s" % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('numpy', '1.6.2', versionsuffix) ] sanity_check_paths = { 'files': [], 'dirs': [ - 'lib/python%s/site-packages/Bio' % - local_pyshortver, 'lib/python%s/site-packages/biopython-%s-py%s.egg-info' % - (local_pyshortver, version, local_pyshortver), 'lib/python%s/site-packages/BioSQL' % + 'lib/local_python%s/site-packages/Bio' % + local_pyshortver, 'lib/local_python%s/site-packages/biopython-%s-py%s.egg-info' % + (local_pyshortver, version, local_pyshortver), 'lib/local_python%s/site-packages/BioSQL' % local_pyshortver]} options = {'modulename': 'Bio'} diff --git a/ARCHIVE/b/Biopython/Biopython-1.61-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/b/Biopython/Biopython-1.61-ictce-5.3.0-Python-2.7.3.eb index 51a9d8b8..5e925e43 100644 --- a/ARCHIVE/b/Biopython/Biopython-1.61-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/b/Biopython/Biopython-1.61-ictce-5.3.0-Python-2.7.3.eb @@ -22,22 +22,22 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = ['http://biopython.org/DIST'] sources = ['%(namelower)s-%(version)s.tar.gz'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' local_pyshortver = '.'.join(local_pyver.split('.')[:2]) -versionsuffix = "-%s-%s" % (python, local_pyver) +versionsuffix = "-%s-%s" % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('numpy', '1.6.2', versionsuffix) ] sanity_check_paths = { 'files': [], 'dirs': [ - 'lib/python%s/site-packages/Bio' % - local_pyshortver, 'lib/python%s/site-packages/biopython-%s-py%s.egg-info' % - (local_pyshortver, version, local_pyshortver), 'lib/python%s/site-packages/BioSQL' % + 'lib/local_python%s/site-packages/Bio' % + local_pyshortver, 'lib/local_python%s/site-packages/biopython-%s-py%s.egg-info' % + (local_pyshortver, version, local_pyshortver), 'lib/local_python%s/site-packages/BioSQL' % local_pyshortver]} options = {'modulename': 'Bio'} diff --git a/ARCHIVE/b/Boost/Boost-1.49.0-goolf-1.5.16-Python-2.7.3.eb b/ARCHIVE/b/Boost/Boost-1.49.0-goolf-1.5.16-Python-2.7.3.eb index 0903643e..3268a354 100644 --- a/ARCHIVE/b/Boost/Boost-1.49.0-goolf-1.5.16-Python-2.7.3.eb +++ b/ARCHIVE/b/Boost/Boost-1.49.0-goolf-1.5.16-Python-2.7.3.eb @@ -10,12 +10,12 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.3' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.3' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6'), - ('Python', pythonversion), + ('Python', local_pythonversion), ] # also build boost_mpi diff --git a/ARCHIVE/b/Boost/Boost-1.58.0-foss-2015g-Python-2.7.9.eb b/ARCHIVE/b/Boost/Boost-1.58.0-foss-2015g-Python-2.7.9.eb index 764b67b4..7ef1be9a 100644 --- a/ARCHIVE/b/Boost/Boost-1.58.0-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/b/Boost/Boost-1.58.0-foss-2015g-Python-2.7.9.eb @@ -11,13 +11,13 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.9' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.9' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6'), ('zlib', '1.2.8'), - ('Python', pythonversion), + ('Python', local_pythonversion), ] # also build boost_mpi diff --git a/ARCHIVE/b/Boost/Boost-1.58.0-ictce-7.3.5-Python-2.7.9.eb b/ARCHIVE/b/Boost/Boost-1.58.0-ictce-7.3.5-Python-2.7.9.eb index 0a5e8bf6..be5868cf 100644 --- a/ARCHIVE/b/Boost/Boost-1.58.0-ictce-7.3.5-Python-2.7.9.eb +++ b/ARCHIVE/b/Boost/Boost-1.58.0-ictce-7.3.5-Python-2.7.9.eb @@ -11,13 +11,13 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.9' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.9' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6'), ('zlib', '1.2.8'), - ('Python', pythonversion), + ('Python', local_pythonversion), ] # also build boost_mpi diff --git a/ARCHIVE/b/Boost/Boost-1.58.0-intel-2015b-Python-2.7.9.eb b/ARCHIVE/b/Boost/Boost-1.58.0-intel-2015b-Python-2.7.9.eb index d1051a75..e2530d38 100644 --- a/ARCHIVE/b/Boost/Boost-1.58.0-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/b/Boost/Boost-1.58.0-intel-2015b-Python-2.7.9.eb @@ -10,13 +10,13 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.9' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.9' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6'), ('zlib', '1.2.8'), - ('Python', pythonversion), + ('Python', local_pythonversion), ] # also build boost_mpi diff --git a/ARCHIVE/b/Boost/Boost-1.60.0-CrayGNU-2016.03-Python-2.7.11.eb b/ARCHIVE/b/Boost/Boost-1.60.0-CrayGNU-2016.03-Python-2.7.11.eb index 24c748d9..1da328b9 100644 --- a/ARCHIVE/b/Boost/Boost-1.60.0-CrayGNU-2016.03-Python-2.7.11.eb +++ b/ARCHIVE/b/Boost/Boost-1.60.0-CrayGNU-2016.03-Python-2.7.11.eb @@ -14,12 +14,12 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.bz2' % '_'.join(version.split('.'))] -pythonversion = '2.7.11' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.11' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6'), - ('Python', pythonversion), + ('Python', local_pythonversion), ] # also build boost_mpi diff --git a/ARCHIVE/b/Boost/Boost-1.60.0-foss-2015g-Python-2.7.9.eb b/ARCHIVE/b/Boost/Boost-1.60.0-foss-2015g-Python-2.7.9.eb index 2887ffaf..9c821059 100644 --- a/ARCHIVE/b/Boost/Boost-1.60.0-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/b/Boost/Boost-1.60.0-foss-2015g-Python-2.7.9.eb @@ -11,13 +11,13 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.9' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.9' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6'), ('zlib', '1.2.8'), - ('Python', pythonversion), + ('Python', local_pythonversion), ] # also build boost_mpi diff --git a/ARCHIVE/b/Boost/Boost-1.63.0-foss-2016a-Python-2.7.13.eb b/ARCHIVE/b/Boost/Boost-1.63.0-foss-2016a-Python-2.7.13.eb index 13ea4be4..25012a96 100644 --- a/ARCHIVE/b/Boost/Boost-1.63.0-foss-2016a-Python-2.7.13.eb +++ b/ARCHIVE/b/Boost/Boost-1.63.0-foss-2016a-Python-2.7.13.eb @@ -10,13 +10,13 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.13' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.13' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6', '', True), ('zlib', '1.2.11', '', True), - ('Python', pythonversion, '', True) + ('Python', local_pythonversion, '', True) ] configopts = '--with-python=$EBROOTPYTHON/bin/python' diff --git a/ARCHIVE/b/Boost/Boost-1.63.0-foss-2017a-Python-2.7.13.eb b/ARCHIVE/b/Boost/Boost-1.63.0-foss-2017a-Python-2.7.13.eb index 554a7b6e..46641705 100644 --- a/ARCHIVE/b/Boost/Boost-1.63.0-foss-2017a-Python-2.7.13.eb +++ b/ARCHIVE/b/Boost/Boost-1.63.0-foss-2017a-Python-2.7.13.eb @@ -10,13 +10,13 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.13' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.13' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6', '', True), ('zlib', '1.2.11', '', True), - ('Python', pythonversion, '', True) + ('Python', local_pythonversion, '', True) ] configopts = '--with-python=$EBROOTPYTHON/bin/python' diff --git a/ARCHIVE/b/Boost/Boost-1.63.0-intel-2017a-Python-2.7.13.eb b/ARCHIVE/b/Boost/Boost-1.63.0-intel-2017a-Python-2.7.13.eb index 06347752..d77ff2b4 100644 --- a/ARCHIVE/b/Boost/Boost-1.63.0-intel-2017a-Python-2.7.13.eb +++ b/ARCHIVE/b/Boost/Boost-1.63.0-intel-2017a-Python-2.7.13.eb @@ -10,13 +10,13 @@ toolchainopts = {'pic': True, 'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['%%(namelower)s_%s.tar.gz' % '_'.join(version.split('.'))] -pythonversion = '2.7.13' -versionsuffix = '-Python-%s' % pythonversion +local_pythonversion = '2.7.13' +versionsuffix = '-Python-%s' % local_pythonversion dependencies = [ ('bzip2', '1.0.6', '', True), ('zlib', '1.2.11', '', True), - ('Python', pythonversion, '', True) + ('Python', local_pythonversion, '', True) ] configopts = '--with-python=$EBROOTPYTHON/bin/python ' diff --git a/ARCHIVE/c/CFITSIO/CFITSIO-3.37-intel-2015a.eb b/ARCHIVE/c/CFITSIO/CFITSIO-3.37-intel-2015a.eb index 08e0bf17..fada250f 100644 --- a/ARCHIVE/c/CFITSIO/CFITSIO-3.37-intel-2015a.eb +++ b/ARCHIVE/c/CFITSIO/CFITSIO-3.37-intel-2015a.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'intel', 'version': '2015a'} toolchainopts = {'optarch': True, 'pic': True} -srcversion = '%s0' % version.replace('.', '') +local_srcversion = '%s0' % version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ["lib/libcfitsio.a"], diff --git a/ARCHIVE/c/CFITSIO/CFITSIO-3.38-foss-2016a.eb b/ARCHIVE/c/CFITSIO/CFITSIO-3.38-foss-2016a.eb index 654a6284..e53d4e80 100644 --- a/ARCHIVE/c/CFITSIO/CFITSIO-3.38-foss-2016a.eb +++ b/ARCHIVE/c/CFITSIO/CFITSIO-3.38-foss-2016a.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'foss', 'version': '2016a'} toolchainopts = {'optarch': True, 'pic': True} -srcversion = '%s0' % version.replace('.', '') +local_srcversion = '%s0' % version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ["lib/libcfitsio.a"], diff --git a/ARCHIVE/c/CFITSIO/CFITSIO-3.38-intel-2016a.eb b/ARCHIVE/c/CFITSIO/CFITSIO-3.38-intel-2016a.eb index 6291c971..c74a74b8 100644 --- a/ARCHIVE/c/CFITSIO/CFITSIO-3.38-intel-2016a.eb +++ b/ARCHIVE/c/CFITSIO/CFITSIO-3.38-intel-2016a.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'intel', 'version': '2016a'} toolchainopts = {'optarch': True, 'pic': True} -srcversion = '%s0' % version.replace('.', '') +local_srcversion = '%s0' % version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ["lib/libcfitsio.a"], diff --git a/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-goolf-1.4.10-Python-2.7.3.eb index 071eb016..d5c1e5ce 100644 --- a/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-goolf-1.4.10-Python-2.7.3.eb @@ -15,20 +15,20 @@ sources = [SOURCELOWER_TAR_GZ] patches = ['CVXOPT-blas-lapack.patch'] -python = 'Python' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % (local_python, local_pythonver) dependencies = [ - (python, pythonver), + (local_python, local_pythonver), ] start_dir = 'src' sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/%%(namelower)s' % pythonshortver], + 'dirs': ['lib/local_python%s/site-packages/%%(namelower)s' % local_pythonshortver], } moduleclass = 'math' diff --git a/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-ictce-5.3.0-Python-2.7.3.eb index 3e32468f..e55d09b1 100644 --- a/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/c/CVXOPT/CVXOPT-1.1.5-ictce-5.3.0-Python-2.7.3.eb @@ -16,20 +16,20 @@ sources = [SOURCELOWER_TAR_GZ] patches = ['CVXOPT-blas-lapack.patch'] -python = 'Python' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % (local_python, local_pythonver) dependencies = [ - (python, pythonver), + (local_python, local_pythonver), ] start_dir = 'src' sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/%%(namelower)s' % pythonshortver], + 'dirs': ['lib/local_python%s/site-packages/%%(namelower)s' % local_pythonshortver], } moduleclass = 'math' diff --git a/ARCHIVE/c/Caffe/Caffe-1.0-foss-2016a-CUDA-8.0.44-Python-2.7.13.eb b/ARCHIVE/c/Caffe/Caffe-1.0-foss-2016a-CUDA-8.0.44-Python-2.7.13.eb index f3c87c9e..ce0850e1 100644 --- a/ARCHIVE/c/Caffe/Caffe-1.0-foss-2016a-CUDA-8.0.44-Python-2.7.13.eb +++ b/ARCHIVE/c/Caffe/Caffe-1.0-foss-2016a-CUDA-8.0.44-Python-2.7.13.eb @@ -3,8 +3,8 @@ easyblock = 'CMakeMake' name = 'Caffe' version = '1.0' -cudaversion = '8.0.44' -versionsuffix = '-CUDA-%s-Python-%%(local_pyver)s' % cudaversion +local_cudaversion = '8.0.44' +versionsuffix = '-CUDA-%s-Python-%%(local_pyver)s' % local_cudaversion homepage = 'https://github.com/BVLC/caffe' description = """ @@ -23,19 +23,19 @@ builddependencies = [ ('CMake', '3.8.1', '', True), ] -protobuf_ver = '3.2.0' +local_protobuf_ver = '3.2.0' dependencies = [ ('glog', '0.3.4', '', True), ('gflags', '2.1.2', '', True), ('OpenCV', '3.1.0', '', True), - ('CUDA', cudaversion, '', True), - ('cuDNN', '5.1', '-CUDA-%s' % cudaversion, True), + ('CUDA', local_cudaversion, '', True), + ('cuDNN', '5.1', '-CUDA-%s' % local_cudaversion, True), ('LMDB', '0.9.18', '', True), ('LevelDB', '1.18', '', True), ('snappy', '1.1.3', '', True), - ('protobuf', protobuf_ver), - # ('protobuf-python', protobuf_ver, '-Python-%(local_pyver)s'), + ('protobuf', local_protobuf_ver), + # ('protobuf-python', local_protobuf_ver, '-Python-%(local_pyver)s'), ('HDF5', '1.8.16', '-serial'), ('Boost', '1.63.0', '-Python-%(local_pyver)s'), ('Python', '2.7.13', '', True), diff --git a/ARCHIVE/c/Cantera/Cantera-2.2.1-intel-2016b-Python-2.7.12.eb b/ARCHIVE/c/Cantera/Cantera-2.2.1-intel-2016b-Python-2.7.12.eb index 4b512f5c..dbca7ce9 100644 --- a/ARCHIVE/c/Cantera/Cantera-2.2.1-intel-2016b-Python-2.7.12.eb +++ b/ARCHIVE/c/Cantera/Cantera-2.2.1-intel-2016b-Python-2.7.12.eb @@ -22,11 +22,11 @@ builddependencies = [ ('3to2', '1.1.1', versionsuffix), ] -common_opts = 'env_vars=all CC="$CC" CXX="$CXX" blas_lapack_libs=mkl_rt blas_lapack_dir=$BLAS_LAPACK_LIB_DIR' -common_opts += ' sundials_include=$EBROOTSUNDIALS/include sundials_libdir=$EBROOTSUNDIALS/lib' -buildopts = 'build ' + common_opts -runtest = 'test ' + common_opts -buildopts = 'install ' + common_opts +local_common_opts = 'env_vars=all CC="$CC" CXX="$CXX" blas_lapack_libs=mkl_rt blas_lapack_dir=$BLAS_LAPACK_LIB_DIR' +local_common_opts += ' sundials_include=$EBROOTSUNDIALS/include sundials_libdir=$EBROOTSUNDIALS/lib' +buildopts = 'build ' + local_common_opts +runtest = 'test ' + local_common_opts +buildopts = 'install ' + local_common_opts prefix_arg = 'prefix=' modextrapaths = {'PYTHONPATH': ['lib/python%(local_pyshortver)s/site-packages']} diff --git a/ARCHIVE/c/Commet/Commet-20150415-foss-2016a-Python-2.7.11.eb b/ARCHIVE/c/Commet/Commet-20150415-foss-2016a-Python-2.7.11.eb index e9b59c8b..ca220acb 100644 --- a/ARCHIVE/c/Commet/Commet-20150415-foss-2016a-Python-2.7.11.eb +++ b/ARCHIVE/c/Commet/Commet-20150415-foss-2016a-Python-2.7.11.eb @@ -2,7 +2,7 @@ easyblock = 'MakeCp' name = 'Commet' version = '20150415' -commit = '4ef0705' +local_commit = '4ef0705' versionsuffix = '-Python-%(local_pyver)s' homepage = 'https://colibread.inria.fr/software/commet/' @@ -13,7 +13,7 @@ description = """ COMMET ("COmpare Multiple METagenomes") provides a global simi toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['https://github.com/pierrepeterlongo/commet/archive'] -sources = ['%s.tar.gz' % commit] +sources = ['%s.tar.gz' % local_commit] checksums = ['19cba09ca7a92eaed75ed6af820d9451'] diff --git a/ARCHIVE/c/Cython/Cython-0.16-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/c/Cython/Cython-0.16-goolf-1.4.10-Python-2.7.3.eb index fa53744e..bcc44e38 100644 --- a/ARCHIVE/c/Cython/Cython-0.16-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/c/Cython/Cython-0.16-goolf-1.4.10-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = 'Cython' version = '0.16' -homepage = 'https://pypi.python.org/pypi/Cython/' +homepage = 'https://pypi.local_python.org/pypi/Cython/' description = """The Cython language makes writing C extensions for the Python language as easy as Python itself. Cython is a source code translator based on the well-known Pyrex, but supports more cutting edge functionality and optimizations.""" @@ -12,17 +12,17 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -pylibdir = 'lib/python%s/site-packages' % pythonshortver -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +local_pylibdir = 'lib/local_python%s/site-packages' % local_pythonshortver +versionsuffix = '-%s-%s' % (local_python, local_pythonver) -dependencies = [(python, pythonver)] +dependencies = [(local_python, local_pythonver)] sanity_check_paths = { - 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % pylibdir], - 'dirs': ['%s/%%(name)s' % pylibdir], + 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % local_pylibdir], + 'dirs': ['%s/%%(name)s' % local_pylibdir], } moduleclass = 'lang' diff --git a/ARCHIVE/c/Cython/Cython-0.16-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/c/Cython/Cython-0.16-ictce-5.3.0-Python-2.7.3.eb index f2fb2774..81c06e3d 100644 --- a/ARCHIVE/c/Cython/Cython-0.16-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/c/Cython/Cython-0.16-ictce-5.3.0-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = 'Cython' version = '0.16' -homepage = 'https://pypi.python.org/pypi/Cython/' +homepage = 'https://pypi.local_python.org/pypi/Cython/' description = """The Cython language makes writing C extensions for the Python language as easy as Python itself. Cython is a source code translator based on the well-known Pyrex, but supports more cutting edge functionality and optimizations.""" @@ -12,17 +12,17 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -pylibdir = 'lib/python%s/site-packages' % pythonshortver -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +local_pylibdir = 'lib/local_python%s/site-packages' % local_pythonshortver +versionsuffix = '-%s-%s' % (local_python, local_pythonver) -dependencies = [(python, pythonver)] +dependencies = [(local_python, local_pythonver)] sanity_check_paths = { - 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % pylibdir], - 'dirs': ['%s/%%(name)s' % pylibdir], + 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % local_pylibdir], + 'dirs': ['%s/%%(name)s' % local_pylibdir], } moduleclass = 'lang' diff --git a/ARCHIVE/c/Cython/Cython-0.19.1-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/c/Cython/Cython-0.19.1-goolf-1.4.10-Python-2.7.3.eb index 0e8ac631..a965556e 100644 --- a/ARCHIVE/c/Cython/Cython-0.19.1-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/c/Cython/Cython-0.19.1-goolf-1.4.10-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = 'Cython' version = '0.19.1' -homepage = 'https://pypi.python.org/pypi/Cython/' +homepage = 'https://pypi.local_python.org/pypi/Cython/' description = """The Cython language makes writing C extensions for the Python language as easy as Python itself. Cython is a source code translator based on the well-known Pyrex, but supports more cutting edge functionality and optimizations.""" @@ -12,17 +12,17 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -pylibdir = 'lib/python%s/site-packages' % pythonshortver -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +local_pylibdir = 'lib/local_python%s/site-packages' % local_pythonshortver +versionsuffix = '-%s-%s' % (local_python, local_pythonver) -dependencies = [(python, pythonver)] +dependencies = [(local_python, local_pythonver)] sanity_check_paths = { - 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % pylibdir], - 'dirs': ['%s/%%(name)s' % pylibdir], + 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % local_pylibdir], + 'dirs': ['%s/%%(name)s' % local_pylibdir], } moduleclass = 'lang' diff --git a/ARCHIVE/c/Cython/Cython-0.19.1-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/c/Cython/Cython-0.19.1-ictce-5.3.0-Python-2.7.3.eb index 6ba8ee33..0933b77b 100644 --- a/ARCHIVE/c/Cython/Cython-0.19.1-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/c/Cython/Cython-0.19.1-ictce-5.3.0-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = 'Cython' version = '0.19.1' -homepage = 'https://pypi.python.org/pypi/Cython/' +homepage = 'https://pypi.local_python.org/pypi/Cython/' description = """The Cython language makes writing C extensions for the Python language as easy as Python itself. Cython is a source code translator based on the well-known Pyrex, but supports more cutting edge functionality and optimizations.""" @@ -12,17 +12,17 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -pylibdir = 'lib/python%s/site-packages' % pythonshortver -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +local_pylibdir = 'lib/local_python%s/site-packages' % local_pythonshortver +versionsuffix = '-%s-%s' % (local_python, local_pythonver) -dependencies = [(python, pythonver)] +dependencies = [(local_python, local_pythonver)] sanity_check_paths = { - 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % pylibdir], - 'dirs': ['%s/%%(name)s' % pylibdir], + 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % local_pylibdir], + 'dirs': ['%s/%%(name)s' % local_pylibdir], } moduleclass = 'lang' diff --git a/ARCHIVE/c/Cython/Cython-0.19.2-ictce-5.5.0-Python-2.7.6.eb b/ARCHIVE/c/Cython/Cython-0.19.2-ictce-5.5.0-Python-2.7.6.eb index 80955e4c..7587bb55 100644 --- a/ARCHIVE/c/Cython/Cython-0.19.2-ictce-5.5.0-Python-2.7.6.eb +++ b/ARCHIVE/c/Cython/Cython-0.19.2-ictce-5.5.0-Python-2.7.6.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = 'Cython' version = '0.19.2' -homepage = 'https://pypi.python.org/pypi/Cython/' +homepage = 'https://pypi.local_python.org/pypi/Cython/' description = """The Cython language makes writing C extensions for the Python language as easy as Python itself. Cython is a source code translator based on the well-known Pyrex, but supports more cutting edge functionality and optimizations.""" @@ -12,17 +12,17 @@ toolchain = {'name': 'ictce', 'version': '5.5.0'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonver = '2.7.6' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -pylibdir = 'lib/python%s/site-packages' % pythonshortver -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.6' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +local_pylibdir = 'lib/local_python%s/site-packages' % local_pythonshortver +versionsuffix = '-%s-%s' % (local_python, local_pythonver) -dependencies = [(python, pythonver)] +dependencies = [(local_python, local_pythonver)] sanity_check_paths = { - 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % pylibdir], - 'dirs': ['%s/%%(name)s' % pylibdir], + 'files': ['bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % local_pylibdir], + 'dirs': ['%s/%%(name)s' % local_pylibdir], } moduleclass = 'lang' diff --git a/ARCHIVE/c/Cython/Cython-0.22-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/c/Cython/Cython-0.22-goolf-1.4.10-Python-2.7.3.eb index cff68c68..91de6577 100644 --- a/ARCHIVE/c/Cython/Cython-0.22-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/c/Cython/Cython-0.22-goolf-1.4.10-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = 'Cython' version = '0.22' -homepage = 'https://pypi.python.org/pypi/Cython/' +homepage = 'https://pypi.local_python.org/pypi/Cython/' description = """The Cython language makes writing C extensions for the Python language as easy as Python itself. Cython is a source code translator based on the well-known Pyrex, but supports more cutting edge functionality and optimizations.""" @@ -12,24 +12,24 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = [PYPI_SOURCE] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' -pythonver = '2.7.3' -versionsuffix = '-%s-%s' % (python, pythonver) -local_pyshortver = '.'.join(pythonver.split('.')[0:2]) -cythonlibdir = 'lib/python' + local_pyshortver + \ +local_python = 'Python' +local_pythonver = '2.7.3' +versionsuffix = '-%s-%s' % (local_python, local_pythonver) +local_pyshortver = '.'.join(local_pythonver.split('.')[0:2]) +local_cythonlibdir = 'lib/local_python' + local_pyshortver + \ '/site-packages/Cython-%(version)s-py' + local_pyshortver + '-linux-x86_64.egg' -dependencies = [(python, pythonver)] +dependencies = [(local_python, local_pythonver)] sanity_check_paths = { 'files': [ 'bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % - cythonlibdir], + local_cythonlibdir], 'dirs': [ '%s/%%(name)s' % - cythonlibdir], + local_cythonlibdir], } moduleclass = 'lang' diff --git a/ARCHIVE/c/Cython/Cython-0.23.4-gimkl-2.11.5-Python-2.7.10.eb b/ARCHIVE/c/Cython/Cython-0.23.4-gimkl-2.11.5-Python-2.7.10.eb index 1239c98a..f5e263de 100644 --- a/ARCHIVE/c/Cython/Cython-0.23.4-gimkl-2.11.5-Python-2.7.10.eb +++ b/ARCHIVE/c/Cython/Cython-0.23.4-gimkl-2.11.5-Python-2.7.10.eb @@ -15,15 +15,15 @@ sources = [SOURCE_TAR_GZ] dependencies = [('Python', '2.7.10')] -cythonlibdir = 'lib/python%(local_pyshortver)s/site-packages/Cython-%(version)s-py%(local_pyshortver)s-linux-x86_64.egg' +local_cythonlibdir = 'lib/python%(local_pyshortver)s/site-packages/Cython-%(version)s-py%(local_pyshortver)s-linux-x86_64.egg' sanity_check_paths = { 'files': [ 'bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % - cythonlibdir], + local_cythonlibdir], 'dirs': [ - cythonlibdir + + local_cythonlibdir + '/%(name)s']} moduleclass = 'lang' diff --git a/ARCHIVE/c/Cython/Cython-0.24.1-foss-2016a-Python-2.7.11.eb b/ARCHIVE/c/Cython/Cython-0.24.1-foss-2016a-Python-2.7.11.eb index ea63861a..d66d6406 100644 --- a/ARCHIVE/c/Cython/Cython-0.24.1-foss-2016a-Python-2.7.11.eb +++ b/ARCHIVE/c/Cython/Cython-0.24.1-foss-2016a-Python-2.7.11.eb @@ -15,15 +15,15 @@ sources = [SOURCE_TAR_GZ] dependencies = [('Python', '2.7.11')] -cythonlibdir = 'lib/python%(local_pyshortver)s/site-packages/Cython-%(version)s-py%(local_pyshortver)s-linux-x86_64.egg' +local_cythonlibdir = 'lib/python%(local_pyshortver)s/site-packages/Cython-%(version)s-py%(local_pyshortver)s-linux-x86_64.egg' sanity_check_paths = { 'files': [ 'bin/cygdb', 'bin/cython', '%s/%%(namelower)s.py' % - cythonlibdir], + local_cythonlibdir], 'dirs': [ - cythonlibdir + + local_cythonlibdir + '/%(name)s']} moduleclass = 'lang' diff --git a/ARCHIVE/c/cutadapt/cutadapt-1.5-goolf-1.4.10-Python-2.7.10.eb b/ARCHIVE/c/cutadapt/cutadapt-1.5-goolf-1.4.10-Python-2.7.10.eb index c7858af8..c94fc2ae 100644 --- a/ARCHIVE/c/cutadapt/cutadapt-1.5-goolf-1.4.10-Python-2.7.10.eb +++ b/ARCHIVE/c/cutadapt/cutadapt-1.5-goolf-1.4.10-Python-2.7.10.eb @@ -15,19 +15,19 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['http://cutadapt.googlecode.com/files/'] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' local_pyshortver = '.'.join(local_pyver.split('.')[:2]) -versionsuffix = "-%s-%s" % (python, local_pyver) +versionsuffix = "-%s-%s" % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ] sanity_check_paths = { 'files': [ - 'lib/python%s/site-packages/cutadapt/_align.%s' % + 'lib/local_python%s/site-packages/cutadapt/_align.%s' % (local_pyshortver, SHLIB_EXT)], 'dirs': [], } moduleclass = 'bio' diff --git a/ARCHIVE/d/DIAL/DIAL-2011.06.06-foss-2016a.eb b/ARCHIVE/d/DIAL/DIAL-2011.06.06-foss-2016a.eb index fd9d3a54..a3c463b2 100644 --- a/ARCHIVE/d/DIAL/DIAL-2011.06.06-foss-2016a.eb +++ b/ARCHIVE/d/DIAL/DIAL-2011.06.06-foss-2016a.eb @@ -20,7 +20,7 @@ dependencies = [ ('LASTZ', '1.02.00'), ] -binaries = [ +local_binaries = [ 'assemble', 'assemble1', 'assemble_illumina', @@ -42,7 +42,7 @@ binaries = [ ] sanity_check_paths = { - 'files': ['bin/%s' % binfile for binfile in binaries], + 'files': ['bin/%s' % binfile for binfile in local_binaries], 'dirs': ['bin'] } diff --git a/ARCHIVE/d/darshan/darshan-runtime-3.1.4-foss-2017a.eb b/ARCHIVE/d/darshan/darshan-runtime-3.1.4-foss-2017a.eb index 7e83650b..a0bd339f 100644 --- a/ARCHIVE/d/darshan/darshan-runtime-3.1.4-foss-2017a.eb +++ b/ARCHIVE/d/darshan/darshan-runtime-3.1.4-foss-2017a.eb @@ -37,13 +37,13 @@ sources = [ 'http://ftp.mcs.anl.gov/pub/darshan/releases/darshan-%s.tar.gz' % version] -subpath = 'darshan-runtime' -preconfigopts = 'cd %s;' % subpath +local_subpath = 'darshan-runtime' +preconfigopts = 'cd %s;' % local_subpath configopts = '--with-mem-align=8 --with-log-path-by-env=DARSHAN_LOG_PATH --with-jobid-env=SLURM_JOBID CC=mpicc' -prebuildopts = 'cd %s;' % subpath +prebuildopts = 'cd %s;' % local_subpath -preinstallopts = 'cd %s;' % subpath +preinstallopts = 'cd %s;' % local_subpath sanity_check_paths = { 'files': ["lib/libdarshan.so"], diff --git a/ARCHIVE/d/darshan/darshan-runtime-3.1.4-intel-2017b.eb b/ARCHIVE/d/darshan/darshan-runtime-3.1.4-intel-2017b.eb index b80bf16e..b267bd84 100644 --- a/ARCHIVE/d/darshan/darshan-runtime-3.1.4-intel-2017b.eb +++ b/ARCHIVE/d/darshan/darshan-runtime-3.1.4-intel-2017b.eb @@ -37,13 +37,13 @@ sources = [ 'http://ftp.mcs.anl.gov/pub/darshan/releases/darshan-%s.tar.gz' % version] -subpath = 'darshan-runtime' -preconfigopts = 'cd %s;' % subpath +local_subpath = 'darshan-runtime' +preconfigopts = 'cd %s;' % local_subpath configopts = '--with-mem-align=8 --with-log-path-by-env=DARSHAN_LOG_PATH --with-jobid-env=SLURM_JOBID CC=mpicc' -prebuildopts = 'cd %s;' % subpath +prebuildopts = 'cd %s;' % local_subpath -preinstallopts = 'cd %s;' % subpath +preinstallopts = 'cd %s;' % local_subpath sanity_check_paths = { 'files': ["lib/libdarshan.so"], diff --git a/ARCHIVE/d/darshan/darshan-util-3.1.4-foss-2017a.eb b/ARCHIVE/d/darshan/darshan-util-3.1.4-foss-2017a.eb index f3f9ffea..213ff858 100644 --- a/ARCHIVE/d/darshan/darshan-util-3.1.4-foss-2017a.eb +++ b/ARCHIVE/d/darshan/darshan-util-3.1.4-foss-2017a.eb @@ -36,13 +36,13 @@ sources = [ 'http://ftp.mcs.anl.gov/pub/darshan/releases/darshan-%s.tar.gz' % version] -subpath = 'darshan-util' +local_subpath = 'darshan-util' -preconfigopts = 'cd %s;' % subpath +preconfigopts = 'cd %s;' % local_subpath -prebuildopts = 'cd %s;' % subpath +prebuildopts = 'cd %s;' % local_subpath -preinstallopts = 'cd %s;' % subpath +preinstallopts = 'cd %s;' % local_subpath sanity_check_paths = { 'files': ["bin/darshan-job-summary.pl"], diff --git a/ARCHIVE/d/darshan/darshan-util-3.1.4-intel-2017b.eb b/ARCHIVE/d/darshan/darshan-util-3.1.4-intel-2017b.eb index d079fb84..5ad60bbe 100644 --- a/ARCHIVE/d/darshan/darshan-util-3.1.4-intel-2017b.eb +++ b/ARCHIVE/d/darshan/darshan-util-3.1.4-intel-2017b.eb @@ -36,13 +36,13 @@ sources = [ 'http://ftp.mcs.anl.gov/pub/darshan/releases/darshan-%s.tar.gz' % version] -subpath = 'darshan-util' +local_subpath = 'darshan-util' -preconfigopts = 'cd %s;' % subpath +preconfigopts = 'cd %s;' % local_subpath -prebuildopts = 'cd %s;' % subpath +prebuildopts = 'cd %s;' % local_subpath -preinstallopts = 'cd %s;' % subpath +preinstallopts = 'cd %s;' % local_subpath sanity_check_paths = { 'files': ["bin/darshan-job-summary.pl"], diff --git a/ARCHIVE/e/ELPA/ELPA-2015.02.002-intel-2018a.eb b/ARCHIVE/e/ELPA/ELPA-2015.02.002-intel-2018a.eb index f1186c82..09ac1e4a 100644 --- a/ARCHIVE/e/ELPA/ELPA-2015.02.002-intel-2018a.eb +++ b/ARCHIVE/e/ELPA/ELPA-2015.02.002-intel-2018a.eb @@ -28,12 +28,12 @@ builddependencies = [ preconfigopts = 'autoreconf && ' -common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 -nofor_main $FCFLAGS" ' -common_configopts += 'LIBS="$LIBSCALAPACK" ' +local_common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 -nofor_main $FCFLAGS" ' +local_common_configopts += 'LIBS="$LIBSCALAPACK" ' configopts = [ - common_configopts + '--enable-openmp ', - common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. + local_common_configopts + '--enable-openmp ', + local_common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. ] buildopts = ' V=1 ' diff --git a/ARCHIVE/e/ELPA/ELPA-2016.11.001.pre-intel-2017a.eb b/ARCHIVE/e/ELPA/ELPA-2016.11.001.pre-intel-2017a.eb index f3b61288..a969b18c 100644 --- a/ARCHIVE/e/ELPA/ELPA-2016.11.001.pre-intel-2017a.eb +++ b/ARCHIVE/e/ELPA/ELPA-2016.11.001.pre-intel-2017a.eb @@ -37,12 +37,12 @@ builddependencies = [ preconfigopts = 'autoreconf && ' -common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 $FCFLAGS" ' -common_configopts += 'LIBS="$LIBSCALAPACK" ' +local_common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 $FCFLAGS" ' +local_common_configopts += 'LIBS="$LIBSCALAPACK" ' configopts = [ - common_configopts + '--enable-openmp ', - common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. + local_common_configopts + '--enable-openmp ', + local_common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. ] # Autotools 20180311 makes configure create some files that causes problem diff --git a/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2017a.eb b/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2017a.eb index 6cabf808..cd8f5866 100644 --- a/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2017a.eb +++ b/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2017a.eb @@ -27,12 +27,12 @@ builddependencies = [ preconfigopts = 'autoreconf && ' -common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 $FCFLAGS" ' -common_configopts += 'LIBS="$LIBSCALAPACK" ' +local_common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 $FCFLAGS" ' +local_common_configopts += 'LIBS="$LIBSCALAPACK" ' configopts = [ - common_configopts + '--enable-openmp ', - common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. + local_common_configopts + '--enable-openmp ', + local_common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. ] buildopts = ' V=1 ' diff --git a/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2018a.eb b/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2018a.eb index 5c2be3bb..b7c584ae 100644 --- a/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2018a.eb +++ b/ARCHIVE/e/ELPA/ELPA-2017.11.001-intel-2018a.eb @@ -27,12 +27,12 @@ builddependencies = [ preconfigopts = 'autoreconf && ' -common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 $FCFLAGS" ' -common_configopts += 'LIBS="$LIBSCALAPACK" ' +local_common_configopts = 'FCFLAGS="-I$EBROOTIMKL/mkl/include/intel64/lp64 $FCFLAGS" ' +local_common_configopts += 'LIBS="$LIBSCALAPACK" ' configopts = [ - common_configopts + '--enable-openmp ', - common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. + local_common_configopts + '--enable-openmp ', + local_common_configopts, # Default version last, so we can get the normal config.h/config-f90.h installed afterwards. ] buildopts = ' V=1 ' diff --git a/ARCHIVE/f/FFTW/FFTW-3.3.4-intel-2015b.eb b/ARCHIVE/f/FFTW/FFTW-3.3.4-intel-2015b.eb index 8e1a2946..a9d0cb4d 100644 --- a/ARCHIVE/f/FFTW/FFTW-3.3.4-intel-2015b.eb +++ b/ARCHIVE/f/FFTW/FFTW-3.3.4-intel-2015b.eb @@ -14,13 +14,13 @@ toolchainopts = {'optarch': True, 'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" # no quad precision, requires GCC v4.6 or higher configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-sse2 --enable-mpi", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-sse2 --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/ARCHIVE/f/FFTW/FFTW-3.3.5-foss-2016a.eb b/ARCHIVE/f/FFTW/FFTW-3.3.5-foss-2016a.eb index 156a7ebf..e2462196 100644 --- a/ARCHIVE/f/FFTW/FFTW-3.3.5-foss-2016a.eb +++ b/ARCHIVE/f/FFTW/FFTW-3.3.5-foss-2016a.eb @@ -13,15 +13,15 @@ toolchainopts = {'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" # no quad precision, requires GCC v4.6 or higher # see also # http://www.fftw.org/doc/Extended-and-quadruple-precision-in-Fortran.html configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-sse2 --enable-mpi", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-sse2 --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2016a.eb b/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2016a.eb index 69321f23..011aa3b0 100644 --- a/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2016a.eb +++ b/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2016a.eb @@ -13,15 +13,15 @@ toolchainopts = {'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" # no quad precision, requires GCC v4.6 or higher # see also # http://www.fftw.org/doc/Extended-and-quadruple-precision-in-Fortran.html configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-sse2 --enable-mpi", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-sse2 --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017.00.eb b/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017.00.eb index b5872103..9970af0e 100644 --- a/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017.00.eb +++ b/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017.00.eb @@ -13,15 +13,15 @@ toolchainopts = {'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" # no quad precision, requires GCC v4.6 or higher # see also # http://www.fftw.org/doc/Extended-and-quadruple-precision-in-Fortran.html configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-sse2 --enable-mpi --enable-avx2", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-sse2 --enable-mpi --enable-avx2", # default as last ] sanity_check_paths = { diff --git a/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017a.eb b/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017a.eb index 6841188a..42326ba0 100644 --- a/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017a.eb +++ b/ARCHIVE/f/FFTW/FFTW-3.3.5-intel-2017a.eb @@ -13,15 +13,15 @@ toolchainopts = {'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" # no quad precision, requires GCC v4.6 or higher # see also # http://www.fftw.org/doc/Extended-and-quadruple-precision-in-Fortran.html configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-sse2 --enable-mpi --enable-avx2", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-sse2 --enable-mpi --enable-avx2", # default as last ] sanity_check_paths = { diff --git a/ARCHIVE/f/FFTW/FFTW-3.3.6-foss-2017a.eb b/ARCHIVE/f/FFTW/FFTW-3.3.6-foss-2017a.eb index 6aff10be..237f559e 100644 --- a/ARCHIVE/f/FFTW/FFTW-3.3.6-foss-2017a.eb +++ b/ARCHIVE/f/FFTW/FFTW-3.3.6-foss-2017a.eb @@ -14,13 +14,13 @@ source_urls = [homepage] sources = ['fftw-%(version)s-pl1.tar.gz'] checksums = ['682a0e78d6966ca37c7446d4ab4cc2a1'] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-quad-precision", - common_configopts + " --enable-sse2 --enable-mpi", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-quad-precision", + local_common_configopts + " --enable-sse2 --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2015b-Python-2.7.9.eb b/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2015b-Python-2.7.9.eb index 1871acb0..156253a8 100644 --- a/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2015b-Python-2.7.9.eb @@ -13,14 +13,14 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = ['https://bitbucket.org/fenics-project/fiat/downloads'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = ".".join(pythonversion.split('.')[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = ".".join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('ScientificPython', '2.9.4', versionsuffix), ('sympy', '0.7.6', versionsuffix), ] @@ -29,7 +29,7 @@ options = {'modulename': name} sanity_check_paths = { 'files': [''], - #'dirs': ['lib/python%s/site-packages/FIAT' % pythonshortversion], + #'dirs': ['lib/local_python%s/site-packages/FIAT' % local_pythonshortversion], 'dirs': [''], } diff --git a/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2016.01-Python-2.7.9.eb b/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2016.01-Python-2.7.9.eb index eb33a733..30ed35be 100644 --- a/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2016.01-Python-2.7.9.eb +++ b/ARCHIVE/f/FIAT/FIAT-1.6.0-intel-2016.01-Python-2.7.9.eb @@ -13,14 +13,14 @@ toolchain = {'name': 'intel', 'version': '2016.01'} source_urls = ['https://bitbucket.org/fenics-project/fiat/downloads'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = ".".join(pythonversion.split('.')[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = ".".join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('ScientificPython', '2.9.4', versionsuffix), ('sympy', '0.7.6', versionsuffix), ] diff --git a/ARCHIVE/f/foss/foss-2015b.eb b/ARCHIVE/f/foss/foss-2015b.eb index f7416b52..6ed3c478 100644 --- a/ARCHIVE/f/foss/foss-2015b.eb +++ b/ARCHIVE/f/foss/foss-2015b.eb @@ -15,8 +15,8 @@ local_tcver = '%s-local_binutils-%s' % (local_gccver, local_local_binutilsver) local_blaslib = 'OpenBLAS' local_blasver = '0.2.14' -blas = '%s-%s' % (local_blaslib, local_blasver) -blaslocal_suff = '-LAPACK-3.5.0' +local_blas = '%s-%s' % (local_blaslib, local_blasver) +local_blaslocal_suff = '-LAPACK-3.5.0' # toolchain used to build foss dependencies local_comp_mpi_tc_name = 'gompi' @@ -31,9 +31,9 @@ dependencies = [ ('GCC', local_gccver, '-local_binutils-%s' % local_local_binutilsver), ('binutils', local_local_binutilsver, '', ('GCC', local_tcver)), ('OpenMPI', '1.8.8', '', ('GNU', '%s-%s' % (local_gccver, local_local_binutilsver))), - (local_blaslib, local_blasver, blaslocal_suff, ('GNU', '%s-%s' % (local_gccver, local_local_binutilsver))), + (local_blaslib, local_blasver, local_blaslocal_suff, ('GNU', '%s-%s' % (local_gccver, local_local_binutilsver))), ('FFTW', '3.3.4', '', local_comp_mpi_tc), - ('ScaLAPACK', '2.0.2', '-%s%s' % (blas, blaslocal_suff), local_comp_mpi_tc), + ('ScaLAPACK', '2.0.2', '-%s%s' % (local_blas, local_blaslocal_suff), local_comp_mpi_tc), ] moduleclass = 'toolchain' diff --git a/ARCHIVE/f/foss/foss-2015e.eb b/ARCHIVE/f/foss/foss-2015e.eb index 17c8371f..683e6ccc 100644 --- a/ARCHIVE/f/foss/foss-2015e.eb +++ b/ARCHIVE/f/foss/foss-2015e.eb @@ -15,8 +15,8 @@ local_comp = (local_local_comp_name, local_local_comp_version) local_blaslib = 'OpenBLAS' local_blasver = '0.2.14' -blas = '%s-%s' % (local_blaslib, local_blasver) -blas_local_suff = '-LAPACK-3.5.0' +local_blas = '%s-%s' % (local_blaslib, local_blasver) +local_blas_local_suff = '-LAPACK-3.5.0' # toolchain used to build foss dependencies local_comp_mpi_tc_name = 'gompi' @@ -29,9 +29,9 @@ local_comp_mpi_tc = (local_comp_mpi_tc_name, local_comp_mpi_tc_ver) dependencies = [ local_comp, ('OpenMPI', '1.8.6', '', local_comp), # part of gompi-2015e - (local_blaslib, local_blasver, blas_local_suff, local_comp_mpi_tc), + (local_blaslib, local_blasver, local_blas_local_suff, local_comp_mpi_tc), ('FFTW', '3.3.4', '', local_comp_mpi_tc), - ('ScaLAPACK', '2.0.2', '-%s%s' % (blas, blas_local_suff), local_comp_mpi_tc) + ('ScaLAPACK', '2.0.2', '-%s%s' % (local_blas, local_blas_local_suff), local_comp_mpi_tc) ] moduleclass = 'toolchain' diff --git a/ARCHIVE/f/foss/foss-2015g.eb b/ARCHIVE/f/foss/foss-2015g.eb index 0e325f88..73f2e467 100644 --- a/ARCHIVE/f/foss/foss-2015g.eb +++ b/ARCHIVE/f/foss/foss-2015g.eb @@ -15,8 +15,8 @@ local_tcver = '%s-local_binutils-%s' % (local_gccver, local_local_binutilsver) local_blaslib = 'OpenBLAS' local_blasver = '0.2.14' -blas = '%s-%s' % (local_blaslib, local_blasver) -blaslocal_suff = '-LAPACK-3.5.0' +local_blas = '%s-%s' % (local_blaslib, local_blasver) +local_blaslocal_suff = '-LAPACK-3.5.0' # toolchain used to build foss dependencies local_comp_mpi_tc_name = 'gompi' @@ -31,9 +31,9 @@ dependencies = [ ('GCC', local_gccver, '-local_binutils-%s' % local_local_binutilsver), ('binutils', local_local_binutilsver, '', ('GCC', local_tcver)), ('OpenMPI', '1.8.8', '', ('GNU', '%s-%s' % (local_gccver, local_local_binutilsver))), - (local_blaslib, local_blasver, blaslocal_suff, ('GNU', '%s-%s' % (local_gccver, local_local_binutilsver))), + (local_blaslib, local_blasver, local_blaslocal_suff, ('GNU', '%s-%s' % (local_gccver, local_local_binutilsver))), ('FFTW', '3.3.4', '', local_comp_mpi_tc), - ('ScaLAPACK', '2.0.2', '-%s%s' % (blas, blaslocal_suff), local_comp_mpi_tc), + ('ScaLAPACK', '2.0.2', '-%s%s' % (local_blas, local_blaslocal_suff), local_comp_mpi_tc), ] moduleclass = 'toolchain' diff --git a/ARCHIVE/f/foss/foss-2016a.eb b/ARCHIVE/f/foss/foss-2016a.eb index 927abea7..2af86c5d 100644 --- a/ARCHIVE/f/foss/foss-2016a.eb +++ b/ARCHIVE/f/foss/foss-2016a.eb @@ -15,8 +15,8 @@ local_gccver = '4.9.3-2.25' local_blaslib = 'OpenBLAS' local_blasver = '0.2.15' -blas = '%s-%s' % (local_blaslib, local_blasver) -blaslocal_suff = '-LAPACK-3.6.0' +local_blas = '%s-%s' % (local_blaslib, local_blasver) +local_blaslocal_suff = '-LAPACK-3.6.0' # toolchain used to build foss dependencies local_comp_mpi_tc_name = 'gompi' @@ -29,9 +29,9 @@ local_comp_mpi_tc = (local_comp_mpi_tc_name, version) dependencies = [ ('GCC', local_gccver), ('OpenMPI', '1.10.7', '', ('GCC', local_gccver)), - (local_blaslib, local_blasver, blaslocal_suff, ('GCC', local_gccver)), + (local_blaslib, local_blasver, local_blaslocal_suff, ('GCC', local_gccver)), ('FFTW', '3.3.5', '', local_comp_mpi_tc), - ('ScaLAPACK', '2.0.2', '-%s%s' % (blas, blaslocal_suff), local_comp_mpi_tc), + ('ScaLAPACK', '2.0.2', '-%s%s' % (local_blas, local_blaslocal_suff), local_comp_mpi_tc), ] moduleclass = 'toolchain' diff --git a/ARCHIVE/f/foss/foss-2017b.eb b/ARCHIVE/f/foss/foss-2017b.eb index e731b338..4f659f16 100644 --- a/ARCHIVE/f/foss/foss-2017b.eb +++ b/ARCHIVE/f/foss/foss-2017b.eb @@ -15,7 +15,7 @@ local_gccver = '6.3.0-2.27' local_blaslib = 'OpenBLAS' local_blasver = '0.2.20' -blas = '%s-%s' % (local_blaslib, local_blasver) +local_blas = '%s-%s' % (local_blaslib, local_blasver) # toolchain used to build foss dependencies local_comp_mpi_tc_name = 'gompi' @@ -29,7 +29,7 @@ dependencies = [ ('OpenMPI', '2.1.5', '', ('GCC', local_gccver)), (local_blaslib, local_blasver, '', ('GCC', local_gccver)), ('FFTW', '3.3.6', '', local_comp_mpi_tc), - ('ScaLAPACK', '2.0.2', '-%s' % blas, local_comp_mpi_tc), + ('ScaLAPACK', '2.0.2', '-%s' % local_blas, local_comp_mpi_tc), ] moduleclass = 'toolchain' diff --git a/ARCHIVE/f/foss/foss-2018a.eb b/ARCHIVE/f/foss/foss-2018a.eb index 0cac4457..434b56e8 100644 --- a/ARCHIVE/f/foss/foss-2018a.eb +++ b/ARCHIVE/f/foss/foss-2018a.eb @@ -15,7 +15,7 @@ local_gccver = '6.3.0-2.27' local_blaslib = 'OpenBLAS' local_blasver = '0.2.20' -blas = '%s-%s' % (local_blaslib, local_blasver) +local_blas = '%s-%s' % (local_blaslib, local_blasver) # toolchain used to build foss dependencies local_comp_mpi_tc_name = 'gompi' @@ -29,7 +29,7 @@ dependencies = [ ('OpenMPI', '3.1.4', '', ('GCC', local_gccver)), (local_blaslib, local_blasver, '', ('GCC', local_gccver)), ('FFTW', '3.3.7', '', local_comp_mpi_tc), - ('ScaLAPACK', '2.0.2', '-%s' % blas, local_comp_mpi_tc), + ('ScaLAPACK', '2.0.2', '-%s' % local_blas, local_comp_mpi_tc), ] moduleclass = 'toolchain' diff --git a/ARCHIVE/f/foss/foss-2019a.eb b/ARCHIVE/f/foss/foss-2019a.eb index d4a7d2bd..cb1a0220 100644 --- a/ARCHIVE/f/foss/foss-2019a.eb +++ b/ARCHIVE/f/foss/foss-2019a.eb @@ -16,7 +16,7 @@ local_gccver = '8.3.0-2.32' local_blaslib = 'OpenBLAS' local_blasver = '0.2.20' -blas = '%s-%s' % (local_blaslib, local_blasver) +local_blas = '%s-%s' % (local_blaslib, local_blasver) # toolchain used to build foss dependencies local_comp_mpi_tc_name = 'gompi' @@ -30,7 +30,7 @@ dependencies = [ ('OpenMPI', '4.0.4', '-CUDA', ('GCC', local_gccver)), (local_blaslib, local_blasver, '', ('GCC', local_gccver)), ('FFTW', '3.3.8'), - ('ScaLAPACK', '2.0.2', '-%s' % blas, local_comp_mpi_tc), + ('ScaLAPACK', '2.0.2', '-%s' % local_blas, local_comp_mpi_tc), ] moduleclass = 'toolchain' diff --git a/ARCHIVE/f/freeglut/freeglut-3.0.0-foss-2016a-Mesa-11.2.1.eb b/ARCHIVE/f/freeglut/freeglut-3.0.0-foss-2016a-Mesa-11.2.1.eb index 5a0c7bba..8338e660 100644 --- a/ARCHIVE/f/freeglut/freeglut-3.0.0-foss-2016a-Mesa-11.2.1.eb +++ b/ARCHIVE/f/freeglut/freeglut-3.0.0-foss-2016a-Mesa-11.2.1.eb @@ -11,8 +11,8 @@ toolchain = {'name': 'foss', 'version': '2016a'} sources = [SOURCE_TAR_GZ] source_urls = ['http://prdownloads.sourceforge.net/%(name)s'] -mesa_ver = '11.2.1' -versionsuffix = '-Mesa-%s' % mesa_ver +local_mesa_ver = '11.2.1' +versionsuffix = '-Mesa-%s' % local_mesa_ver builddependencies = [('CMake', '3.4.3')] @@ -21,7 +21,7 @@ dependencies = [ ('libXext', '1.3.3'), ('libXrandr', '1.5.0'), ('libXi', '1.7.6'), - ('Mesa', mesa_ver), + ('Mesa', local_mesa_ver), ] configopts = ' -DX11_X11_LIB="$EBROOTLIBX11/lib/libX11.so" ' diff --git a/ARCHIVE/f/freeglut/freeglut-3.0.0-intel-2016a-Mesa-11.2.1.eb b/ARCHIVE/f/freeglut/freeglut-3.0.0-intel-2016a-Mesa-11.2.1.eb index cbf48903..09995e26 100644 --- a/ARCHIVE/f/freeglut/freeglut-3.0.0-intel-2016a-Mesa-11.2.1.eb +++ b/ARCHIVE/f/freeglut/freeglut-3.0.0-intel-2016a-Mesa-11.2.1.eb @@ -11,8 +11,8 @@ toolchain = {'name': 'intel', 'version': '2016a'} sources = [SOURCE_TAR_GZ] source_urls = ['http://prdownloads.sourceforge.net/%(name)s'] -mesa_ver = '11.2.1' -versionsuffix = '-Mesa-%s' % mesa_ver +local_mesa_ver = '11.2.1' +versionsuffix = '-Mesa-%s' % local_mesa_ver builddependencies = [('CMake', '3.4.3')] @@ -21,7 +21,7 @@ dependencies = [ ('libXext', '1.3.3'), ('libXrandr', '1.5.0'), ('libXi', '1.7.6'), - ('Mesa', mesa_ver), + ('Mesa', local_mesa_ver), ] configopts = ' -DX11_X11_LIB="$EBROOTLIBX11/lib/libX11.so" ' diff --git a/ARCHIVE/g/GMT/GMT-5.2.1-foss-2015g.eb b/ARCHIVE/g/GMT/GMT-5.2.1-foss-2015g.eb index d901988d..fe4494cf 100644 --- a/ARCHIVE/g/GMT/GMT-5.2.1-foss-2015g.eb +++ b/ARCHIVE/g/GMT/GMT-5.2.1-foss-2015g.eb @@ -12,14 +12,14 @@ description = """GMT is an open source collection of about 80 command-line tools toolchain = {'name': 'foss', 'version': '2015g'} -gshhg_ver = '2.3.4' -dcw_ver = '1.1.2' +local_gshhg_ver = '2.3.4' +local_dcw_ver = '1.1.2' sources = [ 'gmt-%(version)s-src.tar.gz', # coastlines, rivers, and political boundaries - 'gshhg-gmt-%s.tar.gz' % gshhg_ver, + 'gshhg-gmt-%s.tar.gz' % local_gshhg_ver, # country polygons - 'dcw-gmt-%s.tar.gz' % dcw_ver, + 'dcw-gmt-%s.tar.gz' % local_dcw_ver, ] # 'http://gmt.soest.hawaii.edu/files/download?name=' needs flash enabled browser @@ -46,8 +46,8 @@ dependencies = [ preconfigopts = "export CMAKE_LIBRARY_PATH=$LD_LIBRARY_PATH && " -configopts = '-DCOPY_GSHHG=TRUE -DGSHHG_ROOT=%%(builddir)s/gshhg-gmt-%s ' % gshhg_ver -configopts += '-DCOPY_DCW=TRUE -DDCW_ROOT=%%(builddir)s/dcw-gmt-%s ' % dcw_ver +configopts = '-DCOPY_GSHHG=TRUE -DGSHHG_ROOT=%%(builddir)s/gshhg-gmt-%s ' % local_gshhg_ver +configopts += '-DCOPY_DCW=TRUE -DDCW_ROOT=%%(builddir)s/dcw-gmt-%s ' % local_dcw_ver configopts += '-DHAVE_NETCDF4=1 ' separate_build_dir = True diff --git a/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2014b.eb b/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2014b.eb index f21decb6..e2e64ff1 100644 --- a/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2014b.eb +++ b/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2014b.eb @@ -15,8 +15,8 @@ toolchain = {'name': 'intel', 'version': '2014b'} source_urls = ['http://www.graphviz.org/pub/graphviz/stable/SOURCES/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.8' +local_python = "Python" +local_pythonversion = '2.7.8' dependencies = [ ('cairo', '1.12.18'), @@ -30,9 +30,9 @@ dependencies = [ ('libpng', '1.6.12'), ('Pango', '1.36.7'), ('Perl', '5.20.0'), - (python, pythonversion), + (local_python, local_pythonversion), ('Qt', '4.8.6'), - ('SWIG', '3.0.2', '-%s-%s' % (python, pythonversion)), + ('SWIG', '3.0.2', '-%s-%s' % (local_python, local_pythonversion)), ('Tcl', '8.6.2'), ('zlib', '1.2.8'), ] @@ -65,7 +65,7 @@ sanity_check_paths = { 'dirs': ['include']} modextrapaths = { - 'PYTHONPATH': 'lib/graphviz/python', + 'PYTHONPATH': 'lib/graphviz/local_python', 'CLASSPATH': 'lib/graphviz/java/org/graphviz', 'LD_LIBRARY_PATH': 'lib/graphviz/java', 'TCLLIBPATH': 'lib/graphviz/tcl', diff --git a/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2015a-Python-2.7.10.eb b/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2015a-Python-2.7.10.eb index 842be79c..0e990467 100644 --- a/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2015a-Python-2.7.10.eb +++ b/ARCHIVE/g/Graphviz/Graphviz-2.38.0-intel-2015a-Python-2.7.10.eb @@ -15,11 +15,11 @@ toolchain = {'name': 'intel', 'version': '2015a'} source_urls = ['http://www.graphviz.org/pub/graphviz/stable/SOURCES/'] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) -gliblocal_suff = '-GLib-2.44.1' +local_gliblocal_suff = '-GLib-2.44.1' dependencies = [ ('cairo', '1.14.2'), @@ -27,13 +27,13 @@ dependencies = [ ('freetype', '2.6'), ('fontconfig', '2.11.94'), ('Ghostscript', '9.16'), - ('GTS', '0.7.6', gliblocal_suff), + ('GTS', '0.7.6', local_gliblocal_suff), ('Java', '1.7.0_80', '', True), ('libpng', '1.6.17'), ('Pango', '1.37.2'), ('Perl', '5.20.0'), - (python, local_pyver), - ('Qt', '4.8.6', gliblocal_suff), + (local_python, local_pyver), + ('Qt', '4.8.6', local_gliblocal_suff), ('SWIG', '3.0.7', versionsuffix), ('Tcl', '8.6.4'), ('zlib', '1.2.8'), @@ -67,7 +67,7 @@ sanity_check_paths = { 'dirs': ['include']} modextrapaths = { - 'PYTHONPATH': 'lib/graphviz/python', + 'PYTHONPATH': 'lib/graphviz/local_python', 'CLASSPATH': 'lib/graphviz/java/org/graphviz', 'LD_LIBRARY_PATH': 'lib/graphviz/java', 'TCLLIBPATH': 'lib/graphviz/tcl', diff --git a/ARCHIVE/g/gensim/gensim-0.13.2-foss-2016a-Python-2.7.11.eb b/ARCHIVE/g/gensim/gensim-0.13.2-foss-2016a-Python-2.7.11.eb index 3ceea46f..dffca2a7 100644 --- a/ARCHIVE/g/gensim/gensim-0.13.2-foss-2016a-Python-2.7.11.eb +++ b/ARCHIVE/g/gensim/gensim-0.13.2-foss-2016a-Python-2.7.11.eb @@ -38,7 +38,7 @@ exts_list = [ # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [], diff --git a/ARCHIVE/g/gnutls/gnutls-3.3.21-intel-2016a.eb b/ARCHIVE/g/gnutls/gnutls-3.3.21-intel-2016a.eb index fb9c87a1..3aca453f 100644 --- a/ARCHIVE/g/gnutls/gnutls-3.3.21-intel-2016a.eb +++ b/ARCHIVE/g/gnutls/gnutls-3.3.21-intel-2016a.eb @@ -16,12 +16,12 @@ toolchain = {'name': 'intel', 'version': '2016a'} source_urls = ['ftp://ftp.gnutls.org/gcrypt/gnutls/v%(version_major_minor)s'] sources = [SOURCE_TAR_XZ] -guilever = '1.8.8' -guileshortver = '.'.join(guilever.split('.')[:2]) +local_guilever = '1.8.8' +local_guileshortver = '.'.join(local_guilever.split('.')[:2]) dependencies = [ ('GMP', '6.1.0'), ('nettle', '3.1.1'), - ('guile', guilever), + ('guile', local_guilever), ('libtasn1', '4.7'), ('libidn', '1.32'), ('p11-kit', '0.23.2'), @@ -52,7 +52,7 @@ sanity_check_paths = { SHLIB_EXT]] + [ 'lib/guile/%s/guile-gnutls-v-2.so' % - guileshortver], + local_guileshortver], 'dirs': ['include/gnutls'], } diff --git a/ARCHIVE/g/gnutls/gnutls-3.4.11-foss-2016a.eb b/ARCHIVE/g/gnutls/gnutls-3.4.11-foss-2016a.eb index ff2c8129..9ca8a0d7 100644 --- a/ARCHIVE/g/gnutls/gnutls-3.4.11-foss-2016a.eb +++ b/ARCHIVE/g/gnutls/gnutls-3.4.11-foss-2016a.eb @@ -16,12 +16,12 @@ toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['ftp://ftp.gnutls.org/gcrypt/gnutls/v%(version_major_minor)s'] sources = [SOURCE_TAR_XZ] -guilever = '1.8.8' -guileshortver = '.'.join(guilever.split('.')[:2]) +local_guilever = '1.8.8' +local_guileshortver = '.'.join(local_guilever.split('.')[:2]) dependencies = [ ('GMP', '6.1.0'), ('nettle', '3.1.1'), - ('guile', guilever), + ('guile', local_guilever), ('libtasn1', '4.7'), ('libidn', '1.32'), ('p11-kit', '0.23.2'), @@ -52,7 +52,7 @@ sanity_check_paths = { SHLIB_EXT]] + [ 'lib/guile/%s/guile-gnutls-v-2.so' % - guileshortver], + local_guileshortver], 'dirs': ['include/gnutls'], } diff --git a/ARCHIVE/g/gtkglext/gtkglext-1.2.0-intel-2015b.eb b/ARCHIVE/g/gtkglext/gtkglext-1.2.0-intel-2015b.eb index 2fee3ef4..d2e7bbc3 100644 --- a/ARCHIVE/g/gtkglext/gtkglext-1.2.0-intel-2015b.eb +++ b/ARCHIVE/g/gtkglext/gtkglext-1.2.0-intel-2015b.eb @@ -13,11 +13,11 @@ sources = [SOURCE_TAR_GZ] patches = ['gtkglext-%(version)s_fix-gtk-local_compat.patch'] -pangover = '1.37.1' +local_pangover = '1.37.1' dependencies = [ ('GTK+', '2.24.28'), - ('Pango', pangover), - ('pangox-local_compat', '0.0.2', '-Pango-%s' % pangover), + ('Pango', local_pangover), + ('pangox-local_compat', '0.0.2', '-Pango-%s' % local_pangover), ] sanity_check_paths = { diff --git a/ARCHIVE/i/intelcuda/intelcuda-2016.10.eb b/ARCHIVE/i/intelcuda/intelcuda-2016.10.eb index 24d40eac..9cef011a 100644 --- a/ARCHIVE/i/intelcuda/intelcuda-2016.10.eb +++ b/ARCHIVE/i/intelcuda/intelcuda-2016.10.eb @@ -12,14 +12,14 @@ local_local_comp_name = 'iccifort' local_comp_ver = '2016.3.210' local_gccver = '5.4.0' local_local_binutilsver = '2.26' -gcclocal_suff = '-GCC-%s-%s' % (local_gccver, local_local_binutilsver) -local_comp = (local_local_comp_name, '%s%s' % (local_comp_ver, gcclocal_suff)) +local_gcclocal_suff = '-GCC-%s-%s' % (local_gccver, local_local_binutilsver) +local_comp = (local_local_comp_name, '%s%s' % (local_comp_ver, local_gcclocal_suff)) dependencies = [ local_comp, # part of iimpic ('CUDA', '8.0.44', '', local_comp), - ('icc', local_comp_ver, gcclocal_suff), - ('ifort', local_comp_ver, gcclocal_suff), + ('icc', local_comp_ver, local_gcclocal_suff), + ('ifort', local_comp_ver, local_gcclocal_suff), ('impi', '5.1.3.181', '', ('iccifortcuda', version)), ('imkl', '11.3.3.210', '', ('iimpic', version)), ] diff --git a/ARCHIVE/i/iomkl/iomkl-2015.03.eb b/ARCHIVE/i/iomkl/iomkl-2015.03.eb index 49a288a9..9cf98d83 100644 --- a/ARCHIVE/i/iomkl/iomkl-2015.03.eb +++ b/ARCHIVE/i/iomkl/iomkl-2015.03.eb @@ -9,12 +9,12 @@ description = """Intel Cluster Toolchain Compiler Edition provides Intel C/C++ a toolchain = SYSTEM local_local_compver = '2015.3.187' -gcclocal_suff = '-GNU-4.9.3-2.25' +local_gcclocal_suff = '-GNU-4.9.3-2.25' dependencies = [ - ('icc', local_local_compver, gcclocal_suff), - ('ifort', local_local_compver, gcclocal_suff), - ('OpenMPI', '1.8.8', '', ('iccifort', '%s%s' % (local_local_compver, gcclocal_suff))), + ('icc', local_local_compver, local_gcclocal_suff), + ('ifort', local_local_compver, local_gcclocal_suff), + ('OpenMPI', '1.8.8', '', ('iccifort', '%s%s' % (local_local_compver, local_gcclocal_suff))), ('imkl', '11.2.3.187', '', ('iompi', version)), ] diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-16Mar2018-intel-2017a.eb b/ARCHIVE/l/LAMMPS/LAMMPS-16Mar2018-intel-2017a.eb index 41ab4fe6..e2a4ca45 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-16Mar2018-intel-2017a.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-16Mar2018-intel-2017a.eb @@ -28,15 +28,15 @@ builddependencies = [ ('CMake', '3.5.2', '', True) ] -commands = "cd src && make yes-kokkos && " -commands += "make yes-user-phonon && make yes-misc && " -commands += "make lib-reax args='-m ifort' && make yes-reax && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +local_commands = "cd src && make yes-kokkos && " +local_commands += "make yes-user-phonon && make yes-misc && " +local_commands += "make lib-reax args='-m ifort' && make yes-reax && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-foss-2017a-CUDA.eb b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-foss-2017a-CUDA.eb index 57d1ae0e..8f706bf7 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-foss-2017a-CUDA.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-foss-2017a-CUDA.eb @@ -35,16 +35,16 @@ builddependencies = [ ('CMake', '3.5.2', '', True) ] -commands = "cd src && make lib-gpu args='-b' && make yes-gpu && " -commands += "make yes-kokkos && " -commands += "make yes-user-phonon && make yes-misc && " -commands += "make lib-reax args='-m mpi' && make yes-reax && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && " -commands += "make -j 16 kokkos_cuda_mpi && mv lmp_kokkos_cuda_mpi lammps" +local_commands = "cd src && make lib-gpu args='-b' && make yes-gpu && " +local_commands += "make yes-kokkos && " +local_commands += "make yes-user-phonon && make yes-misc && " +local_commands += "make lib-reax args='-m mpi' && make yes-reax && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && " +local_commands += "make -j 16 kokkos_cuda_mpi && mv lmp_kokkos_cuda_mpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC-test.eb b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC-test.eb index 40bca8db..52b11fae 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC-test.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC-test.eb @@ -37,15 +37,15 @@ builddependencies = [ maxparallel = 1 -commands = "cd src && " -commands += "make lib-reax args='-m ifort' && make yes-reax && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " -commands += "make yes-user-phonon && make yes-kokkos && " -commands += "make -j 16 intel_coprocessor && mv lmp_intel_coprocessor lammps" +local_commands = "cd src && " +local_commands += "make lib-reax args='-m ifort' && make yes-reax && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " +local_commands += "make yes-user-phonon && make yes-kokkos && " +local_commands += "make -j 16 intel_coprocessor && mv lmp_intel_coprocessor lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC.eb b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC.eb index 09f1a64f..cfa04bb6 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a-MIC.eb @@ -37,15 +37,15 @@ builddependencies = [ maxparallel = 1 -commands = "cd src && " -commands += "make lib-reax args='-m ifort' && make yes-reax && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " -commands += "make yes-user-phonon && make yes-kokkos && " -commands += "make -j 16 intel_coprocessor && mv lmp_intel_coprocessor lammps" +local_commands = "cd src && " +local_commands += "make lib-reax args='-m ifort' && make yes-reax && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " +local_commands += "make yes-user-phonon && make yes-kokkos && " +local_commands += "make -j 16 intel_coprocessor && mv lmp_intel_coprocessor lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a.eb b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a.eb index 3d3fd9de..c099f744 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-17Jan2018-intel-2017a.eb @@ -28,15 +28,15 @@ builddependencies = [ ('CMake', '3.5.2', '', True) ] -commands = "cd src && make yes-kokkos && " -commands += "make yes-user-phonon && make yes-misc && " -commands += "make lib-reax args='-m ifort' && make yes-reax && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +local_commands = "cd src && make yes-kokkos && " +local_commands += "make yes-user-phonon && make yes-misc && " +local_commands += "make lib-reax args='-m ifort' && make yes-reax && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-20181212-intel-2017c.eb b/ARCHIVE/l/LAMMPS/LAMMPS-20181212-intel-2017c.eb index 9e1c539f..bd436761 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-20181212-intel-2017c.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-20181212-intel-2017c.eb @@ -32,18 +32,18 @@ builddependencies = [ ('CMake', '3.13.1', '', True), ] -commands = "cd src && export LC_ALL='en_US.utf8' && " -commands += "make lib-reax args='-m ifort' && " -commands += "make lib-meam args='-m ifort' && " -commands += "make yes-reax && make yes-meam && " -commands += "make yes-kokkos && " -commands += "make yes-user-phonon && make yes-misc && make yes-user-meamc && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +local_commands = "cd src && export LC_ALL='en_US.utf8' && " +local_commands += "make lib-reax args='-m ifort' && " +local_commands += "make lib-meam args='-m ifort' && " +local_commands += "make yes-reax && make yes-meam && " +local_commands += "make yes-kokkos && " +local_commands += "make yes-user-phonon && make yes-misc && make yes-user-meamc && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-20190218-intel-2017c.eb b/ARCHIVE/l/LAMMPS/LAMMPS-20190218-intel-2017c.eb index 9617f1bb..5d9d28d0 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-20190218-intel-2017c.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-20190218-intel-2017c.eb @@ -31,16 +31,16 @@ builddependencies = [ # deprecated MEAM, REAX -commands = "cd src && " -commands += "make yes-kokkos && make yes-user-meamc && " -commands += "make yes-user-phonon && make yes-misc && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && " -commands += "make yes-spin && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +local_commands = "cd src && " +local_commands += "make yes-kokkos && make yes-user-meamc && " +local_commands += "make yes-user-phonon && make yes-misc && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && " +local_commands += "make yes-spin && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-foss-2017a.eb b/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-foss-2017a.eb index 35a9a3dc..f3398794 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-foss-2017a.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-foss-2017a.eb @@ -32,15 +32,15 @@ builddependencies = [ ('CMake', '3.5.2', '', True) ] -commands = "cd src && make yes-kokkos && " -commands += "make yes-user-phonon && make yes-misc && " -commands += "make lib-reax args='-m mpi' && make yes-reax && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && " -commands += "make -j 16 omp && mv lmp_omp lammps" +local_commands = "cd src && make yes-kokkos && " +local_commands += "make yes-user-phonon && make yes-misc && " +local_commands += "make lib-reax args='-m mpi' && make yes-reax && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && " +local_commands += "make -j 16 omp && mv lmp_omp lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-intel-2017a.eb b/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-intel-2017a.eb index f9831d6d..80cc29b1 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-intel-2017a.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-22Jun2018-intel-2017a.eb @@ -29,15 +29,15 @@ builddependencies = [ ('CMake', '3.5.2', '', True), ] -commands = "cd src && make yes-kokkos && " -commands += "make yes-user-phonon && make yes-misc && " -commands += "make lib-reax args='-m ifort' && make yes-reax && " -commands += "make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +local_commands = "cd src && make yes-kokkos && " +local_commands += "make yes-user-phonon && make yes-misc && " +local_commands += "make lib-reax args='-m ifort' && make yes-reax && " +local_commands += "make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-22Sep2017-intel-2017a.eb b/ARCHIVE/l/LAMMPS/LAMMPS-22Sep2017-intel-2017a.eb index f0c5b86b..745deb22 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-22Sep2017-intel-2017a.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-22Sep2017-intel-2017a.eb @@ -25,13 +25,13 @@ dependencies = [ ] -commands = "cd src && make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " -commands += "sed -i -e 's/-no-offload/-qno-offload/g' MAKE/OPTIONS/Makefile.intel_cpu_intelmpi && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +local_commands = "cd src && make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " +local_commands += "sed -i -e 's/-no-offload/-qno-offload/g' MAKE/OPTIONS/Makefile.intel_cpu_intelmpi && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-23Oct2017-intel-2017a.eb b/ARCHIVE/l/LAMMPS/LAMMPS-23Oct2017-intel-2017a.eb index 974cc289..64684e34 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-23Oct2017-intel-2017a.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-23Oct2017-intel-2017a.eb @@ -31,13 +31,13 @@ builddependencies = [ ] -#commands = "cd lib/reax && make -f Makefile.ifort && cd ../.. && " -commands = "cd src && make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " -commands += "make yes-kokkos && make yes-user-phonon && make lib-reax args='-m ifort' && make yes-reax && " -#commands += "sed -i -e 's/-no-offload/-qno-offload/g' MAKE/OPTIONS/Makefile.intel_cpu_intelmpi && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +#local_commands = "cd lib/reax && make -f Makefile.ifort && cd ../.. && " +local_commands = "cd src && make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " +local_commands += "make yes-kokkos && make yes-user-phonon && make lib-reax args='-m ifort' && make yes-reax && " +#local_commands += "sed -i -e 's/-no-offload/-qno-offload/g' MAKE/OPTIONS/Makefile.intel_cpu_intelmpi && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/LAMMPS/LAMMPS-24Jul2017-intel-2017a.eb b/ARCHIVE/l/LAMMPS/LAMMPS-24Jul2017-intel-2017a.eb index f609d0cd..0f95f1cf 100644 --- a/ARCHIVE/l/LAMMPS/LAMMPS-24Jul2017-intel-2017a.eb +++ b/ARCHIVE/l/LAMMPS/LAMMPS-24Jul2017-intel-2017a.eb @@ -25,13 +25,13 @@ dependencies = [ ] -commands = "cd src && make yes-kspace && make yes-manybody && make yes-molecule && " -commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " -commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " -commands += "sed -i -e 's/-no-offload/-qno-offload/g' MAKE/OPTIONS/Makefile.intel_cpu_intelmpi && " -commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" +local_commands = "cd src && make yes-kspace && make yes-manybody && make yes-molecule && " +local_commands += "make yes-qeq && make yes-rigid && make yes-user-misc && " +local_commands += "make yes-user-reaxc && make yes-user-omp && make yes-user-intel && " +local_commands += "sed -i -e 's/-no-offload/-qno-offload/g' MAKE/OPTIONS/Makefile.intel_cpu_intelmpi && " +local_commands += "make -j 16 intel_cpu_intelmpi && mv lmp_intel_cpu_intelmpi lammps" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['src/lammps'], 'bin'), diff --git a/ARCHIVE/l/libXt/libXt-1.1.4-intel-2015b-libX11-1.6.2.eb b/ARCHIVE/l/libXt/libXt-1.1.4-intel-2015b-libX11-1.6.2.eb index bcb60f73..c04419eb 100644 --- a/ARCHIVE/l/libXt/libXt-1.1.4-intel-2015b-libX11-1.6.2.eb +++ b/ARCHIVE/l/libXt/libXt-1.1.4-intel-2015b-libX11-1.6.2.eb @@ -13,12 +13,12 @@ toolchainopts = {'optarch': True} sources = [SOURCE_TAR_GZ] source_urls = [XORG_LIB_SOURCE] -libx11ver = '1.6.2' -versionsuffix = '-libX11-%s' % libx11ver +local_libx11ver = '1.6.2' +versionsuffix = '-libX11-%s' % local_libx11ver dependencies = [ ('libSM', '1.2.2'), ('libICE', '1.0.9'), - ('libX11', libx11ver, '-Python-2.7.9'), + ('libX11', local_libx11ver, '-Python-2.7.9'), ] builddependencies = [ diff --git a/ARCHIVE/l/libXt/libXt-1.1.5-intel-2017a-libX11-1.6.5.eb b/ARCHIVE/l/libXt/libXt-1.1.5-intel-2017a-libX11-1.6.5.eb index 76b9ed8c..78acee98 100644 --- a/ARCHIVE/l/libXt/libXt-1.1.5-intel-2017a-libX11-1.6.5.eb +++ b/ARCHIVE/l/libXt/libXt-1.1.5-intel-2017a-libX11-1.6.5.eb @@ -13,12 +13,12 @@ toolchainopts = {'optarch': True} sources = [SOURCE_TAR_GZ] source_urls = [XORG_LIB_SOURCE] -libx11ver = '1.6.5' -versionsuffix = '-libX11-%s' % libx11ver +local_libx11ver = '1.6.5' +versionsuffix = '-libX11-%s' % local_libx11ver dependencies = [ ('libSM', '1.2.2', '', True), ('libICE', '1.0.9', '', True), - ('libX11', libx11ver), + ('libX11', local_libx11ver), ] builddependencies = [ diff --git a/ARCHIVE/l/libpng/libpng-1.6.21-intel-2017.00.eb b/ARCHIVE/l/libpng/libpng-1.6.21-intel-2017.00.eb index 3dcad64a..838d9f9b 100644 --- a/ARCHIVE/l/libpng/libpng-1.6.21-intel-2017.00.eb +++ b/ARCHIVE/l/libpng/libpng-1.6.21-intel-2017.00.eb @@ -16,7 +16,7 @@ dependencies = [('zlib', '1.2.8')] configopts = "--with-pic" -majminver = ''.join(version.split('.')[:2]) +local_majminver = ''.join(version.split('.')[:2]) sanity_check_paths = { 'files': [ 'include/pngconf.h', @@ -26,14 +26,14 @@ sanity_check_paths = { 'lib/libpng.%s' % SHLIB_EXT, 'lib/libpng%s.a' % - majminver, + local_majminver, 'lib/libpng%s.%s' % - (majminver, + (local_majminver, SHLIB_EXT)], 'dirs': [ 'bin', 'include/libpng%s' % - majminver, + local_majminver, 'share/man'], } diff --git a/ARCHIVE/l/libxc/libxc-4.3.4-intel-2017c.eb b/ARCHIVE/l/libxc/libxc-4.3.4-intel-2017c.eb index a8033454..0c62bcfc 100644 --- a/ARCHIVE/l/libxc/libxc-4.3.4-intel-2017c.eb +++ b/ARCHIVE/l/libxc/libxc-4.3.4-intel-2017c.eb @@ -26,12 +26,12 @@ separate_build_dir = True # also requires patch file to rename file in CMakeLists.txt and src/Makefile.in preconfigopts = "mv ../libxc-%(version)s/src/libxc_master.F03 ../libxc-%(version)s/src/libxc_master_F03.F90 && " -common_configopts = "-DENABLE_FORTRAN=ON -DENABLE_FORTRAN03=ON -DENABLE_XHOST=OFF" +local_common_configopts = "-DENABLE_FORTRAN=ON -DENABLE_FORTRAN03=ON -DENABLE_XHOST=OFF" # perform iterative build to get both static and shared libraries configopts = [ - common_configopts + ' -DBUILD_SHARED_LIBS=OFF', - common_configopts + ' -DBUILD_SHARED_LIBS=ON', + local_common_configopts + ' -DBUILD_SHARED_LIBS=OFF', + local_common_configopts + ' -DBUILD_SHARED_LIBS=ON', ] parallel = 1 diff --git a/ARCHIVE/l/libxcb/libxcb-1.10-foss-2014b-Python-2.7.8.eb b/ARCHIVE/l/libxcb/libxcb-1.10-foss-2014b-Python-2.7.8.eb index adb696cb..062dd358 100644 --- a/ARCHIVE/l/libxcb/libxcb-1.10-foss-2014b-Python-2.7.8.eb +++ b/ARCHIVE/l/libxcb/libxcb-1.10-foss-2014b-Python-2.7.8.eb @@ -12,12 +12,12 @@ toolchain = {'name': 'foss', 'version': '2014b'} source_urls = ['http://xcb.freedesktop.org/dist/'] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.8' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('xcb-proto', '1.10', versionsuffix), ('libXau', '1.0.8'), ('libpthread-stubs', '0.3'), diff --git a/ARCHIVE/l/libxcb/libxcb-1.11-Python-2.7.9.eb b/ARCHIVE/l/libxcb/libxcb-1.11-Python-2.7.9.eb index b4fb5a58..ffd6c0cf 100644 --- a/ARCHIVE/l/libxcb/libxcb-1.11-Python-2.7.9.eb +++ b/ARCHIVE/l/libxcb/libxcb-1.11-Python-2.7.9.eb @@ -12,12 +12,12 @@ toolchain = SYSTEM source_urls = ['http://xcb.freedesktop.org/dist/'] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('xcb-proto', '1.11', versionsuffix), ('libXau', '1.0.8'), ('libpthread-stubs', '0.3'), diff --git a/ARCHIVE/l/libxcb/libxcb-1.11-intel-2015b-Python-2.7.9.eb b/ARCHIVE/l/libxcb/libxcb-1.11-intel-2015b-Python-2.7.9.eb index a693650c..e3d56b2c 100644 --- a/ARCHIVE/l/libxcb/libxcb-1.11-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/l/libxcb/libxcb-1.11-intel-2015b-Python-2.7.9.eb @@ -12,12 +12,12 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = ['http://xcb.freedesktop.org/dist/'] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('xcb-proto', '1.11', versionsuffix), ('libXau', '1.0.8'), ('libpthread-stubs', '0.3'), diff --git a/ARCHIVE/l/libxml2/libxml2-2.8.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb b/ARCHIVE/l/libxml2/libxml2-2.8.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb index 14214401..ec447df5 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.8.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.8.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.7'), - ('Python', pythonver), + ('Python', local_pythonver), ] sanity_check_paths = { diff --git a/ARCHIVE/l/libxml2/libxml2-2.8.0-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/l/libxml2/libxml2-2.8.0-goolf-1.4.10-Python-2.7.3.eb index fb81d7d3..1650329a 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.8.0-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.8.0-goolf-1.4.10-Python-2.7.3.eb @@ -15,13 +15,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.7'), - ('Python', pythonver), + ('Python', local_pythonver), ] sanity_check_paths = { diff --git a/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.0.6-Python-2.7.3.eb b/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.0.6-Python-2.7.3.eb index 0a16c5d5..b96a49a8 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.0.6-Python-2.7.3.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.0.6-Python-2.7.3.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.7'), - ('Python', pythonver), + ('Python', local_pythonver), ] sanity_check_paths = { diff --git a/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.1.13-Python-2.7.3.eb b/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.1.13-Python-2.7.3.eb index 08547755..c39a5300 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.1.13-Python-2.7.3.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-4.1.13-Python-2.7.3.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.7'), - ('Python', pythonver), + ('Python', local_pythonver), ] sanity_check_paths = { diff --git a/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-5.3.0-Python-2.7.3.eb index 7c031ef0..39488cba 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.8.0-ictce-5.3.0-Python-2.7.3.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.7'), - ('Python', pythonver), + ('Python', local_pythonver), ] sanity_check_paths = { diff --git a/ARCHIVE/l/libxml2/libxml2-2.8.0-intel-2015a-Python-2.7.3.eb b/ARCHIVE/l/libxml2/libxml2-2.8.0-intel-2015a-Python-2.7.3.eb index f73ef8d4..01236059 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.8.0-intel-2015a-Python-2.7.3.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.8.0-intel-2015a-Python-2.7.3.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.3' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.3' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.8'), - ('Python', pythonver), + ('Python', local_pythonver), ] sanity_check_paths = { diff --git a/ARCHIVE/l/libxml2/libxml2-2.9.1-ictce-5.5.0-Python-2.7.6.eb b/ARCHIVE/l/libxml2/libxml2-2.9.1-ictce-5.5.0-Python-2.7.6.eb index 6054027d..3c596c88 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.9.1-ictce-5.5.0-Python-2.7.6.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.9.1-ictce-5.5.0-Python-2.7.6.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.6' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.6' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.7'), - ('Python', pythonver), + ('Python', local_pythonver), ] sanity_check_paths = { diff --git a/ARCHIVE/l/libxml2/libxml2-2.9.2-foss-2015g-Python-2.7.9.eb b/ARCHIVE/l/libxml2/libxml2-2.9.2-foss-2015g-Python-2.7.9.eb index 3f53d503..896cdf9c 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.9.2-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.9.2-foss-2015g-Python-2.7.9.eb @@ -19,12 +19,12 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --without-python' -pythonver = '2.7.9' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.9' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [('zlib', '1.2.8'), - ('Python', pythonver), + ('Python', local_pythonver), ] moduleclass = 'lib' diff --git a/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.10.eb b/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.10.eb index 37724f23..68b514bb 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.10.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.10.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.10' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.10' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.8'), - ('Python', pythonver), + ('Python', local_pythonver), ] moduleclass = 'lib' diff --git a/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.9.eb b/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.9.eb index 307b1793..5bbec6a6 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.9.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.9.2-intel-2015a-Python-2.7.9.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.9' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.9' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.8'), - ('Python', pythonver), + ('Python', local_pythonver), ] moduleclass = 'lib' diff --git a/ARCHIVE/l/libxml2/libxml2-2.9.3-foss-2015a-Python-2.7.11.eb b/ARCHIVE/l/libxml2/libxml2-2.9.3-foss-2015a-Python-2.7.11.eb index 6cafc86e..143269e8 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.9.3-foss-2015a-Python-2.7.11.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.9.3-foss-2015a-Python-2.7.11.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.11' -pythonshortver = '.'.join(pythonver.split('.')[:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.11' +local_pythonshortver = '.'.join(local_pythonver.split('.')[:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.8'), - ('Python', pythonver), + ('Python', local_pythonver), ] moduleclass = 'lib' diff --git a/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.10.eb b/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.10.eb index 34777c9c..284ddcfd 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.10.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.10.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.10' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.10' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.8'), - ('Python', pythonver), + ('Python', local_pythonver), ] moduleclass = 'lib' diff --git a/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.11.eb b/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.11.eb index b2807106..32e400d2 100644 --- a/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.11.eb +++ b/ARCHIVE/l/libxml2/libxml2-2.9.3-intel-2015b-Python-2.7.11.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_GZ] configopts = 'CC="$CC" CXX="$CXX" --with-pic --with-zlib=$EBROOTZLIB' -pythonver = '2.7.11' -pythonshortver = '.'.join(pythonver.split('.')[:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.11' +local_pythonshortver = '.'.join(local_pythonver.split('.')[:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('zlib', '1.2.8'), - ('Python', pythonver), + ('Python', local_pythonver), ] moduleclass = 'lib' diff --git a/ARCHIVE/l/lxml/lxml-3.4.4-intel-2015b-Python-2.7.9.eb b/ARCHIVE/l/lxml/lxml-3.4.4-intel-2015b-Python-2.7.9.eb index 6c73b4ac..f73f6568 100644 --- a/ARCHIVE/l/lxml/lxml-3.4.4-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/l/lxml/lxml-3.4.4-intel-2015b-Python-2.7.9.eb @@ -11,24 +11,24 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = ['http://lxml.de/files/'] sources = [SOURCE_TGZ] -python = 'Python' -pythonversion = '2.7.9' -local_pyshortver = '.'.join(pythonversion.split('.')[:2]) +local_python = 'Python' +local_pythonversion = '2.7.9' +local_pyshortver = '.'.join(local_pythonversion.split('.')[:2]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('libxml2', '2.9.2'), ('libxslt', '1.1.28'), ] -pylibdir = "lib/python%s/site-packages/%%(name)s" % local_pyshortver +local_pylibdir = "lib/local_python%s/site-packages/%%(name)s" % local_pyshortver sanity_check_paths = { 'files': [], 'dirs': [ ('%s-%%(version)s-py%s.egg' % - (pylibdir, local_pyshortver), '%s-%%(version)s-py%s-linux-x86_64.egg' % - (pylibdir, local_pyshortver))], } + (local_pylibdir, local_pyshortver), '%s-%%(version)s-py%s-linux-x86_64.egg' % + (local_pylibdir, local_pyshortver))], } moduleclass = 'lib' diff --git a/ARCHIVE/l/lxml/lxml-3.8.0-Python-2.7.13-base.eb b/ARCHIVE/l/lxml/lxml-3.8.0-Python-2.7.13-base.eb index 861690cf..bad2848b 100644 --- a/ARCHIVE/l/lxml/lxml-3.8.0-Python-2.7.13-base.eb +++ b/ARCHIVE/l/lxml/lxml-3.8.0-Python-2.7.13-base.eb @@ -11,24 +11,24 @@ toolchain = SYSTEM source_urls = ['http://lxml.de/files/'] sources = [SOURCE_TGZ] -python = 'Python' -pythonversion = '2.7.13' -local_pyshortver = '.'.join(pythonversion.split('.')[:2]) +local_python = 'Python' +local_pythonversion = '2.7.13' +local_pyshortver = '.'.join(local_pythonversion.split('.')[:2]) -versionsuffix = "-%s-%s-base" % (python, pythonversion) +versionsuffix = "-%s-%s-base" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion, '-base'), + (local_python, local_pythonversion, '-base'), ('libxml2', '2.9.4'), ('libxslt', '1.1.29'), ] -pylibdir = "lib/python%s/site-packages/%%(name)s" % local_pyshortver +local_pylibdir = "lib/local_python%s/site-packages/%%(name)s" % local_pyshortver sanity_check_paths = { 'files': [], 'dirs': [ ('%s-%%(version)s-py%s.egg' % - (pylibdir, local_pyshortver), '%s-%%(version)s-py%s-linux-x86_64.egg' % - (pylibdir, local_pyshortver))], } + (local_pylibdir, local_pyshortver), '%s-%%(version)s-py%s-linux-x86_64.egg' % + (local_pylibdir, local_pyshortver))], } moduleclass = 'lib' diff --git a/ARCHIVE/m/Mercurial/Mercurial-2.3.2-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/m/Mercurial/Mercurial-2.3.2-goolf-1.4.10-Python-2.7.3.eb index 8175c4c1..c5842d15 100644 --- a/ARCHIVE/m/Mercurial/Mercurial-2.3.2-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/m/Mercurial/Mercurial-2.3.2-goolf-1.4.10-Python-2.7.3.eb @@ -12,17 +12,17 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://mercurial.selenic.com/release/'] -python = "Python" -pythonversion = '2.7.3' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.3' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': ['bin/hg'], - 'dirs': ['lib/python%s/site-packages/mercurial' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/mercurial' % local_pythonshortversion], } moduleclass = 'tools' diff --git a/ARCHIVE/m/Mercurial/Mercurial-2.3.2-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/m/Mercurial/Mercurial-2.3.2-ictce-5.3.0-Python-2.7.3.eb index f2baa1d1..751ed899 100644 --- a/ARCHIVE/m/Mercurial/Mercurial-2.3.2-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/m/Mercurial/Mercurial-2.3.2-ictce-5.3.0-Python-2.7.3.eb @@ -13,17 +13,17 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = ['http://mercurial.selenic.com/release/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.3' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.3' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': ['bin/hg'], - 'dirs': ['lib/python%s/site-packages/mercurial' % pythonshortversion] + 'dirs': ['lib/local_python%s/site-packages/mercurial' % local_pythonshortversion] } moduleclass = 'tools' diff --git a/ARCHIVE/m/Mercurial/Mercurial-2.5.2-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/m/Mercurial/Mercurial-2.5.2-goolf-1.4.10-Python-2.7.3.eb index 43c0bcea..46e9039d 100644 --- a/ARCHIVE/m/Mercurial/Mercurial-2.5.2-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/m/Mercurial/Mercurial-2.5.2-goolf-1.4.10-Python-2.7.3.eb @@ -12,17 +12,17 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['http://mercurial.selenic.com/release/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.3' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.3' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': ['bin/hg'], - 'dirs': ['lib/python%s/site-packages/mercurial' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/mercurial' % local_pythonshortversion], } moduleclass = 'tools' diff --git a/ARCHIVE/m/Mercurial/Mercurial-2.5.2-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/m/Mercurial/Mercurial-2.5.2-ictce-5.3.0-Python-2.7.3.eb index 47ecebdf..74776738 100644 --- a/ARCHIVE/m/Mercurial/Mercurial-2.5.2-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/m/Mercurial/Mercurial-2.5.2-ictce-5.3.0-Python-2.7.3.eb @@ -12,17 +12,17 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = ['http://mercurial.selenic.com/release/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.3' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.3' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': ['bin/hg'], - 'dirs': ['lib/python%s/site-packages/mercurial' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/mercurial' % local_pythonshortversion], } moduleclass = 'tools' diff --git a/ARCHIVE/m/Mercurial/Mercurial-3.2.4-foss-2015a-Python-2.7.9.eb b/ARCHIVE/m/Mercurial/Mercurial-3.2.4-foss-2015a-Python-2.7.9.eb index 047324c7..086baeec 100644 --- a/ARCHIVE/m/Mercurial/Mercurial-3.2.4-foss-2015a-Python-2.7.9.eb +++ b/ARCHIVE/m/Mercurial/Mercurial-3.2.4-foss-2015a-Python-2.7.9.eb @@ -13,17 +13,17 @@ toolchain = {'name': 'foss', 'version': '2015a'} source_urls = ['http://mercurial.selenic.com/release/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': ['bin/hg'], - 'dirs': ['lib/python%s/site-packages/mercurial' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/mercurial' % local_pythonshortversion], } moduleclass = 'tools' diff --git a/ARCHIVE/m/Mercurial/Mercurial-3.5-intel-2015b-Python-2.7.9.eb b/ARCHIVE/m/Mercurial/Mercurial-3.5-intel-2015b-Python-2.7.9.eb index 4e2aac77..213e8f26 100644 --- a/ARCHIVE/m/Mercurial/Mercurial-3.5-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/m/Mercurial/Mercurial-3.5-intel-2015b-Python-2.7.9.eb @@ -13,17 +13,17 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = ['http://mercurial.selenic.com/release/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': ['bin/hg'], - 'dirs': ['lib/python%s/site-packages/mercurial' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/mercurial' % local_pythonshortversion], } moduleclass = 'tools' diff --git a/ARCHIVE/m/Mercurial/Mercurial-3.7.3-foss-2015g-Python-2.7.9.eb b/ARCHIVE/m/Mercurial/Mercurial-3.7.3-foss-2015g-Python-2.7.9.eb index 691cf837..5db62e09 100644 --- a/ARCHIVE/m/Mercurial/Mercurial-3.7.3-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/m/Mercurial/Mercurial-3.7.3-foss-2015g-Python-2.7.9.eb @@ -13,17 +13,17 @@ toolchain = {'name': 'foss', 'version': '2015g'} source_urls = ['http://mercurial.selenic.com/release/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': ['bin/hg'], - 'dirs': ['lib/python%s/site-packages/mercurial' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/mercurial' % local_pythonshortversion], } moduleclass = 'tools' diff --git a/ARCHIVE/m/Mesa/Mesa-10.4.5-intel-2015a-Python-2.7.9.eb b/ARCHIVE/m/Mesa/Mesa-10.4.5-intel-2015a-Python-2.7.9.eb index bb09f864..ff377a62 100644 --- a/ARCHIVE/m/Mesa/Mesa-10.4.5-intel-2015a-Python-2.7.9.eb +++ b/ARCHIVE/m/Mesa/Mesa-10.4.5-intel-2015a-Python-2.7.9.eb @@ -18,9 +18,9 @@ source_urls = [ patches = ['Mesa-%(version)s_sse4_1.patch'] -pythonver = '2.7.9' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.9' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) builddependencies = [ ('flex', '2.5.39'), @@ -37,7 +37,7 @@ builddependencies = [ ] dependencies = [ - ('Python', pythonver), + ('Python', local_pythonver), ('libxml2', '2.9.2', versionsuffix), ('libdrm', '2.4.59'), ('libX11', '1.6.3', versionsuffix), diff --git a/ARCHIVE/m/Mesa/Mesa-10.5.5-intel-2015a-Python-2.7.10.eb b/ARCHIVE/m/Mesa/Mesa-10.5.5-intel-2015a-Python-2.7.10.eb index 592c4a11..5bb80ffe 100644 --- a/ARCHIVE/m/Mesa/Mesa-10.5.5-intel-2015a-Python-2.7.10.eb +++ b/ARCHIVE/m/Mesa/Mesa-10.5.5-intel-2015a-Python-2.7.10.eb @@ -16,9 +16,9 @@ source_urls = [ 'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x/%(version)s', ] -pythonver = '2.7.10' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.10' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) builddependencies = [ ('flex', '2.5.39', '', ('GCC', '4.9.2')), @@ -34,7 +34,7 @@ builddependencies = [ ] dependencies = [ - ('Python', pythonver), + ('Python', local_pythonver), ('libxml2', '2.9.2'), ('libdrm', '2.4.59'), ('libX11', '1.6.3', versionsuffix), diff --git a/ARCHIVE/m/Mesa/Mesa-11.0.2-intel-2015b-Python-2.7.10.eb b/ARCHIVE/m/Mesa/Mesa-11.0.2-intel-2015b-Python-2.7.10.eb index 55bb207b..27b532cb 100644 --- a/ARCHIVE/m/Mesa/Mesa-11.0.2-intel-2015b-Python-2.7.10.eb +++ b/ARCHIVE/m/Mesa/Mesa-11.0.2-intel-2015b-Python-2.7.10.eb @@ -16,9 +16,9 @@ source_urls = [ 'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x/%(version)s', ] -pythonver = '2.7.10' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.10' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) builddependencies = [ ('flex', '2.5.39'), @@ -33,7 +33,7 @@ builddependencies = [ ] dependencies = [ - ('Python', pythonver), + ('Python', local_pythonver), ('libxml2', '2.9.2'), ('libdrm', '2.4.64'), ('libX11', '1.6.3', versionsuffix), diff --git a/ARCHIVE/m/Mesa/Mesa-11.0.8-foss-2015g-Python-2.7.9.eb b/ARCHIVE/m/Mesa/Mesa-11.0.8-foss-2015g-Python-2.7.9.eb index 922ec73e..ffe4a98f 100644 --- a/ARCHIVE/m/Mesa/Mesa-11.0.8-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/m/Mesa/Mesa-11.0.8-foss-2015g-Python-2.7.9.eb @@ -16,9 +16,9 @@ source_urls = [ 'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x/%(version)s', ] -pythonver = '2.7.9' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.9' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) builddependencies = [ ('flex', '2.5.39'), @@ -33,7 +33,7 @@ builddependencies = [ ] dependencies = [ - ('Python', pythonver), + ('Python', local_pythonver), ('libxml2', '2.9.2', versionsuffix), ('libdrm', '2.4.27'), ('libX11', '1.6.2', versionsuffix), diff --git a/ARCHIVE/m/Mesa/Mesa-11.0.8-intel-2015b-Python-2.7.11.eb b/ARCHIVE/m/Mesa/Mesa-11.0.8-intel-2015b-Python-2.7.11.eb index a22cf02d..1fb8acea 100644 --- a/ARCHIVE/m/Mesa/Mesa-11.0.8-intel-2015b-Python-2.7.11.eb +++ b/ARCHIVE/m/Mesa/Mesa-11.0.8-intel-2015b-Python-2.7.11.eb @@ -16,9 +16,9 @@ source_urls = [ 'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x/%(version)s', ] -pythonver = '2.7.11' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.11' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) builddependencies = [ ('flex', '2.5.39'), @@ -33,7 +33,7 @@ builddependencies = [ ] dependencies = [ - ('Python', pythonver), + ('Python', local_pythonver), ('libxml2', '2.9.3', versionsuffix), ('libdrm', '2.4.66'), ('libX11', '1.6.3', versionsuffix), diff --git a/ARCHIVE/m/Mesa/Mesa-7.11.2-foss-2015g-Python-2.7.9.eb b/ARCHIVE/m/Mesa/Mesa-7.11.2-foss-2015g-Python-2.7.9.eb index 2aa0ea66..f3cc1766 100644 --- a/ARCHIVE/m/Mesa/Mesa-7.11.2-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/m/Mesa/Mesa-7.11.2-foss-2015g-Python-2.7.9.eb @@ -17,15 +17,15 @@ source_urls = [ 'ftp://ftp.freedesktop.org/pub/mesa/older-versions/%(version_major)s.x/%(version)s', ] -pythonver = '2.7.9' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % ('Python', pythonver) +local_pythonver = '2.7.9' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % ('Python', local_pythonver) dependencies = [ ('flex', '2.5.39'), ('Bison', '2.7'), ('makedepend', '1.0.4'), - ('Python', pythonver), + ('Python', local_pythonver), #('libxml2', '2.9.2', versionsuffix), ('libxml2', '2.9.2'), ('glproto', '1.4.16'), diff --git a/ARCHIVE/m/matplotlib/matplotlib-1.4.3-intel-2015b-Python-2.7.9.eb b/ARCHIVE/m/matplotlib/matplotlib-1.4.3-intel-2015b-Python-2.7.9.eb index a620d362..9421edfa 100644 --- a/ARCHIVE/m/matplotlib/matplotlib-1.4.3-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/m/matplotlib/matplotlib-1.4.3-intel-2015b-Python-2.7.9.eb @@ -4,8 +4,8 @@ name = 'matplotlib' version = '1.4.3' homepage = 'http://matplotlib.org' -description = """matplotlib is a python 2D plotting library which produces publication quality figures in a variety of - hardcopy formats and interactive environments across platforms. matplotlib can be used in python scripts, the python +description = """matplotlib is a local_python 2D plotting library which produces publication quality figures in a variety of + hardcopy formats and interactive environments across platforms. matplotlib can be used in local_python scripts, the local_python and ipython shell, web application servers, and six graphical user interface toolkits.""" toolchain = {'name': 'intel', 'version': '2015b'} @@ -15,23 +15,23 @@ sources = [SOURCELOWER_TAR_GZ] patches = [('matplotlib-%(version)s_Qhull-intel-fix.patch')] -python = "Python" -pythonversion = '2.7.9' -local_pyshortver = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pyshortver = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('freetype', '2.5.5'), ('libpng', '1.6.16'), ] -pyprefix = 'lib/python%s/site-packages' % local_pyshortver -eggname = 'matplotlib-%%(version)s-py%s-linux-x86_64.egg' % local_pyshortver +local_pyprefix = 'lib/local_python%s/site-packages' % local_pyshortver +local_eggname = 'matplotlib-%%(version)s-py%s-linux-x86_64.egg' % local_pyshortver sanity_check_paths = { 'files': [], - 'dirs': [('%s/%%(name)s' % pyprefix, '%s/%s' % (pyprefix, eggname))], + 'dirs': [('%s/%%(name)s' % local_pyprefix, '%s/%s' % (local_pyprefix, local_eggname))], } moduleclass = 'vis' diff --git a/ARCHIVE/m/matplotlib/matplotlib-1.5.1-Python-2.7.13-freetype-2.6.3.eb b/ARCHIVE/m/matplotlib/matplotlib-1.5.1-Python-2.7.13-freetype-2.6.3.eb index bbf9ac30..a38a12d3 100644 --- a/ARCHIVE/m/matplotlib/matplotlib-1.5.1-Python-2.7.13-freetype-2.6.3.eb +++ b/ARCHIVE/m/matplotlib/matplotlib-1.5.1-Python-2.7.13-freetype-2.6.3.eb @@ -13,12 +13,12 @@ toolchain = SYSTEM # this is a bundle of Python packages exts_defaultclass = 'PythonPackage' -freetype_ver = '2.6.3' -versionsuffix = '-Python-%%(local_pyver)s-freetype-%s' % freetype_ver +local_freetype_ver = '2.6.3' +versionsuffix = '-Python-%%(local_pyver)s-freetype-%s' % local_freetype_ver dependencies = [ ('Python', '2.7.13'), - ('freetype', freetype_ver), + ('freetype', local_freetype_ver), ('libpng', '1.6.29'), ] @@ -36,7 +36,7 @@ exts_list = [ # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [], diff --git a/ARCHIVE/m/matplotlib/matplotlib-2.0.2-Python-2.7.13-base.eb b/ARCHIVE/m/matplotlib/matplotlib-2.0.2-Python-2.7.13-base.eb index 0b1a4a46..b72021db 100644 --- a/ARCHIVE/m/matplotlib/matplotlib-2.0.2-Python-2.7.13-base.eb +++ b/ARCHIVE/m/matplotlib/matplotlib-2.0.2-Python-2.7.13-base.eb @@ -4,34 +4,34 @@ name = 'matplotlib' version = '2.0.2' homepage = 'http://matplotlib.org' -description = """matplotlib is a python 2D plotting library which produces publication quality figures in a variety of - hardcopy formats and interactive environments across platforms. matplotlib can be used in python scripts, the python +description = """matplotlib is a local_python 2D plotting library which produces publication quality figures in a variety of + hardcopy formats and interactive environments across platforms. matplotlib can be used in local_python scripts, the local_python and ipython shell, web application servers, and six graphical user interface toolkits.""" toolchain = SYSTEM source_urls = [ - 'https://pypi.python.org/packages/f5/f0/9da3ef24ea7eb0ccd12430a261b66eca36b924aeef06e17147f9f9d7d310/'] + 'https://pypi.local_python.org/packages/f5/f0/9da3ef24ea7eb0ccd12430a261b66eca36b924aeef06e17147f9f9d7d310/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.13' -local_pyshortver = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.13' +local_pyshortver = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s-base" % (python, pythonversion) +versionsuffix = "-%s-%s-base" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion, '-base'), + (local_python, local_pythonversion, '-base'), ('freetype', '2.8'), ('libpng', '1.6.29'), ('numpy', '1.13.0', versionsuffix), ] -pyprefix = 'lib/python%s/site-packages' % local_pyshortver -eggname = 'matplotlib-%%(version)s-py%s-linux-x86_64.egg' % local_pyshortver +local_pyprefix = 'lib/local_python%s/site-packages' % local_pyshortver +local_eggname = 'matplotlib-%%(version)s-py%s-linux-x86_64.egg' % local_pyshortver sanity_check_paths = { 'files': [], - 'dirs': [('%s/%%(name)s' % pyprefix, '%s/%s' % (pyprefix, eggname))], + 'dirs': [('%s/%%(name)s' % local_pyprefix, '%s/%s' % (local_pyprefix, local_eggname))], } moduleclass = 'vis' diff --git a/ARCHIVE/m/motif/motif-2.3.4-foss-2015g-libX11-1.6.2.eb b/ARCHIVE/m/motif/motif-2.3.4-foss-2015g-libX11-1.6.2.eb index f10de0fa..e59de892 100644 --- a/ARCHIVE/m/motif/motif-2.3.4-foss-2015g-libX11-1.6.2.eb +++ b/ARCHIVE/m/motif/motif-2.3.4-foss-2015g-libX11-1.6.2.eb @@ -15,12 +15,12 @@ toolchainopts = {'lowopt': True} sources = ['%(name)s-%(version)s-src.tgz'] source_urls = [SOURCEFORGE_SOURCE] -libx11ver = '1.6.2' -versionsuffix = '-libX11-%s' % libx11ver +local_libx11ver = '1.6.2' +versionsuffix = '-libX11-%s' % local_libx11ver dependencies = [ ('libXt', '1.1.4', versionsuffix), ('libXau', '1.0.8'), - ('libX11', libx11ver, '-Python-2.7.9'), + ('libX11', local_libx11ver, '-Python-2.7.9'), ('libXext', '1.3.3'), ('libXdmcp', '1.1.2'), ('libpng', '1.6.12'), diff --git a/ARCHIVE/m/motif/motif-2.3.4-intel-2015b-libX11-1.6.2.eb b/ARCHIVE/m/motif/motif-2.3.4-intel-2015b-libX11-1.6.2.eb index 9bb01179..303ce449 100644 --- a/ARCHIVE/m/motif/motif-2.3.4-intel-2015b-libX11-1.6.2.eb +++ b/ARCHIVE/m/motif/motif-2.3.4-intel-2015b-libX11-1.6.2.eb @@ -15,12 +15,12 @@ toolchainopts = {'lowopt': True} sources = ['%(name)s-%(version)s-src.tgz'] source_urls = [SOURCEFORGE_SOURCE] -libx11ver = '1.6.2' -versionsuffix = '-libX11-%s' % libx11ver +local_libx11ver = '1.6.2' +versionsuffix = '-libX11-%s' % local_libx11ver dependencies = [ ('libXt', '1.1.4', versionsuffix), ('libXau', '1.0.8'), - ('libX11', libx11ver, '-Python-2.7.9'), + ('libX11', local_libx11ver, '-Python-2.7.9'), ('libXext', '1.3.3'), ('libXdmcp', '1.1.2'), ('libpng', '1.6.12'), diff --git a/ARCHIVE/m/motif/motif-2.3.4-intel-2017a.eb b/ARCHIVE/m/motif/motif-2.3.4-intel-2017a.eb index 8356fe75..0762feb3 100644 --- a/ARCHIVE/m/motif/motif-2.3.4-intel-2017a.eb +++ b/ARCHIVE/m/motif/motif-2.3.4-intel-2017a.eb @@ -15,12 +15,12 @@ toolchainopts = {'lowopt': True} sources = ['%(name)s-%(version)s-src.tgz'] source_urls = [SOURCEFORGE_SOURCE] -libx11ver = '1.6.5' -versionsuffix = '-libX11-%s' % libx11ver +local_libx11ver = '1.6.5' +versionsuffix = '-libX11-%s' % local_libx11ver dependencies = [ # ('libXt', '1.1.5', versionsuffix), # ('libXau', '1.0.8', '', True), - # ('libX11', libx11ver), + # ('libX11', local_libx11ver), # ('libXext', '1.3.3', '', True), # ('libXdmcp', '1.1.2', '', True), ('libpng', '1.6.29', '', True), diff --git a/ARCHIVE/m/mutil/mutil-1.822.3-intel-2016a.eb b/ARCHIVE/m/mutil/mutil-1.822.3-intel-2016a.eb index 8f689fbc..db848856 100644 --- a/ARCHIVE/m/mutil/mutil-1.822.3-intel-2016a.eb +++ b/ARCHIVE/m/mutil/mutil-1.822.3-intel-2016a.eb @@ -1,7 +1,7 @@ name = 'mutil' -coreutils_maj = '8' -coreutils_min = '22' -version = '1.%s%s.3' % (coreutils_maj, coreutils_min) +local_coreutils_maj = '8' +local_coreutils_min = '22' +version = '1.%s%s.3' % (local_coreutils_maj, local_coreutils_min) homepage = 'http://people.nas.nasa.gov/~kolano/projects/mutil.html' description = """Mutil is a set of standard utilities that have been parallelized to maximize performance on @@ -12,7 +12,7 @@ GNU coreutils, which have achieved 10/30x rates on one/many nodes. toolchain = {'name': 'intel', 'version': '2016a'} sources = [ - "coreutils-%s.%s.tar.xz" % (coreutils_maj, coreutils_min), # must be first + "coreutils-%s.%s.tar.xz" % (local_coreutils_maj, local_coreutils_min), # must be first SOURCE_TGZ, ] source_urls = [ diff --git a/ARCHIVE/n/NWChem/NWChem-6.5.revision26243-intel-2014b-2014-09-10-Python-2.7.8.eb b/ARCHIVE/n/NWChem/NWChem-6.5.revision26243-intel-2014b-2014-09-10-Python-2.7.8.eb index 2e48ee1d..84c95a10 100644 --- a/ARCHIVE/n/NWChem/NWChem-6.5.revision26243-intel-2014b-2014-09-10-Python-2.7.8.eb +++ b/ARCHIVE/n/NWChem/NWChem-6.5.revision26243-intel-2014b-2014-09-10-Python-2.7.8.eb @@ -13,20 +13,20 @@ toolchain = {'name': 'intel', 'version': '2014b'} toolchainopts = {'i8': True} source_urls = ['http://www.nwchem-sw.org/download.php?f='] -verdate = '2014-09-10' -sources = ['Nwchem-%s-src.%s.tar.bz2' % (version, verdate)] +local_verdate = '2014-09-10' +sources = ['Nwchem-%s-src.%s.tar.bz2' % (version, local_verdate)] patches = [ 'NWChem_fix-date.patch', 'NWChem-%(version)s-parallelbuild.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.8' -versionsuffix = '-%s-%s-%s' % (verdate, python, local_pyver) -dependencies = [(python, local_pyver)] +versionsuffix = '-%s-%s-%s' % (local_verdate, local_python, local_pyver) +dependencies = [(local_python, local_pyver)] -modules = 'all python' +modules = 'all local_python' moduleclass = 'chem' diff --git a/ARCHIVE/n/NWChem/NWChem-6.6.revision27746-iomkl-2017a-2015-10-20-Python-2.7.13.eb b/ARCHIVE/n/NWChem/NWChem-6.6.revision27746-iomkl-2017a-2015-10-20-Python-2.7.13.eb index 7be7475f..11cb33ba 100644 --- a/ARCHIVE/n/NWChem/NWChem-6.6.revision27746-iomkl-2017a-2015-10-20-Python-2.7.13.eb +++ b/ARCHIVE/n/NWChem/NWChem-6.6.revision27746-iomkl-2017a-2015-10-20-Python-2.7.13.eb @@ -1,7 +1,7 @@ name = 'NWChem' version = '6.6.revision27746' -verdate = '2015-10-20' -versionsuffix = '-%s-Python-%%(local_pyver)s' % verdate +local_verdate = '2015-10-20' +versionsuffix = '-%s-Python-%%(local_pyver)s' % local_verdate homepage = 'http://www.nwchem-sw.org' description = """NWChem aims to provide its users with local_computational chemistry tools that are scalable both in @@ -15,7 +15,7 @@ toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'i8': True} source_urls = ['http://www.nwchem-sw.org/download.php?f='] -sources = ['Nwchem-%%(version)s-src.%s.tar.bz2' % verdate] +sources = ['Nwchem-%%(version)s-src.%s.tar.bz2' % local_verdate] patches = [ 'NWChem_fix-date.patch', diff --git a/ARCHIVE/n/numpy/numpy-1.8.2-intel-2015b-Python-2.7.9.eb b/ARCHIVE/n/numpy/numpy-1.8.2-intel-2015b-Python-2.7.9.eb index 033026df..8fa1316d 100644 --- a/ARCHIVE/n/numpy/numpy-1.8.2-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/n/numpy/numpy-1.8.2-intel-2015b-Python-2.7.9.eb @@ -15,12 +15,12 @@ sources = [SOURCE_TAR_GZ] patches = ['numpy-1.8.1-mkl.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ] moduleclass = 'math' diff --git a/ARCHIVE/n/numpy/numpy-1.9.1-intel-2015b-Python-2.7.9.eb b/ARCHIVE/n/numpy/numpy-1.9.1-intel-2015b-Python-2.7.9.eb index b6cb5beb..edbd97b6 100644 --- a/ARCHIVE/n/numpy/numpy-1.9.1-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/n/numpy/numpy-1.9.1-intel-2015b-Python-2.7.9.eb @@ -15,12 +15,12 @@ sources = [SOURCE_TAR_GZ] patches = ['numpy-1.8.1-mkl.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ] moduleclass = 'math' diff --git a/ARCHIVE/n/numpy/numpy-1.9.2-intel-2015b-Python-3.4.3.eb b/ARCHIVE/n/numpy/numpy-1.9.2-intel-2015b-Python-3.4.3.eb index d3aa82bd..aa4899e6 100644 --- a/ARCHIVE/n/numpy/numpy-1.9.2-intel-2015b-Python-3.4.3.eb +++ b/ARCHIVE/n/numpy/numpy-1.9.2-intel-2015b-Python-3.4.3.eb @@ -16,12 +16,12 @@ sources = [SOURCE_TAR_GZ] patches = ['numpy-1.8.0-mkl.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '3.4.3' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ] moduleclass = 'math' diff --git a/ARCHIVE/o/OpenCV/OpenCV-3.0.0-intel-2015b.eb b/ARCHIVE/o/OpenCV/OpenCV-3.0.0-intel-2015b.eb index 7b649e2b..1eb18ae7 100644 --- a/ARCHIVE/o/OpenCV/OpenCV-3.0.0-intel-2015b.eb +++ b/ARCHIVE/o/OpenCV/OpenCV-3.0.0-intel-2015b.eb @@ -25,22 +25,22 @@ builddependencies = [ ('CMake', '3.0.0'), ] -python = 'Python' -pythonver = '2.7.8' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -java = 'Java' -javaver = '1.7.0_79' +local_python = 'Python' +local_pythonver = '2.7.8' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +local_java = 'Java' +local_javaver = '1.7.0_79' dependencies = [ - (python, pythonver), + (local_python, local_pythonver), ('zlib', '1.2.8'), ('ffmpeg', '2.4'), ('libjpeg-turbo', '1.4.0'), ('libpng', '1.6.12'), ('LibTIFF', '4.0.3'), ('JasPer', '1.900.1'), - (java, javaver, '', True), - ('ant', '1.9.3', '-%s-%s' % (java, javaver), True), + (local_java, local_javaver, '', True), + ('ant', '1.9.3', '-%s-%s' % (local_java, local_javaver), True), ('GLib', '2.40.0') ] @@ -48,7 +48,7 @@ preconfigopts = 'export IPPROOT=$EBROOTICC/ipp && ' configopts = '-DCMAKE_BUILD_TYPE=RELEASE ' configopts += '-DBUILD_PYTHON_SUPPORT=ON ' -configopts += '-DPYTHON_PACKAGES_PATH=$EBROOTPYTHON/lib/python%s/site-packages ' % pythonshortver +configopts += '-DPYTHON_PACKAGES_PATH=$EBROOTPYTHON/lib/local_python%s/site-packages ' % local_pythonshortver configopts += '-DBUILD_NEW_PYTHON_SUPPORT=ON ' configopts += '-DZLIB_LIBRARY=$EBROOTZLIB/lib/libz.so ' configopts += '-DZLIB_INCLUDE_DIR=$EBROOTZLIB/include ' @@ -72,8 +72,8 @@ sanity_check_paths = { } modextrapaths = { - 'PYTHONPATH': 'lib/python%s/site-packages' % pythonshortver, - 'CLASSPATH': 'share/OpenCV/java', + 'PYTHONPATH': 'lib/local_python%s/site-packages' % local_pythonshortver, + 'CLASSPATH': 'share/OpenCV/local_java', } moduleclass = 'vis' diff --git a/ARCHIVE/o/osm2pgsql/osm2pgsql-0.92.0-intel-2017a.eb b/ARCHIVE/o/osm2pgsql/osm2pgsql-0.92.0-intel-2017a.eb index b3459c69..85bef1a4 100644 --- a/ARCHIVE/o/osm2pgsql/osm2pgsql-0.92.0-intel-2017a.eb +++ b/ARCHIVE/o/osm2pgsql/osm2pgsql-0.92.0-intel-2017a.eb @@ -15,7 +15,7 @@ checksums = ['1aee8d5fcea0e51662640a886a6818c7'] patches = ['osm2pgsql-%(version)s_fix.patch'] -files_to_copy = ['%(builddir)s/osm2pgsql'] +local_files_to_copy = ['%(builddir)s/osm2pgsql'] configopts = '-DCMAKE_CXX_COMPILER=icpc -DCMAKE_CXX_FLAGS=-std=c++11' diff --git a/ARCHIVE/o/osm2pgsql/osm2pgsql-1.0.0-intel-2017c.eb b/ARCHIVE/o/osm2pgsql/osm2pgsql-1.0.0-intel-2017c.eb index f98a166f..28a0d4eb 100644 --- a/ARCHIVE/o/osm2pgsql/osm2pgsql-1.0.0-intel-2017c.eb +++ b/ARCHIVE/o/osm2pgsql/osm2pgsql-1.0.0-intel-2017c.eb @@ -15,7 +15,7 @@ sources = ['%(version)s.tar.gz'] #patches = ['osm2pgsql-%(version)s_fix.patch'] -files_to_copy = ['%(builddir)s/osm2pgsql'] +local_files_to_copy = ['%(builddir)s/osm2pgsql'] configopts = '-DCMAKE_CXX_COMPILER=icpc -DCMAKE_CXX_FLAGS=-std=c++11' diff --git a/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2017c.eb b/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2017c.eb index 4e4ddd77..91c684ef 100644 --- a/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2017c.eb +++ b/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2017c.eb @@ -15,7 +15,7 @@ sources = ['%(version)s.tar.gz'] #patches = ['osm2pgsql-%(version)s_fix.patch'] -files_to_copy = ['%(builddir)s/osm2pgsql'] +local_files_to_copy = ['%(builddir)s/osm2pgsql'] configopts = '-DCMAKE_CXX_COMPILER=icpc -DCMAKE_CXX_FLAGS=-std=c++11' diff --git a/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2018a.eb b/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2018a.eb index 47cd7908..9e97c7c3 100644 --- a/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2018a.eb +++ b/ARCHIVE/o/osm2pgsql/osm2pgsql-1.2.1-intel-2018a.eb @@ -15,7 +15,7 @@ sources = ['%(version)s.tar.gz'] #patches = ['osm2pgsql-%(version)s_fix.patch'] -files_to_copy = ['%(builddir)s/osm2pgsql'] +local_files_to_copy = ['%(builddir)s/osm2pgsql'] configopts = '-DCMAKE_CXX_COMPILER=icpc -DCMAKE_CXX_FLAGS=-std=c++11' diff --git a/ARCHIVE/p/PCMSolver/PCMSolver-20160205-intel-2016a-Python-2.7.11.eb b/ARCHIVE/p/PCMSolver/PCMSolver-20160205-intel-2016a-Python-2.7.11.eb index ab535283..4ebf3381 100644 --- a/ARCHIVE/p/PCMSolver/PCMSolver-20160205-intel-2016a-Python-2.7.11.eb +++ b/ARCHIVE/p/PCMSolver/PCMSolver-20160205-intel-2016a-Python-2.7.11.eb @@ -12,12 +12,12 @@ toolchainopts = {'cstd': 'c99'} sources = ['2473699d6c5db36525160e.tar.gz'] source_urls = ['https://github.com/PCMSolver/pcmsolver/archive/'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.11' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('zlib', '1.2.8'), ('Boost', '1.59.0', versionsuffix), ] diff --git a/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2017a-it4i.eb b/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2017a-it4i.eb index d6d0afeb..9c4abf0f 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2017a-it4i.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2017a-it4i.eb @@ -25,8 +25,8 @@ builddependencies = [('CMake', '3.14.1', '', True)] keeppreviousinstall = True preconfigopts = 'rm -rf %(installdir)s;' -petscArch = 'intel-opt' -petscDir = '%(builddir)s/%(namelower)s-%(version)s' +local_petscArch = 'intel-opt' +local_petscDir = '%(builddir)s/%(namelower)s-%(version)s' # config options configopts = '--CFLAGS=-O3 -xHost --CXXFLAGS=-O3 -xHost --FFLAGS=-O3 -xHost --with-c++-support --with-pic=1 ' @@ -37,9 +37,9 @@ configopts += '--with-blas-lapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_in configopts += '--with-scalapack-include=$EBROOTIMKL/mkl/include ' configopts += '--with-scalapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a] ' configopts += '--with-scalapack=1 ' -configopts += 'PETSC_ARCH=%s' % petscArch +configopts += 'PETSC_ARCH=%s' % local_petscArch -installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (petscDir, petscArch) +installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (local_petscDir, local_petscArch) buildopts = installopts + ' all' modextravars = {'PETSC_DIR': '%(installdir)s'} diff --git a/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2018a-it4i.eb b/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2018a-it4i.eb index 44423ad7..fad0d1b3 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2018a-it4i.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.12.1-intel-2018a-it4i.eb @@ -25,8 +25,8 @@ builddependencies = [('CMake', '3.16.0', '-rc3', True)] keeppreviousinstall = True preconfigopts = 'rm -rf %(installdir)s;' -petscArch = 'intel-opt' -petscDir = '%(builddir)s/%(namelower)s-%(version)s' +local_petscArch = 'intel-opt' +local_petscDir = '%(builddir)s/%(namelower)s-%(version)s' # config options configopts = '--CFLAGS=-O3 -xHost --CXXFLAGS=-O3 -xHost --FFLAGS=-O3 -xHost --with-c++-support --with-pic=1 ' @@ -37,9 +37,9 @@ configopts += '--with-blas-lapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_in configopts += '--with-scalapack-include=$EBROOTIMKL/mkl/include ' configopts += '--with-scalapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a] ' configopts += '--with-scalapack=1 ' -configopts += 'PETSC_ARCH=%s' % petscArch +configopts += 'PETSC_ARCH=%s' % local_petscArch -installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (petscDir, petscArch) +installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (local_petscDir, local_petscArch) buildopts = installopts + ' all' modextravars = {'PETSC_DIR': '%(installdir)s'} diff --git a/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2018a-it4i.eb b/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2018a-it4i.eb index b24f8151..37a24108 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2018a-it4i.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2018a-it4i.eb @@ -25,8 +25,8 @@ builddependencies = [('CMake', '3.16.0', '-rc3', True)] keeppreviousinstall = True preconfigopts = 'rm -rf %(installdir)s;' -petscArch = 'intel-opt' -petscDir = '%(builddir)s/%(namelower)s-%(version)s' +local_petscArch = 'intel-opt' +local_petscDir = '%(builddir)s/%(namelower)s-%(version)s' # config options configopts = '--CFLAGS=-O3 -xHost --CXXFLAGS=-O3 -xHost --FFLAGS=-O3 -xHost --with-c++-support --with-pic=1 ' @@ -37,9 +37,9 @@ configopts += '--with-blas-lapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_in configopts += '--with-scalapack-include=$EBROOTIMKL/mkl/include ' configopts += '--with-scalapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a] ' configopts += '--with-scalapack=1 ' -configopts += 'PETSC_ARCH=%s' % petscArch +configopts += 'PETSC_ARCH=%s' % local_petscArch -installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (petscDir, petscArch) +installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (local_petscDir, local_petscArch) buildopts = installopts + ' all' modextravars = {'PETSC_DIR': '%(installdir)s'} diff --git a/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2019a-it4i.eb b/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2019a-it4i.eb index fa618af5..477a1e2e 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2019a-it4i.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.12.2-intel-2019a-it4i.eb @@ -25,8 +25,8 @@ builddependencies = [('CMake', '3.16.0', '-rc3', True)] keeppreviousinstall = True preconfigopts = 'rm -rf %(installdir)s;' -petscArch = 'intel-opt' -petscDir = '%(builddir)s/%(namelower)s-%(version)s' +local_petscArch = 'intel-opt' +local_petscDir = '%(builddir)s/%(namelower)s-%(version)s' # config options configopts = '--CFLAGS=-O3 -xHost --CXXFLAGS=-O3 -xHost --FFLAGS=-O3 -xHost --with-c++-support --with-pic=1 ' @@ -37,9 +37,9 @@ configopts += '--with-blas-lapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_in configopts += '--with-scalapack-include=$EBROOTIMKL/mkl/include ' configopts += '--with-scalapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a] ' configopts += '--with-scalapack=1 ' -configopts += 'PETSC_ARCH=%s' % petscArch +configopts += 'PETSC_ARCH=%s' % local_petscArch -installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (petscDir, petscArch) +installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (local_petscDir, local_petscArch) buildopts = installopts + ' all' modextravars = {'PETSC_DIR': '%(installdir)s'} diff --git a/ARCHIVE/p/PETSc/PETSc-3.5.1-intel-2014b-Python-2.7.8.eb b/ARCHIVE/p/PETSc/PETSc-3.5.1-intel-2014b-Python-2.7.8.eb index 72b0ef23..7dfe1e29 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.5.1-intel-2014b-Python-2.7.8.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.5.1-intel-2014b-Python-2.7.8.eb @@ -17,16 +17,16 @@ patches = [ 'PETSc-%(version)s-zlibfix.patch', ] -parmetis = 'ParMETIS' -parmetis_ver = '4.0.3' +local_parmetis = 'ParMETIS' +local_parmetis_ver = '4.0.3' dependencies = [ ('Boost', '1.55.0', versionsuffix), ('FIAT', '1.1', versionsuffix), ('METIS', '5.1.0'), - (parmetis, parmetis_ver), + (local_parmetis, local_parmetis_ver), ('ScientificPython', '2.8.1', versionsuffix), ('SCOTCH', '6.0.0_esmumps'), - ('SuiteSparse', '4.2.1', '-%s-%s' % (parmetis, parmetis_ver)), + ('SuiteSparse', '4.2.1', '-%s-%s' % (local_parmetis, local_parmetis_ver)), ('Hypre', '2.9.0b'), ] diff --git a/ARCHIVE/p/PETSc/PETSc-3.5.3-intel-2015b-Python-2.7.9.eb b/ARCHIVE/p/PETSc/PETSc-3.5.3-intel-2015b-Python-2.7.9.eb index bc72ecb8..422e14ef 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.5.3-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.5.3-intel-2015b-Python-2.7.9.eb @@ -14,16 +14,16 @@ sources = [SOURCELOWER_TAR_GZ] patches = ['PETSc_ranlib-fix.patch'] -parmetis = 'ParMETIS' -parmetis_ver = '4.0.3' +local_parmetis = 'ParMETIS' +local_parmetis_ver = '4.0.3' dependencies = [ ('Boost', '1.58.0', versionsuffix), ('FIAT', '1.6.0', versionsuffix), ('METIS', '5.1.0'), - (parmetis, parmetis_ver), + (local_parmetis, local_parmetis_ver), ('ScientificPython', '2.9.4', versionsuffix), ('SCOTCH', '6.0.3'), - ('SuiteSparse', '4.4.3', '-%s-%s' % (parmetis, parmetis_ver)), + ('SuiteSparse', '4.4.3', '-%s-%s' % (local_parmetis, local_parmetis_ver)), ('Hypre', '2.10.0b'), ] diff --git a/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2015b-Python-2.7.9.eb b/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2015b-Python-2.7.9.eb index 2c30558d..71e9e96f 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2015b-Python-2.7.9.eb @@ -16,16 +16,16 @@ sources = [SOURCELOWER_TAR_GZ] patches = ['PETSc_ranlib-fix.patch'] -parmetis = 'ParMETIS' -parmetis_ver = '4.0.3' +local_parmetis = 'ParMETIS' +local_parmetis_ver = '4.0.3' dependencies = [ ('Boost', '1.58.0', versionsuffix), ('FIAT', '1.6.0', versionsuffix), ('METIS', '5.1.0'), - (parmetis, parmetis_ver), + (local_parmetis, local_parmetis_ver), ('ScientificPython', '2.9.4', versionsuffix), ('SCOTCH', '6.0.3'), - ('SuiteSparse', '4.4.3', '-%s-%s' % (parmetis, parmetis_ver)), + ('SuiteSparse', '4.4.3', '-%s-%s' % (local_parmetis, local_parmetis_ver)), ('Hypre', '2.10.0b'), ] diff --git a/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2016.01-Python-2.7.9.eb b/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2016.01-Python-2.7.9.eb index ba20b7b2..d1ae3943 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2016.01-Python-2.7.9.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.6.1-intel-2016.01-Python-2.7.9.eb @@ -16,16 +16,16 @@ sources = [SOURCELOWER_TAR_GZ] patches = ['PETSc_ranlib-fix.patch'] -parmetis = 'ParMETIS' -parmetis_ver = '4.0.3' +local_parmetis = 'ParMETIS' +local_parmetis_ver = '4.0.3' dependencies = [ ('Boost', '1.58.0', versionsuffix), ('FIAT', '1.6.0', versionsuffix), ('METIS', '5.1.0'), - (parmetis, parmetis_ver), + (local_parmetis, local_parmetis_ver), ('ScientificPython', '2.9.4', versionsuffix), ('SCOTCH', '6.0.3'), - ('SuiteSparse', '4.4.3', '-%s-%s' % (parmetis, parmetis_ver)), + ('SuiteSparse', '4.4.3', '-%s-%s' % (local_parmetis, local_parmetis_ver)), ('Hypre', '2.10.0b'), ] diff --git a/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017a-it4i.eb b/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017a-it4i.eb index 2feefc56..004698b1 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017a-it4i.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017a-it4i.eb @@ -26,8 +26,8 @@ builddependencies = [('CMake', '3.7.2', '', True)] keeppreviousinstall = True preconfigopts = 'rm -rf %(installdir)s;' -petscArch = 'intel-opt' -petscDir = '%(builddir)s/%(namelower)s-%(version)s' +local_petscArch = 'intel-opt' +local_petscDir = '%(builddir)s/%(namelower)s-%(version)s' # config options configopts = '--CFLAGS=-O3 -xHost --CXXFLAGS=-O3 -xHost --FFLAGS=-O3 -xHost --with-c++-support --with-pic=1 ' @@ -38,9 +38,9 @@ configopts += '--with-blas-lapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_in configopts += '--with-scalapack-include=$EBROOTIMKL/mkl/include ' configopts += '--with-scalapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a] ' configopts += '--with-scalapack=1 ' -configopts += 'PETSC_ARCH=%s' % petscArch +configopts += 'PETSC_ARCH=%s' % local_petscArch -installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (petscDir, petscArch) +installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (local_petscDir, local_petscArch) buildopts = installopts + ' all' modextravars = {'PETSC_DIR': '%(installdir)s'} diff --git a/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017c-it4i.eb b/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017c-it4i.eb index ee177f7e..65a45fe9 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017c-it4i.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2017c-it4i.eb @@ -24,8 +24,8 @@ builddependencies = [('CMake', '3.14.1', '', True)] keeppreviousinstall = True preconfigopts = 'rm -rf %(installdir)s;' -petscArch = 'intel-opt' -petscDir = '%(builddir)s/%(namelower)s-%(version)s' +local_petscArch = 'intel-opt' +local_petscDir = '%(builddir)s/%(namelower)s-%(version)s' # config options configopts = '--CFLAGS=-O3 -xHost --CXXFLAGS=-O3 -xHost --FFLAGS=-O3 -xHost --with-c++-support --with-pic=1 ' @@ -36,9 +36,9 @@ configopts += '--with-blas-lapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_in configopts += '--with-scalapack-include=$EBROOTIMKL/mkl/include ' configopts += '--with-scalapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a] ' configopts += '--with-scalapack=1 ' -configopts += 'PETSC_ARCH=%s' % petscArch +configopts += 'PETSC_ARCH=%s' % local_petscArch -installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (petscDir, petscArch) +installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (local_petscDir, local_petscArch) buildopts = installopts + ' all' modextravars = {'PETSC_DIR': '%(installdir)s'} diff --git a/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2018.04-it4i.eb b/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2018.04-it4i.eb index 82a64a78..683368d1 100644 --- a/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2018.04-it4i.eb +++ b/ARCHIVE/p/PETSc/PETSc-3.7.5-intel-2018.04-it4i.eb @@ -24,8 +24,8 @@ builddependencies = [('CMake', '3.14.1', '', True)] keeppreviousinstall = True preconfigopts = 'rm -rf %(installdir)s;' -petscArch = 'intel-opt' -petscDir = '%(builddir)s/%(namelower)s-%(version)s' +local_petscArch = 'intel-opt' +local_petscDir = '%(builddir)s/%(namelower)s-%(version)s' # config options configopts = '--CFLAGS=-O3 -xHost --CXXFLAGS=-O3 -xHost --FFLAGS=-O3 -xHost --with-c++-support --with-pic=1 ' @@ -36,9 +36,9 @@ configopts += '--with-blas-lapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_in configopts += '--with-scalapack-include=$EBROOTIMKL/mkl/include ' configopts += '--with-scalapack-lib=[$EBROOTIMKL/mkl/lib/intel64_lin/libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a] ' configopts += '--with-scalapack=1 ' -configopts += 'PETSC_ARCH=%s' % petscArch +configopts += 'PETSC_ARCH=%s' % local_petscArch -installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (petscDir, petscArch) +installopts = 'PETSC_DIR=%s PETSC_ARCH=%s' % (local_petscDir, local_petscArch) buildopts = installopts + ' all' modextravars = {'PETSC_DIR': '%(installdir)s'} diff --git a/ARCHIVE/p/PRINSEQ/PRINSEQ-0.20.4-foss-2015b-Perl-5.20.3.eb b/ARCHIVE/p/PRINSEQ/PRINSEQ-0.20.4-foss-2015b-Perl-5.20.3.eb index d563dcdf..48ade5c6 100644 --- a/ARCHIVE/p/PRINSEQ/PRINSEQ-0.20.4-foss-2015b-Perl-5.20.3.eb +++ b/ARCHIVE/p/PRINSEQ/PRINSEQ-0.20.4-foss-2015b-Perl-5.20.3.eb @@ -18,15 +18,15 @@ toolchain = {'name': 'foss', 'version': '2015b'} source_urls = ['http://sourceforge.net/projects/prinseq/files/standalone/'] sources = ['%(namelower)s-lite-%(version)s.tar.gz'] -perl = 'Perl' -perlver = '5.20.3' -versionsuffix = '-%s-%s' % (perl, perlver) +local_perl = 'Perl' +local_perlver = '5.20.3' +versionsuffix = '-%s-%s' % (local_perl, local_perlver) dependencies = [ - (perl, perlver), + (local_perl, local_perlver), ] -# these are the perl libraries dependencies +# these are the local_perl libraries dependencies exts_defaultclass = 'PerlModule' exts_filter = ("perldoc -lm %(ext_name)s ", "") @@ -99,16 +99,16 @@ exts_list = [ # this is the script which relies in many extra Perl libraries so we # verify it's working fine -sanity_check_commands = [('perl', '%(installdir)s/prinseq-graphs.pl')] +sanity_check_commands = [('local_perl', '%(installdir)s/prinseq-graphs.pl')] modextrapaths = { 'PATH': "", # add installation dir to PATH - 'PERL5LIB': 'lib/perl5/site_perl/%s/' % (perlver) + 'PERL5LIB': 'lib/perl5/site_perl/%s/' % (local_perlver) } postinstallcmds = [ # fix shebang line - "sed -i -e 's|/usr/bin/perl|/usr/bin/env\ perl|' %(installdir)s/*.pl", + "sed -i -e 's|/usr/bin/local_perl|/usr/bin/env\ local_perl|' %(installdir)s/*.pl", "chmod +x %(installdir)s/*.pl" # add execution permission ] diff --git a/ARCHIVE/p/PSI/PSI-4.0b5-intel-2015a-mt-maxam7-Python-2.7.10.eb b/ARCHIVE/p/PSI/PSI-4.0b5-intel-2015a-mt-maxam7-Python-2.7.10.eb index 4c68ffbe..f156c49e 100644 --- a/ARCHIVE/p/PSI/PSI-4.0b5-intel-2015a-mt-maxam7-Python-2.7.10.eb +++ b/ARCHIVE/p/PSI/PSI-4.0b5-intel-2015a-mt-maxam7-Python-2.7.10.eb @@ -19,19 +19,19 @@ patches = [ 'PSI-4.0b5-failed-test.patch', # the test works but it segfaults on exit 'PSI-4.0b5-thread-pool.patch', 'PSI-4.0b5-new-plugin.patch', - # workaround for broken python-config due to full path to bin/python being + # workaround for broken local_python-config due to full path to bin/local_python being # used 'PSI-%(version)s_python-config.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' -pylocal_suff = '-%s-%s' % (python, local_pyver) -versionsuffix += pylocal_suff +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) +versionsuffix += local_pylocal_suff dependencies = [ - (python, local_pyver), - ('Boost', '1.59.0', pylocal_suff), + (local_python, local_pyver), + ('Boost', '1.59.0', local_pylocal_suff), ] # increase maximum angular momentum to 7 diff --git a/ARCHIVE/p/PSI/PSI-4.0b6-20160201-intel-2016a-mt-Python-2.7.11.eb b/ARCHIVE/p/PSI/PSI-4.0b6-20160201-intel-2016a-mt-Python-2.7.11.eb index ce1eac66..ea465105 100644 --- a/ARCHIVE/p/PSI/PSI-4.0b6-20160201-intel-2016a-mt-Python-2.7.11.eb +++ b/ARCHIVE/p/PSI/PSI-4.0b6-20160201-intel-2016a-mt-Python-2.7.11.eb @@ -18,15 +18,15 @@ patches = [ 'PSI-%(version)s-plugin-fix.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.11' -pylocal_suff = '-%s-%s' % (python, local_pyver) -versionsuffix += pylocal_suff +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) +versionsuffix += local_pylocal_suff dependencies = [ - (python, local_pyver), - ('Boost', '1.59.0', pylocal_suff), - ('PCMSolver', '20160205', pylocal_suff), + (local_python, local_pyver), + ('Boost', '1.59.0', local_pylocal_suff), + ('PCMSolver', '20160205', local_pylocal_suff), ('CheMPS2', '1.6'), ] diff --git a/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10-mpi.eb b/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10-mpi.eb index af5a6094..f286c765 100644 --- a/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10-mpi.eb @@ -9,25 +9,25 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2015a'} toolchainopts = {'pic': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s-source.tar.gz"] patches = ['%(name)s-%(version)s_missingheader.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' -versionsuffix = '-%s-%s-mpi' % (python, local_pyver) -pylocal_suff = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s-mpi' % (local_python, local_pyver) +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) dependencies = [ - ('Mesa', '10.5.5', pylocal_suff), - ('libGLU', '9.0.0', pylocal_suff), - ('libXt', '1.1.4', pylocal_suff), - ('Qt', '4.8.6', '%s%s' % ('-GLib-2.44.1', pylocal_suff)), - ('libXext', '1.3.3', pylocal_suff), - ('libX11', '1.6.3', pylocal_suff), + ('Mesa', '10.5.5', local_pylocal_suff), + ('libGLU', '9.0.0', local_pylocal_suff), + ('libXt', '1.1.4', local_pylocal_suff), + ('Qt', '4.8.6', '%s%s' % ('-GLib-2.44.1', local_pylocal_suff)), + ('libXext', '1.3.3', local_pylocal_suff), + ('libX11', '1.6.3', local_pylocal_suff), ('zlib', '1.2.8'), ] diff --git a/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10.eb b/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10.eb index 8bf69f17..ea821eea 100644 --- a/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10.eb +++ b/ARCHIVE/p/ParaView/ParaView-4.3.1-intel-2015a-Python-2.7.10.eb @@ -9,17 +9,17 @@ description = "ParaView is a scientific parallel visualizer" toolchain = {'name': 'intel', 'version': '2015a'} toolchainopts = {'usempi': False, 'pic': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s-source.tar.gz"] patches = ['%(name)s-%(version)s_missingheader.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ ('Mesa', '10.5.5', versionsuffix), ('libGLU', '9.0.0', versionsuffix), diff --git a/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b-mpi.eb b/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b-mpi.eb index 58234f72..b7dc27c2 100644 --- a/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b-mpi.eb @@ -10,24 +10,24 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2015b'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s-source.tar.gz"] patches = ['%(name)s-%(version)s_missingheader.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' -pylocal_suff = '-%s-%s' % (python, local_pyver) +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) dependencies = [ - ('Mesa', '11.0.2', pylocal_suff), + ('Mesa', '11.0.2', local_pylocal_suff), ('libGLU', '9.0.0'), ('libXt', '1.1.5'), ('Qt', '4.8.7'), ('libXext', '1.3.3'), - ('libX11', '1.6.3', pylocal_suff), + ('libX11', '1.6.3', local_pylocal_suff), ('zlib', '1.2.8'), ] diff --git a/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b.eb b/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b.eb index c16d9e01..49f290c0 100644 --- a/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b.eb +++ b/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2015b.eb @@ -9,24 +9,24 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2015b'} toolchainopts = {'pic': True, 'usempi': False} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s-source.tar.gz"] patches = ['%(name)s-%(version)s_missingheader.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' -pylocal_suff = '-%s-%s' % (python, local_pyver) +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) dependencies = [ - ('Mesa', '11.0.2', pylocal_suff), + ('Mesa', '11.0.2', local_pylocal_suff), ('libGLU', '9.0.0'), ('libXt', '1.1.5'), ('Qt', '4.8.7'), ('libXext', '1.3.3'), - ('libX11', '1.6.3', pylocal_suff), + ('libX11', '1.6.3', local_pylocal_suff), ('zlib', '1.2.8'), ] diff --git a/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2016a.eb b/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2016a.eb index 7b8f1698..2603c305 100644 --- a/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2016a.eb +++ b/ARCHIVE/p/ParaView/ParaView-4.4.0-intel-2016a.eb @@ -9,10 +9,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2016a'} toolchainopts = {'pic': True, 'usempi': False} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s-source.tar.gz"] patches = ['%(name)s-%(version)s_missingheader.patch'] diff --git a/ARCHIVE/p/ParaView/ParaView-5.1.2-intel-2017a-mpi.eb b/ARCHIVE/p/ParaView/ParaView-5.1.2-intel-2017a-mpi.eb index 45fe03c6..f55c9f79 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.1.2-intel-2017a-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.1.2-intel-2017a-mpi.eb @@ -10,10 +10,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] dependencies = [ diff --git a/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL.eb b/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL.eb index e671da60..bfeda8e3 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL.eb @@ -10,10 +10,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] dependencies = [ diff --git a/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL2.eb b/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL2.eb index 7067baf1..84fd6412 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL2.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay-OpenGL2.eb @@ -10,10 +10,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] dependencies = [ diff --git a/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay.eb b/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay.eb index 147365d7..7608c39e 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.4.0-intel-2017a-mpi-OSPRay.eb @@ -10,10 +10,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] dependencies = [ diff --git a/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017a-mpi.eb b/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017a-mpi.eb index dd823936..c25a2d13 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017a-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017a-mpi.eb @@ -12,10 +12,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'foss', 'version': '2018a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] checksums = ['390d0f5dc66bf432e202a39b1f34193af4bf8aad2355338fa5e2778ea07a80e4'] diff --git a/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017b-mpi.eb b/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017b-mpi.eb index 7a83ac24..b560638b 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017b-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2017b-mpi.eb @@ -12,10 +12,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'foss', 'version': '2017b'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] checksums = ['390d0f5dc66bf432e202a39b1f34193af4bf8aad2355338fa5e2778ea07a80e4'] diff --git a/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2018a-mpi.eb b/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2018a-mpi.eb index 1e24c96b..ad48a7e2 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2018a-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.4.1-foss-2018a-mpi.eb @@ -12,10 +12,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'foss', 'version': '2018a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] checksums = ['390d0f5dc66bf432e202a39b1f34193af4bf8aad2355338fa5e2778ea07a80e4'] diff --git a/ARCHIVE/p/ParaView/ParaView-5.4.1-intel-2017a-mpi.eb b/ARCHIVE/p/ParaView/ParaView-5.4.1-intel-2017a-mpi.eb index 55658399..b0a8fe30 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.4.1-intel-2017a-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.4.1-intel-2017a-mpi.eb @@ -12,10 +12,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] patches = ['ParaView-5.4.1-Qt.patch'] diff --git a/ARCHIVE/p/ParaView/ParaView-5.5.2-intel-2017a-mpi-OSPRay.eb b/ARCHIVE/p/ParaView/ParaView-5.5.2-intel-2017a-mpi-OSPRay.eb index 2844bf75..a3595e37 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.5.2-intel-2017a-mpi-OSPRay.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.5.2-intel-2017a-mpi-OSPRay.eb @@ -12,10 +12,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] patches = ['ParaView-5.5.2-intel-2017.patch'] diff --git a/ARCHIVE/p/ParaView/ParaView-5.6.0-intel-2017a-mpi.eb b/ARCHIVE/p/ParaView/ParaView-5.6.0-intel-2017a-mpi.eb index 1227bf28..b278911e 100644 --- a/ARCHIVE/p/ParaView/ParaView-5.6.0-intel-2017a-mpi.eb +++ b/ARCHIVE/p/ParaView/ParaView-5.6.0-intel-2017a-mpi.eb @@ -12,10 +12,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'intel', 'version': '2017a'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s.tar.gz"] #patches = ['ParaView-5.6.0-intel-motionfx.patch'] diff --git a/ARCHIVE/p/Paraview/Paraview-4.3-intel-2016.01-OSPRay.eb b/ARCHIVE/p/Paraview/Paraview-4.3-intel-2016.01-OSPRay.eb index 30b26319..326d26e0 100644 --- a/ARCHIVE/p/Paraview/Paraview-4.3-intel-2016.01-OSPRay.eb +++ b/ARCHIVE/p/Paraview/Paraview-4.3-intel-2016.01-OSPRay.eb @@ -9,10 +9,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = SYSTEM -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["PV4_3_pvOSPRay_linux_x86_64.tgz"] dependencies = [('intel', '2016.01')] diff --git a/ARCHIVE/p/Paraview/Paraview-5.0.0-foss-2015g.eb b/ARCHIVE/p/Paraview/Paraview-5.0.0-foss-2015g.eb index 20b9e1b1..61a104a8 100644 --- a/ARCHIVE/p/Paraview/Paraview-5.0.0-foss-2015g.eb +++ b/ARCHIVE/p/Paraview/Paraview-5.0.0-foss-2015g.eb @@ -9,22 +9,22 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'foss', 'version': '2015g'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s-source.tar.gz"] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -pylocal_suff = '-%s-%s' % (python, local_pyver) +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) dependencies = [ - ('Mesa', '11.0.8', pylocal_suff), + ('Mesa', '11.0.8', local_pylocal_suff), ('libGLU', '9.0.0'), ('libXt', '1.1.5'), ('Qt', '4.8.6'), - ('libXext', '1.3.3', pylocal_suff), - ('libX11', '1.6.2', pylocal_suff), + ('libXext', '1.3.3', local_pylocal_suff), + ('libX11', '1.6.2', local_pylocal_suff), ('zlib', '1.2.8'), ] diff --git a/ARCHIVE/p/PhyloBayes/PhyloBayes-MPI-20161021-intel-2017.00.eb b/ARCHIVE/p/PhyloBayes/PhyloBayes-MPI-20161021-intel-2017.00.eb index 0beb8092..30a96def 100644 --- a/ARCHIVE/p/PhyloBayes/PhyloBayes-MPI-20161021-intel-2017.00.eb +++ b/ARCHIVE/p/PhyloBayes/PhyloBayes-MPI-20161021-intel-2017.00.eb @@ -2,7 +2,7 @@ easyblock = 'MakeCp' name = 'PhyloBayes-MPI' version = '20161021' -commit = 'e4ea1ca' +local_commit = 'e4ea1ca' homepage = 'https://github.com/bayesiancook/pbmpi' description = "A Bayesian software for phylogenetic reconstruction using mixture models" @@ -10,7 +10,7 @@ description = "A Bayesian software for phylogenetic reconstruction using mixture toolchain = {'name': 'intel', 'version': '2017.00'} source_urls = ['https://github.com/bayesiancook/pbmpi/archive/'] -sources = ['%s.tar.gz' % commit] +sources = ['%s.tar.gz' % local_commit] start_dir = 'sources' diff --git a/ARCHIVE/p/Pillow/Pillow-3.2.0-Python-2.7.13-freetype-2.6.3.eb b/ARCHIVE/p/Pillow/Pillow-3.2.0-Python-2.7.13-freetype-2.6.3.eb index 033539ff..1fcf72b8 100644 --- a/ARCHIVE/p/Pillow/Pillow-3.2.0-Python-2.7.13-freetype-2.6.3.eb +++ b/ARCHIVE/p/Pillow/Pillow-3.2.0-Python-2.7.13-freetype-2.6.3.eb @@ -13,8 +13,8 @@ toolchain = SYSTEM source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -freetype_ver = '2.6.3' -versionsuffix += '-freetype-%s' % freetype_ver +local_freetype_ver = '2.6.3' +versionsuffix += '-freetype-%s' % local_freetype_ver dependencies = [ ('Python', '2.7.13'), @@ -22,7 +22,7 @@ dependencies = [ ('libpng', '1.6.29'), ('zlib', '1.2.11'), ('LibTIFF', '4.0.7'), - ('freetype', freetype_ver), + ('freetype', local_freetype_ver), ] options = {'modulename': 'PIL'} diff --git a/ARCHIVE/p/PostgreSQL/PostgreSQL-9.3.5-intel-2014b.eb b/ARCHIVE/p/PostgreSQL/PostgreSQL-9.3.5-intel-2014b.eb index 13adbe61..1b3ccc4c 100644 --- a/ARCHIVE/p/PostgreSQL/PostgreSQL-9.3.5-intel-2014b.eb +++ b/ARCHIVE/p/PostgreSQL/PostgreSQL-9.3.5-intel-2014b.eb @@ -20,11 +20,11 @@ toolchain = {'name': 'intel', 'version': '2014b'} osdependencies = [('openssl-devel', 'libssl-dev')] -java = 'Java' -javaver = '1.7.0_60' +local_java = 'Java' +local_javaver = '1.7.0_60' dependencies = [ - (java, javaver, '', True), + (local_java, local_javaver, '', True), ('libreadline', '6.3'), ('zlib', '1.2.8'), # ('OpenSSL', '1.0.1i'), # OS dependency should be preferred for security reasons diff --git a/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13-base.eb b/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13-base.eb index c8276dea..b3cf7810 100644 --- a/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13-base.eb +++ b/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13-base.eb @@ -17,12 +17,12 @@ patches = ['PyGObject-%(version)s_enum-types.patch'] local_pyver = '2.7.13' local_pyshortver = '.'.join(local_pyver.split('.')[:2]) -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ ('Python', '2.7.13', '-base'), ('numpy', '1.13.0', '-Python-2.7.13-base'), ('scipy', '0.19.1', '-Python-2.7.13-base'), - ('GLib', glibver), + ('GLib', local_glibver), ('GObject-Introspection', '1.47.1'), ('PyCairo', '1.10.0', versionsuffix), ] diff --git a/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13.eb b/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13.eb index ad0fb4e7..3b4c6d70 100644 --- a/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13.eb +++ b/ARCHIVE/p/PyGObject/PyGObject-2.28.6-Python-2.7.13.eb @@ -17,10 +17,10 @@ patches = ['PyGObject-%(version)s_enum-types.patch'] local_pyver = '2.7.13' local_pyshortver = '.'.join(local_pyver.split('.')[:2]) -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ ('Python', '2.7.13'), - ('GLib', glibver), + ('GLib', local_glibver), ('GObject-Introspection', '1.47.1'), ('cairo', '1.14.12'), ] diff --git a/ARCHIVE/p/PyGTK/PyGTK-2.24.0-Python-2.7.13-base.eb b/ARCHIVE/p/PyGTK/PyGTK-2.24.0-Python-2.7.13-base.eb index 87ee2e5b..8a98ac9c 100644 --- a/ARCHIVE/p/PyGTK/PyGTK-2.24.0-Python-2.7.13-base.eb +++ b/ARCHIVE/p/PyGTK/PyGTK-2.24.0-Python-2.7.13-base.eb @@ -18,12 +18,12 @@ local_pyver = '2.7.13' local_pyshortver = '.'.join(local_pyver.split('.')[:2]) versionsuffix = '-Python-%s-base' % local_pyver -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ ('Python', local_pyver, '-base'), ('numpy', '1.13.0', '-Python-2.7.13-base'), ('scipy', '0.19.1', '-Python-2.7.13-base'), - ('GLib', glibver), + ('GLib', local_glibver), ('PyGObject', '2.28.6', versionsuffix), ('GTK+', '2.24.28'), ('ATK', '2.18.0'), diff --git a/ARCHIVE/p/PyQt/PyQt-4.11.3-foss-2015g-Python-2.7.9.eb b/ARCHIVE/p/PyQt/PyQt-4.11.3-foss-2015g-Python-2.7.9.eb index dc57c66d..e854e6a1 100644 --- a/ARCHIVE/p/PyQt/PyQt-4.11.3-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/p/PyQt/PyQt-4.11.3-foss-2015g-Python-2.7.9.eb @@ -15,24 +15,24 @@ sources = ['%(name)s-x11-gpl-%(version)s.tar.gz'] source_urls = [ 'http://sourceforge.net/projects/pyqt/files/PyQt4/PyQt-%(version)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -pythonshortver = '.'.join(local_pyver.split('.')[:2]) -versionsuffix = '-%s-%s' % (python, local_pyver) +local_pythonshortver = '.'.join(local_pyver.split('.')[:2]) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('SIP', '4.16.4', versionsuffix), ('Qt', '4.8.6'), ] configopts = "configure-ng.py --confirm-license" -configopts += " --destdir=%%(installdir)s/lib/python%s/site-packages " % pythonshortver +configopts += " --destdir=%%(installdir)s/lib/local_python%s/site-packages " % local_pythonshortver configopts += " --no-sip-files" options = {'modulename': 'PyQt4'} -modextrapaths = {'PYTHONPATH': 'lib/python%s/site-packages' % pythonshortver} +modextrapaths = {'PYTHONPATH': 'lib/local_python%s/site-packages' % local_pythonshortver} sanity_check_paths = { 'files': ['lib/python2.7/site-packages/PyQt4/Qt.so'], diff --git a/ARCHIVE/p/PyQt/PyQt-4.11.4-foss-2015g-Python-2.7.9.eb b/ARCHIVE/p/PyQt/PyQt-4.11.4-foss-2015g-Python-2.7.9.eb index c80f3dd4..75162b84 100644 --- a/ARCHIVE/p/PyQt/PyQt-4.11.4-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/p/PyQt/PyQt-4.11.4-foss-2015g-Python-2.7.9.eb @@ -15,24 +15,24 @@ sources = ['%(name)s-x11-gpl-%(version)s.tar.gz'] source_urls = [ 'http://sourceforge.net/projects/pyqt/files/PyQt4/PyQt-%(version)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -pythonshortver = '.'.join(local_pyver.split('.')[:2]) -versionsuffix = '-%s-%s' % (python, local_pyver) +local_pythonshortver = '.'.join(local_pyver.split('.')[:2]) +versionsuffix = '-%s-%s' % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('SIP', '4.17', versionsuffix), ('Qt', '4.8.6'), ] configopts = "configure-ng.py --confirm-license" -configopts += " --destdir=%%(installdir)s/lib/python%s/site-packages " % pythonshortver +configopts += " --destdir=%%(installdir)s/lib/local_python%s/site-packages " % local_pythonshortver configopts += " --qsci-api" options = {'modulename': 'PyQt4'} -modextrapaths = {'PYTHONPATH': 'lib/python%s/site-packages' % pythonshortver} +modextrapaths = {'PYTHONPATH': 'lib/local_python%s/site-packages' % local_pythonshortver} sanity_check_paths = { 'files': ['lib/python2.7/site-packages/PyQt4/Qt.so'], diff --git a/ARCHIVE/p/PyYAML/PyYAML-3.11-intel-2015b-Python-2.7.9.eb b/ARCHIVE/p/PyYAML/PyYAML-3.11-intel-2015b-Python-2.7.9.eb index f011d87e..d2886289 100644 --- a/ARCHIVE/p/PyYAML/PyYAML-3.11-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/p/PyYAML/PyYAML-3.11-intel-2015b-Python-2.7.9.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = "PyYAML" version = "3.11" -homepage = "https://pypi.python.org/pypi/PyYAML/" +homepage = "https://pypi.local_python.org/pypi/PyYAML/" description = """PyYAML is a YAML parser and emitter for the Python programming language.""" toolchain = {'name': 'intel', 'version': '2015b'} @@ -11,14 +11,14 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = "Python" -pythonversion = "2.7.9" -py_short_ver = ".".join(pythonversion.split(".")[0:2]) +local_python = "Python" +local_pythonversion = "2.7.9" +local_py_short_ver = ".".join(local_pythonversion.split(".")[0:2]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('libyaml', '0.1.6'), ] @@ -26,7 +26,7 @@ options = {'modulename': 'yaml'} sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/yaml' % py_short_ver], + 'dirs': ['lib/local_python%s/site-packages/yaml' % local_py_short_ver], } moduleclass = 'lib' diff --git a/ARCHIVE/p/PyYAML/PyYAML-3.12-Python-2.7.13-base.eb b/ARCHIVE/p/PyYAML/PyYAML-3.12-Python-2.7.13-base.eb index b17e26e9..e04398ef 100644 --- a/ARCHIVE/p/PyYAML/PyYAML-3.12-Python-2.7.13-base.eb +++ b/ARCHIVE/p/PyYAML/PyYAML-3.12-Python-2.7.13-base.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = "PyYAML" version = "3.12" -homepage = "https://pypi.python.org/pypi/PyYAML/" +homepage = "https://pypi.local_python.org/pypi/PyYAML/" description = """PyYAML is a YAML parser and emitter for the Python programming language.""" toolchain = SYSTEM @@ -11,14 +11,14 @@ toolchain = SYSTEM source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = "Python" -pythonversion = "2.7.13" -py_short_ver = ".".join(pythonversion.split(".")[0:2]) +local_python = "Python" +local_pythonversion = "2.7.13" +local_py_short_ver = ".".join(local_pythonversion.split(".")[0:2]) -versionsuffix = "-%s-%s-base" % (python, pythonversion) +versionsuffix = "-%s-%s-base" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion, '-base'), + (local_python, local_pythonversion, '-base'), ('libyaml', '0.1.7'), ] @@ -26,7 +26,7 @@ options = {'modulename': 'yaml'} sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/yaml' % py_short_ver], + 'dirs': ['lib/local_python%s/site-packages/yaml' % local_py_short_ver], } moduleclass = 'lib' diff --git a/ARCHIVE/p/pWord2Vec/pWord2Vec-2018-01-25-intel-2017a.eb b/ARCHIVE/p/pWord2Vec/pWord2Vec-2018-01-25-intel-2017a.eb index 0453f994..9db104bf 100644 --- a/ARCHIVE/p/pWord2Vec/pWord2Vec-2018-01-25-intel-2017a.eb +++ b/ARCHIVE/p/pWord2Vec/pWord2Vec-2018-01-25-intel-2017a.eb @@ -32,9 +32,9 @@ builddependencies = [ ('Mercurial', '4.4.2', '', ('Py', '2.7')), ] -commands = "./install.sh " +local_commands = "./install.sh " -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['pWord2Vec', 'pWord2Vec_mpi'], 'bin'), diff --git a/ARCHIVE/p/paycheck/paycheck-1.0.2-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/p/paycheck/paycheck-1.0.2-goolf-1.4.10-Python-2.7.3.eb index 2bb90858..12ffc20d 100644 --- a/ARCHIVE/p/paycheck/paycheck-1.0.2-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/p/paycheck/paycheck-1.0.2-goolf-1.4.10-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = 'PythonPackage' name = 'paycheck' version = '1.0.2' -homepage = 'https://pypi.python.org/pypi/paycheck/' +homepage = 'https://pypi.local_python.org/pypi/paycheck/' description = """PayCheck is a half-baked implementation of ScalaCheck, which itself is an implementation of QuickCheck for Haskell. PayCheck is useful for defining a specification of what a function should do, rather than testing its results for a given input.""" toolchain = {'name': 'goolf', 'version': '1.4.10'} @@ -11,17 +11,17 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) -dependencies = [(python, local_pyver)] +dependencies = [(local_python, local_pyver)] local_pyshortver = '.'.join(local_pyver.split('.')[:2]) sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/paycheck' % local_pyshortver], + 'dirs': ['lib/local_python%s/site-packages/paycheck' % local_pyshortver], } moduleclass = 'devel' diff --git a/ARCHIVE/p/paycheck/paycheck-1.0.2-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/p/paycheck/paycheck-1.0.2-ictce-5.3.0-Python-2.7.3.eb index a3cac3df..89c89751 100644 --- a/ARCHIVE/p/paycheck/paycheck-1.0.2-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/p/paycheck/paycheck-1.0.2-ictce-5.3.0-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = 'PythonPackage' name = 'paycheck' version = '1.0.2' -homepage = 'https://pypi.python.org/pypi/paycheck/' +homepage = 'https://pypi.local_python.org/pypi/paycheck/' description = """PayCheck is a half-baked implementation of ScalaCheck, which itself is an implementation of QuickCheck for Haskell. PayCheck is useful for defining a specification of what a function should do, rather than testing its results for a given input.""" @@ -12,17 +12,17 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) -dependencies = [(python, local_pyver)] +dependencies = [(local_python, local_pyver)] local_pyshortver = '.'.join(local_pyver.split('.')[:2]) sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/paycheck' % local_pyshortver], + 'dirs': ['lib/local_python%s/site-packages/paycheck' % local_pyshortver], } moduleclass = 'devel' diff --git a/ARCHIVE/p/petsc4py/petsc4py-3.3-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/p/petsc4py/petsc4py-3.3-goolf-1.4.10-Python-2.7.3.eb index 0387cd38..f23d7626 100644 --- a/ARCHIVE/p/petsc4py/petsc4py-3.3-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/p/petsc4py/petsc4py-3.3-goolf-1.4.10-Python-2.7.3.eb @@ -11,21 +11,21 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['https://petsc4py.googlecode.com/files/'] sources = [SOURCE_TAR_GZ] -python = "Python" -python_version = "2.7.3" -versionsuffix = '-%s-%s' % (python, python_version) +local_python = "Python" +local_python_version = "2.7.3" +versionsuffix = '-%s-%s' % (local_python, local_python_version) dependencies = [ - (python, python_version), + (local_python, local_python_version), ('PETSc', '3.3-p2', versionsuffix) ] -py_short_ver = ".".join(python_version.split(".")[0:2]) -pylibdir = "lib/python%s/site-packages/%s" % (py_short_ver, name) +local_py_short_ver = ".".join(local_python_version.split(".")[0:2]) +local_pylibdir = "lib/local_python%s/site-packages/%s" % (local_py_short_ver, name) sanity_check_paths = { 'files': [], - 'dirs': [pylibdir] + 'dirs': [local_pylibdir] } moduleclass = 'tools' diff --git a/ARCHIVE/p/petsc4py/petsc4py-3.3-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/p/petsc4py/petsc4py-3.3-ictce-5.3.0-Python-2.7.3.eb index 50d6cb21..afca1666 100644 --- a/ARCHIVE/p/petsc4py/petsc4py-3.3-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/p/petsc4py/petsc4py-3.3-ictce-5.3.0-Python-2.7.3.eb @@ -12,21 +12,21 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = ['https://petsc4py.googlecode.com/files/'] sources = [SOURCE_TAR_GZ] -python = "Python" -python_version = "2.7.3" -versionsuffix = '-%s-%s' % (python, python_version) +local_python = "Python" +local_python_version = "2.7.3" +versionsuffix = '-%s-%s' % (local_python, local_python_version) dependencies = [ - (python, python_version), + (local_python, local_python_version), ('PETSc', '3.3-p2', versionsuffix) ] -py_short_ver = ".".join(python_version.split(".")[0:2]) -pylibdir = "lib/python%s/site-packages/%s" % (py_short_ver, name) +local_py_short_ver = ".".join(local_python_version.split(".")[0:2]) +local_pylibdir = "lib/local_python%s/site-packages/%s" % (local_py_short_ver, name) sanity_check_paths = { 'files': [], - 'dirs': [pylibdir] + 'dirs': [local_pylibdir] } moduleclass = 'tools' diff --git a/ARCHIVE/p/phono3py/phono3py-0.9.14-Python-2.7.9-ictce-7.3.5.eb b/ARCHIVE/p/phono3py/phono3py-0.9.14-Python-2.7.9-ictce-7.3.5.eb index 8ad7de18..c0ed0d91 100644 --- a/ARCHIVE/p/phono3py/phono3py-0.9.14-Python-2.7.9-ictce-7.3.5.eb +++ b/ARCHIVE/p/phono3py/phono3py-0.9.14-Python-2.7.9-ictce-7.3.5.eb @@ -13,20 +13,20 @@ source_urls = ['http://sourceforge.net/projects/phonopy/files/phono3py/'] patches = ['phono3py-0.9.14-mkl.patch'] # notice the hash hack to override setup.py -prebuildopts = 'python setup3.py build #' +prebuildopts = 'local_python setup3.py build #' # another hack -preinstallopts = 'python setup3.py install --prefix=%(installdir)s #' +preinstallopts = 'local_python setup3.py install --prefix=%(installdir)s #' skipsteps = ['test'] options = {'modulename': 'phonopy'} -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('LAPACKE', '3.5.0', '', ('LAPACK', '3.5.0')), ('h5py', '2.4.0', '-Python-2.7.9-serial') ] diff --git a/ARCHIVE/p/phono3py/phono3py-1.11.13.35-intel-2017a-Python-2.7.13.eb b/ARCHIVE/p/phono3py/phono3py-1.11.13.35-intel-2017a-Python-2.7.13.eb index 2a2494d1..5870dbc5 100644 --- a/ARCHIVE/p/phono3py/phono3py-1.11.13.35-intel-2017a-Python-2.7.13.eb +++ b/ARCHIVE/p/phono3py/phono3py-1.11.13.35-intel-2017a-Python-2.7.13.eb @@ -9,24 +9,24 @@ description = """This software calculates phonon-phonon interaction related prop toolchain = {'name': 'intel', 'version': '2017a'} source_urls = [ - 'https://pypi.python.org/packages/a5/93/3a9cc9f134ba1f7aa246a27c8a02137e7f9a7311df87ae656bba9051c6df/'] + 'https://pypi.local_python.org/packages/a5/93/3a9cc9f134ba1f7aa246a27c8a02137e7f9a7311df87ae656bba9051c6df/'] sources = ['%(name)s-%(version)s.tar.gz'] # notice the hash hack to override setup.py -prebuildopts = 'python setup.py build #' +prebuildopts = 'local_python setup.py build #' # another hack -preinstallopts = 'python setup.py install --prefix=%(installdir)s #' +preinstallopts = 'local_python setup.py install --prefix=%(installdir)s #' skipsteps = ['test'] options = {'modulename': 'phonopy'} -python = "Python" -pythonversion = '2.7.13' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.13' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion, '', True), + (local_python, local_pythonversion, '', True), ('OpenBLAS', '0.2.19', '-GCC-6.3.0-2.27-LAPACK-3.7.0', True), ] diff --git a/ARCHIVE/p/phono3py/phono3py-1.11.9.1-Python-2.7.9-ictce-7.3.5.eb b/ARCHIVE/p/phono3py/phono3py-1.11.9.1-Python-2.7.9-ictce-7.3.5.eb index 3755c58c..8b487c36 100644 --- a/ARCHIVE/p/phono3py/phono3py-1.11.9.1-Python-2.7.9-ictce-7.3.5.eb +++ b/ARCHIVE/p/phono3py/phono3py-1.11.9.1-Python-2.7.9-ictce-7.3.5.eb @@ -13,20 +13,20 @@ source_urls = ['http://sourceforge.net/projects/phonopy/files/phono3py/'] #patches = ['phono3py-1.11.9.1-mkl.patch'] # notice the hash hack to override setup.py -prebuildopts = 'python setup.py build #' +prebuildopts = 'local_python setup.py build #' # another hack -preinstallopts = 'python setup.py install --prefix=%(installdir)s #' +preinstallopts = 'local_python setup.py install --prefix=%(installdir)s #' skipsteps = ['test'] options = {'modulename': 'phonopy'} -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('LAPACKE', '3.5.0', '', ('LAPACK', '3.5.0')), ('h5py', '2.4.0', '-Python-2.7.9-serial') ] diff --git a/ARCHIVE/p/phonopy/phonopy-1.11.12.5-Python-2.7.13-base.eb b/ARCHIVE/p/phonopy/phonopy-1.11.12.5-Python-2.7.13-base.eb index 35fbd0a2..c8ae5bd7 100644 --- a/ARCHIVE/p/phonopy/phonopy-1.11.12.5-Python-2.7.13-base.eb +++ b/ARCHIVE/p/phonopy/phonopy-1.11.12.5-Python-2.7.13-base.eb @@ -9,17 +9,17 @@ description = """Phonopy is an open source package of phonon calculations based toolchain = SYSTEM source_urls = [ - 'https://pypi.python.org/packages/4b/25/effde7ab68249fbed654dc317354a028597bfd4a4f804d7cb3ed987c55b7/'] + 'https://pypi.local_python.org/packages/4b/25/effde7ab68249fbed654dc317354a028597bfd4a4f804d7cb3ed987c55b7/'] sources = ['%(name)s-%(version)s.tar.gz'] -python = 'Python' -pythonversion = '2.7.13' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = 'Python' +local_pythonversion = '2.7.13' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s-base" % (python, pythonversion) +versionsuffix = "-%s-%s-base" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion, '-base'), + (local_python, local_pythonversion, '-base'), ('matplotlib', '2.0.2', versionsuffix), ('lxml', '3.8.0', versionsuffix), ('PyYAML', '3.12', versionsuffix), @@ -28,6 +28,6 @@ dependencies = [ ('scipy', '0.19.1', versionsuffix) ] -pylibdir = "lib/python%s/site-packages/%%(name)s" % pythonshortversion +local_pylibdir = "lib/local_python%s/site-packages/%%(name)s" % local_pythonshortversion moduleclass = 'phys' diff --git a/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2015b-Python-2.7.9.eb b/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2015b-Python-2.7.9.eb index 10343579..9a5d29b5 100644 --- a/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2015b-Python-2.7.9.eb @@ -9,22 +9,22 @@ description = """Phonopy is an open source package of phonon calculations based toolchain = {'name': 'intel', 'version': '2015b'} source_urls = [ - 'https://pypi.python.org/packages/4b/25/effde7ab68249fbed654dc317354a028597bfd4a4f804d7cb3ed987c55b7/'] + 'https://pypi.local_python.org/packages/4b/25/effde7ab68249fbed654dc317354a028597bfd4a4f804d7cb3ed987c55b7/'] sources = ['%(name)s-%(version)s.tar.gz'] -python = 'Python' -pythonversion = '2.7.9' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = 'Python' +local_pythonversion = '2.7.9' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('matplotlib', '1.4.3', versionsuffix), ('lxml', '3.4.4', versionsuffix), ('PyYAML', '3.11', versionsuffix), ] -pylibdir = "lib/python%s/site-packages/%%(name)s" % pythonshortversion +local_pylibdir = "lib/local_python%s/site-packages/%%(name)s" % local_pythonshortversion moduleclass = 'phys' diff --git a/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2017a-Python-2.7.13-base.eb b/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2017a-Python-2.7.13-base.eb index f42fa8d2..9801c367 100644 --- a/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2017a-Python-2.7.13-base.eb +++ b/ARCHIVE/p/phonopy/phonopy-1.11.12.5-intel-2017a-Python-2.7.13-base.eb @@ -9,23 +9,23 @@ description = """Phonopy is an open source package of phonon calculations based toolchain = SYSTEM source_urls = [ - 'https://pypi.python.org/packages/4b/25/effde7ab68249fbed654dc317354a028597bfd4a4f804d7cb3ed987c55b7/'] + 'https://pypi.local_python.org/packages/4b/25/effde7ab68249fbed654dc317354a028597bfd4a4f804d7cb3ed987c55b7/'] sources = ['%(name)s-%(version)s.tar.gz'] -python = 'Python' -pythonversion = '2.7.13' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = 'Python' +local_pythonversion = '2.7.13' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s-base" % (python, pythonversion) +versionsuffix = "-%s-%s-base" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion, '-base'), + (local_python, local_pythonversion, '-base'), ('matplotlib', '2.0.2', versionsuffix), ('lxml', '3.8.0', versionsuffix), ('PyYAML', '3.12', versionsuffix), ('numpy', '1.13.0', versionsuffix), ] -pylibdir = "lib/python%s/site-packages/%%(name)s" % pythonshortversion +local_pylibdir = "lib/local_python%s/site-packages/%%(name)s" % local_pythonshortversion moduleclass = 'phys' diff --git a/ARCHIVE/p/phonopy/phonopy-1.11.2-intel-2017.00-Python-3.5.2.eb b/ARCHIVE/p/phonopy/phonopy-1.11.2-intel-2017.00-Python-3.5.2.eb index 251c1be9..39e9ca69 100644 --- a/ARCHIVE/p/phonopy/phonopy-1.11.2-intel-2017.00-Python-3.5.2.eb +++ b/ARCHIVE/p/phonopy/phonopy-1.11.2-intel-2017.00-Python-3.5.2.eb @@ -11,24 +11,24 @@ toolchain = {'name': 'intel', 'version': '2017.00'} source_urls = [SOURCEFORGE_SOURCE] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonversion = '3.5.2' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = 'Python' +local_pythonversion = '3.5.2' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), # ('matplotlib', '1.4.3', versionsuffix), # ('lxml', '3.4.4', versionsuffix), # ('PyYAML', '3.11', versionsuffix), ] -pylibdir = "lib/python%s/site-packages/%%(name)s" % pythonshortversion +local_pylibdir = "lib/local_python%s/site-packages/%%(name)s" % local_pythonshortversion # sanity_check_paths = { # 'files': [], -# 'dirs': [('%s-%%(version)s-py%s.egg' % (pylibdir, pythonshortversion), pylibdir)], +# 'dirs': [('%s-%%(version)s-py%s.egg' % (local_pylibdir, local_pythonshortversion), local_pylibdir)], #} moduleclass = 'lib' diff --git a/ARCHIVE/p/phonopy/phonopy-1.11.6.7-intel-2015b-Python-2.7.9.eb b/ARCHIVE/p/phonopy/phonopy-1.11.6.7-intel-2015b-Python-2.7.9.eb index 5061c6b8..94c5be41 100644 --- a/ARCHIVE/p/phonopy/phonopy-1.11.6.7-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/p/phonopy/phonopy-1.11.6.7-intel-2015b-Python-2.7.9.eb @@ -11,19 +11,19 @@ toolchain = {'name': 'intel', 'version': '2015b'} #source_urls = [SOURCEFORGE_SOURCE] sources = ['phonopy-1.11.6.7.tar.gz'] -python = 'Python' -pythonversion = '2.7.9' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = 'Python' +local_pythonversion = '2.7.9' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('matplotlib', '1.4.3', versionsuffix), ('lxml', '3.4.4', versionsuffix), ('PyYAML', '3.11', versionsuffix), ] -pylibdir = "lib/python%s/site-packages/%%(name)s" % pythonshortversion +local_pylibdir = "lib/local_python%s/site-packages/%%(name)s" % local_pythonshortversion moduleclass = 'phys' diff --git a/ARCHIVE/p/psmc/psmc-0.6.5-foss-2016a.eb b/ARCHIVE/p/psmc/psmc-0.6.5-foss-2016a.eb index 10a28c8d..2615c9fa 100644 --- a/ARCHIVE/p/psmc/psmc-0.6.5-foss-2016a.eb +++ b/ARCHIVE/p/psmc/psmc-0.6.5-foss-2016a.eb @@ -12,9 +12,9 @@ toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['https://github.com/lh3/psmc/archive/'] sources = ['%(version)s.tar.gz'] -buildopts = '&& cd utils && make' +buildopts = '&& cd local_utils && make' -utils = [ +local_utils = [ 'avg.pl', 'calD', 'cntcpg', @@ -34,11 +34,11 @@ utils = [ files_to_copy = [ (['psmc'], 'bin'), - (['utils/%s' % util for util in utils], 'bin') + (['local_utils/%s' % util for util in local_utils], 'bin') ] sanity_check_paths = { - 'files': ['bin/psmc'] + ['bin/%s' % util for util in utils], + 'files': ['bin/psmc'] + ['bin/%s' % util for util in local_utils], 'dirs': [], } diff --git a/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-2.7.11.eb b/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-2.7.11.eb index d1b17d95..ca6f8eb1 100644 --- a/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-2.7.11.eb +++ b/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-2.7.11.eb @@ -2,7 +2,7 @@ easyblock = 'CMakeMake' name = 'pyGIMLi' version = '20160803' -commit_id = 'a190c53' +local_commit_id = 'a190c53' versionsuffix = '-Python-%(local_pyver)s' homepage = 'http://www.pygimli.org/' @@ -14,7 +14,7 @@ description = """pyGIMLi is an open-source multi-method library for solving inve toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['https://github.com/gimli-org/gimli/archive/'] -sources = ['%s.tar.gz' % commit_id] +sources = ['%s.tar.gz' % local_commit_id] patches = ['%(name)s-%(version)s_openblas.patch'] diff --git a/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-3.5.1.eb b/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-3.5.1.eb index 8a7ca128..62dcaddb 100644 --- a/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-3.5.1.eb +++ b/ARCHIVE/p/pyGIMLi/pyGIMLi-20160803-foss-2016a-Python-3.5.1.eb @@ -2,7 +2,7 @@ easyblock = 'CMakeMake' name = 'pyGIMLi' version = '20160803' -commit_id = 'a190c53' +local_commit_id = 'a190c53' versionsuffix = '-Python-%(local_pyver)s' homepage = 'http://www.pygimli.org/' @@ -14,7 +14,7 @@ description = """pyGIMLi is an open-source multi-method library for solving inve toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['https://github.com/gimli-org/gimli/archive/'] -sources = ['%s.tar.gz' % commit_id] +sources = ['%s.tar.gz' % local_commit_id] patches = ['%(name)s-%(version)s_openblas.patch'] diff --git a/ARCHIVE/p/pyTables/pyTables-3.0.0-ictce-5.5.0-Python-2.7.6.eb b/ARCHIVE/p/pyTables/pyTables-3.0.0-ictce-5.5.0-Python-2.7.6.eb index 2c69fff0..08ae84cb 100644 --- a/ARCHIVE/p/pyTables/pyTables-3.0.0-ictce-5.5.0-Python-2.7.6.eb +++ b/ARCHIVE/p/pyTables/pyTables-3.0.0-ictce-5.5.0-Python-2.7.6.eb @@ -18,13 +18,13 @@ toolchainopts = {'usempi': True} source_urls = [SOURCEFORGE_SOURCE] sources = ['tables-%(version)s.tar.gz'] -python = 'Python' -pythonver = '2.7.6' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.6' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % (local_python, local_pythonver) dependencies = [ - (python, pythonver), + (local_python, local_pythonver), ('numexpr', '2.2.2', versionsuffix), ('HDF5', '1.8.12'), ('Cython', '0.19.2', versionsuffix), @@ -32,7 +32,7 @@ dependencies = [ sanity_check_paths = { 'files': ['bin/%s' % x for x in ['pt2to3', 'ptdump', 'ptrepack']], - 'dirs': ['lib/python%s/site-packages/tables' % pythonshortver], + 'dirs': ['lib/local_python%s/site-packages/tables' % local_pythonshortver], } options = {'modulename': 'tables'} diff --git a/ARCHIVE/p/pyTables/pyTables-3.2.2-intel-2015b-Python-2.7.10.eb b/ARCHIVE/p/pyTables/pyTables-3.2.2-intel-2015b-Python-2.7.10.eb index 7baf5de2..d96d132e 100644 --- a/ARCHIVE/p/pyTables/pyTables-3.2.2-intel-2015b-Python-2.7.10.eb +++ b/ARCHIVE/p/pyTables/pyTables-3.2.2-intel-2015b-Python-2.7.10.eb @@ -20,13 +20,13 @@ sources = ['v.%(version)s.tar.gz'] patches = ['pyTables-%(version)s-fix-libs.patch'] -python = 'Python' -pythonver = '2.7.10' -pythonshortver = '.'.join(pythonver.split('.')[0:2]) -versionsuffix = '-%s-%s' % (python, pythonver) +local_python = 'Python' +local_pythonver = '2.7.10' +local_pythonshortver = '.'.join(local_pythonver.split('.')[0:2]) +versionsuffix = '-%s-%s' % (local_python, local_pythonver) dependencies = [ - (python, pythonver), + (local_python, local_pythonver), ('numpy', '1.10.4', versionsuffix), ('numexpr', '2.4.6', versionsuffix), ('HDF5', '1.8.13'), @@ -34,7 +34,7 @@ dependencies = [ sanity_check_paths = { 'files': ['bin/%s' % x for x in ['pt2to3', 'ptdump', 'ptrepack']], - 'dirs': ['lib/python%s/site-packages' % pythonshortver], + 'dirs': ['lib/local_python%s/site-packages' % local_pythonshortver], } options = {'modulename': 'tables'} diff --git a/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-2.7.11.eb b/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-2.7.11.eb index 14095b6d..b512b7a4 100644 --- a/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-2.7.11.eb +++ b/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-2.7.11.eb @@ -2,7 +2,7 @@ easyblock = 'PythonPackage' name = 'pyplusplus' version = '20160707' -commit_id = '2c6c05b7a7d2' +local_commit_id = '2c6c05b7a7d2' versionsuffix = '-Python-%(local_pyver)s' homepage = 'https://bitbucket.org/ompl/pyplusplus' @@ -13,7 +13,7 @@ description = """Py++ is a code generator for Boost.Python that simplifies toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['https://bitbucket.org/ompl/pyplusplus/get/'] -sources = ['%s.zip' % commit_id] +sources = ['%s.zip' % local_commit_id] builddependencies = [('pip', '8.1.2', versionsuffix)] diff --git a/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-3.5.1.eb b/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-3.5.1.eb index 334a3c6b..72f8b4a1 100644 --- a/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-3.5.1.eb +++ b/ARCHIVE/p/pyplusplus/pyplusplus-20160707-foss-2016a-Python-3.5.1.eb @@ -2,7 +2,7 @@ easyblock = 'PythonPackage' name = 'pyplusplus' version = '20160707' -commit_id = '2c6c05b7a7d2' +local_commit_id = '2c6c05b7a7d2' versionsuffix = '-Python-%(local_pyver)s' homepage = 'https://bitbucket.org/ompl/pyplusplus' @@ -13,7 +13,7 @@ description = """Py++ is a code generator for Boost.Python that simplifies toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['https://bitbucket.org/ompl/pyplusplus/get/'] -sources = ['%s.zip' % commit_id] +sources = ['%s.zip' % local_commit_id] dependencies = [ ('Python', '3.5.1'), diff --git a/ARCHIVE/p/python-meep/python-meep-1.4.2-intel-2015b-Python-2.7.9-Meep-1.3.eb b/ARCHIVE/p/python-meep/python-meep-1.4.2-intel-2015b-Python-2.7.9-Meep-1.3.eb index 87c6c876..2ef4fc1f 100644 --- a/ARCHIVE/p/python-meep/python-meep-1.4.2-intel-2015b-Python-2.7.9-Meep-1.3.eb +++ b/ARCHIVE/p/python-meep/python-meep-1.4.2-intel-2015b-Python-2.7.9-Meep-1.3.eb @@ -1,28 +1,28 @@ -name = 'python-meep' +name = 'local_python-local_meep' version = '1.4.2' -homepage = 'https://code.launchpad.net/python-meep' +homepage = 'https://code.launchpad.net/local_python-local_meep' description = """Python wrapper for the Meep FDTD solver.""" toolchain = {'name': 'intel', 'version': '2015b'} toolchainopts = {'pic': True, 'opt': True, 'optarch': True, 'usempi': True} -source_urls = ["https://launchpad.net/python-meep/1.4/1.4/+download/"] +source_urls = ["https://launchpad.net/local_python-local_meep/1.4/1.4/+download/"] sources = [SOURCELOWER_TAR] patches = ['MPI_destructor_1.3.patch'] -python = 'Python' -pythonver = '2.7.9' -meep = 'Meep' -meepver = '1.3' -versionsuffix = '-%s-%s-%s-%s' % (python, pythonver, meep, meepver) +local_python = 'Python' +local_pythonver = '2.7.9' +local_meep = 'Meep' +local_meepver = '1.3' +versionsuffix = '-%s-%s-%s-%s' % (local_python, local_pythonver, local_meep, local_meepver) dependencies = [ - (python, pythonver), - (meep, meepver), + (local_python, local_pythonver), + (local_meep, local_meepver), ] -builddependencies = [('SWIG', '2.0.12', '-%s-%s' % (python, pythonver))] +builddependencies = [('SWIG', '2.0.12', '-%s-%s' % (local_python, local_pythonver))] moduleclass = 'devel' diff --git a/ARCHIVE/p/python/python-dateutil-2.1-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/p/python/python-dateutil-2.1-goolf-1.4.10-Python-2.7.3.eb index 9f1bdc61..1039108f 100644 --- a/ARCHIVE/p/python/python-dateutil-2.1-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/p/python/python-dateutil-2.1-goolf-1.4.10-Python-2.7.3.eb @@ -1,9 +1,9 @@ easyblock = "PythonPackage" -name = "python-dateutil" +name = "local_python-dateutil" version = "2.1" -homepage = "https://pypi.python.org/pypi/python-dateutil" +homepage = "https://pypi.local_python.org/pypi/local_python-dateutil" description = """The dateutil module provides powerful extensions to the datetime module available in the Python standard library.""" toolchain = {'name': 'goolf', 'version': '1.4.10'} @@ -11,17 +11,17 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = [PYPI_LOWER_SOURCE] sources = [SOURCE_TAR_GZ] -python = "Python" -pythonversion = "2.7.3" +local_python = "Python" +local_pythonversion = "2.7.3" -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] -py_short_ver = '.'.join(pythonversion.split('.')[:2]) +local_py_short_ver = '.'.join(local_pythonversion.split('.')[:2]) sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages' % py_short_ver], + 'dirs': ['lib/local_python%s/site-packages' % local_py_short_ver], } options = {'modulename': 'dateutil'} diff --git a/ARCHIVE/q/QGIS/QGIS-2.12.3-foss-2015g.eb b/ARCHIVE/q/QGIS/QGIS-2.12.3-foss-2015g.eb index 4f91d068..f05a1644 100644 --- a/ARCHIVE/q/QGIS/QGIS-2.12.3-foss-2015g.eb +++ b/ARCHIVE/q/QGIS/QGIS-2.12.3-foss-2015g.eb @@ -16,9 +16,9 @@ builddependencies = [('CMake', '3.3.1')] separate_build_dir = True -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -pylocal_suff = '-%s-%s' % (python, local_pyver) +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) dependencies = [('QCA', '2.1.0'), ('Qt', '4.8.6'), @@ -29,8 +29,8 @@ dependencies = [('QCA', '2.1.0'), ('Qwt', '6.1.2'), ('expat', '2.1.0'), ('SpatiaLite', '4.3.0a'), - ('SIP', '4.17', pylocal_suff), - ('PyQt', '4.11.4', pylocal_suff), + ('SIP', '4.17', local_pylocal_suff), + ('PyQt', '4.11.4', local_pylocal_suff), ('spatialindex', '1.8.5'), ] diff --git a/ARCHIVE/q/Qt/Qt-4.8.7-foss-2016a-GLib-2.48.0.eb b/ARCHIVE/q/Qt/Qt-4.8.7-foss-2016a-GLib-2.48.0.eb index ecaceec7..2fc4d442 100644 --- a/ARCHIVE/q/Qt/Qt-4.8.7-foss-2016a-GLib-2.48.0.eb +++ b/ARCHIVE/q/Qt/Qt-4.8.7-foss-2016a-GLib-2.48.0.eb @@ -13,11 +13,11 @@ sources = ['%(namelower)s-everywhere-opensource-src-%(version)s.tar.gz'] patches = ['Qt-%(version)s_phonon-export.patch'] -glib_ver = '2.48.0' -versionsuffix = '-GLib-%s' % glib_ver +local_glib_ver = '2.48.0' +versionsuffix = '-GLib-%s' % local_glib_ver dependencies = [ - ('GLib', glib_ver), + ('GLib', local_glib_ver), ('libX11', '1.6.3'), ('libXt', '1.1.5'), ('libXrender', '0.9.9'), diff --git a/ARCHIVE/q/Qt/Qt-4.8.7-intel-2016a-GLib-2.48.0.eb b/ARCHIVE/q/Qt/Qt-4.8.7-intel-2016a-GLib-2.48.0.eb index 6d28f1c8..6e9395d5 100644 --- a/ARCHIVE/q/Qt/Qt-4.8.7-intel-2016a-GLib-2.48.0.eb +++ b/ARCHIVE/q/Qt/Qt-4.8.7-intel-2016a-GLib-2.48.0.eb @@ -13,11 +13,11 @@ sources = ['%(namelower)s-everywhere-opensource-src-%(version)s.tar.gz'] patches = ['Qt-%(version)s_phonon-export.patch'] -glib_ver = '2.48.0' -versionsuffix = '-GLib-%s' % glib_ver +local_glib_ver = '2.48.0' +versionsuffix = '-GLib-%s' % local_glib_ver dependencies = [ - ('GLib', glib_ver), + ('GLib', local_glib_ver), ('libX11', '1.6.3'), ('libXt', '1.1.5'), ('libXrender', '0.9.9'), diff --git a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-5.4.0-foss-2015g.eb b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-5.4.0-foss-2015g.eb index 736528e8..a92af884 100644 --- a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-5.4.0-foss-2015g.eb +++ b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-5.4.0-foss-2015g.eb @@ -42,7 +42,7 @@ patches = [ 'QuantumESPRESSO-%(version)s_yambo-fixes.patch', ] -dependency = [ +local_dependency = [ ('Boost', '1.58.0', '-Python-2.7.9'), ] diff --git a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017.00.eb b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017.00.eb index e3b5b5fa..5ce6b38d 100644 --- a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017.00.eb +++ b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017.00.eb @@ -22,7 +22,7 @@ sources = [ 'want-2.5.1-base.tar.gz', 'yambo-4.1.2-rev.120.tar.gz', ] -missing_sources = [ +local_missing_sources = [ 'sax-2.0.3.tar.gz', # nowhere to be found ] source_urls = [ diff --git a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017a.eb b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017a.eb index f4dbcb5b..a4f3d5d9 100644 --- a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017a.eb +++ b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.0-intel-2017a.eb @@ -22,7 +22,7 @@ sources = [ 'want-2.5.1-base.tar.gz', 'yambo-3.4.2.tgz', ] -missing_sources = [ +local_missing_sources = [ 'sax-2.0.3.tar.gz', # nowhere to be found ] source_urls = [ diff --git a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.1-intel-2017a.eb b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.1-intel-2017a.eb index c501fd39..8117d28d 100644 --- a/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.1-intel-2017a.eb +++ b/ARCHIVE/q/QuantumESPRESSO/QuantumESPRESSO-6.1-intel-2017a.eb @@ -23,7 +23,7 @@ sources = [ 'West-2.0.1.tar.gz', 'yambo-3.4.2.tgz', ] -missing_sources = [ +local_missing_sources = [ 'sax-2.0.3.tar.gz', # nowhere to be found ] source_urls = [ diff --git a/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-foss-2016a-R-3.2.3.eb b/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-foss-2016a-R-3.2.3.eb index 5da63000..763f052b 100644 --- a/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-foss-2016a-R-3.2.3.eb +++ b/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-foss-2016a-R-3.2.3.eb @@ -2,7 +2,7 @@ easyblock = 'Bundle' name = 'R-bundle-Bioconductor' version = '3.2' -versionsuffix = '-R-%(rver)s' +versionsuffix = '-R-%(local_rver)s' homepage = 'http://www.r-project.org/' description = """R is a free software environment for statistical local_computing and graphics.""" @@ -13,12 +13,12 @@ toolchain = {'name': 'foss', 'version': '2016a'} exts_defaultclass = 'RPackage' exts_filter = ("R -q --no-save", "library(%(ext_name)s)") -rver = '3.2.3' -versionsuffix = '-R-%s' % rver -dependencies = [('R', rver)] +local_rver = '3.2.3' +versionsuffix = '-R-%s' % local_rver +dependencies = [('R', local_rver)] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -26,123 +26,123 @@ ext_options = { # mirror alternative for current packages 'http://cran.freestatistics.org/src/contrib', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/3.2/bioc/src/contrib/', 'http://www.bioconductor.org/packages/3.2/data/annotation/src/contrib/', 'http://www.bioconductor.org/packages/3.2/data/experiment/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # CRAN packages on which these Bioconductor packages depend are available in R module on which this depends # !! order of packages is important !! exts_list = [ - ('BiocGenerics', '0.16.1', bioconductor_options), - ('Biobase', '2.30.0', bioconductor_options), - ('S4Vectors', '0.8.11', bioconductor_options), - ('IRanges', '2.4.8', bioconductor_options), - ('GenomeInfoDb', '1.6.3', bioconductor_options), - ('AnnotationDbi', '1.32.3', bioconductor_options), - ('zlibbioc', '1.16.0', bioconductor_options), - ('XVector', '0.10.0', bioconductor_options), - ('Biostrings', '2.38.4', bioconductor_options), - ('GenomicRanges', '1.22.4', bioconductor_options), - ('BiocParallel', '1.4.3', bioconductor_options), - ('Rsamtools', '1.22.0', bioconductor_options), - ('lambda.r', '1.1.7', ext_options), - ('futile.options', '1.0.0', ext_options), - ('futile.logger', '1.4.1', ext_options), - ('SummarizedExperiment', '1.0.2', bioconductor_options), - ('GenomicAlignments', '1.6.3', bioconductor_options), - ('ShortRead', '1.28.0', bioconductor_options), - ('graph', '1.48.0', bioconductor_options), - ('affyio', '1.40.0', bioconductor_options), - ('BiocInstaller', '1.20.1', bioconductor_options), - ('preprocessCore', '1.32.0', bioconductor_options), - ('affy', '1.48.0', bioconductor_options), - ('GO.db', '3.2.2', bioconductor_options), - ('limma', '3.26.9', bioconductor_options), - ('RBGL', '1.46.0', bioconductor_options), - ('org.Hs.eg.db', '3.2.3', bioconductor_options), - ('AnnotationForge', '1.12.2', bioconductor_options), - ('KEGG.db', '3.2.2', bioconductor_options), - ('annaffy', '1.42.0', bioconductor_options), - ('gcrma', '2.42.0', bioconductor_options), - ('oligoClasses', '1.32.0', bioconductor_options), - ('edgeR', '3.12.1', bioconductor_options), - ('PFAM.db', '3.2.2', bioconductor_options), - ('perm', '1.0-0.0', ext_options), - ('baySeq', '2.4.1', bioconductor_options), - ('qvalue', '2.2.2', bioconductor_options), - ('impute', '1.44.0', bioconductor_options), - ('samr', '2.0', ext_options), - ('DEGseq', '1.24.0', bioconductor_options), - ('hgu133plus2.db', '3.2.2', bioconductor_options), - ('illuminaio', '0.12.0', bioconductor_options), - ('rtracklayer', '1.30.4', bioconductor_options), - ('biomaRt', '2.26.1', bioconductor_options), - ('GenomicFeatures', '1.22.13', bioconductor_options), - ('bumphunter', '1.10.0', bioconductor_options), - ('multtest', '2.26.0', bioconductor_options), - ('siggenes', '1.44.0', bioconductor_options), - ('DynDoc', '1.48.0', bioconductor_options), - ('genoset', '1.24.0', bioconductor_options), - ('NOISeq', '2.14.1', bioconductor_options), - ('Rgraphviz', '2.14.0', bioconductor_options), - ('RNASeqPower', '1.10.0', bioconductor_options), - ('annotate', '1.48.0', bioconductor_options), - ('GSEABase', '1.32.0', bioconductor_options), - ('genefilter', '1.52.1', bioconductor_options), - ('Category', '2.36.0', bioconductor_options), - ('GOstats', '2.36.0', bioconductor_options), - ('BSgenome', '1.38.0', bioconductor_options), - ('VariantAnnotation', '1.16.4', bioconductor_options), - ('biovizBase', '1.18.0', bioconductor_options), - ('OrganismDbi', '1.12.1', bioconductor_options), - ('ggbio', '1.18.5', bioconductor_options), - ('geneplotter', '1.48.0', bioconductor_options), - ('DESeq2', '1.10.1', bioconductor_options), - ('ReportingTools', '2.10.0', bioconductor_options), - ('affycoretools', '1.42.0', bioconductor_options), - ('TxDb.Hsapiens.UCSC.hg19.knownGene', '3.2.2', bioconductor_options), - ('Homo.sapiens', '1.3.1', bioconductor_options), - ('BSgenome.Hsapiens.UCSC.hg19', '1.4.0', bioconductor_options), - ('AgiMicroRna', '2.20.0', bioconductor_options), - ('GenomeGraphs', '1.30.0', bioconductor_options), - ('geneLenDataBase', '1.6.0', bioconductor_options), - ('goseq', '1.22.0', bioconductor_options), - ('KEGGREST', '1.10.1', bioconductor_options), - ('KEGGgraph', '1.28.0', bioconductor_options), - ('KEGGprofile', '1.12.0', bioconductor_options), - ('GEOquery', '2.36.0', bioconductor_options), - ('mixOmics', '5.2.0', ext_options), - ('minfi', '1.16.1', bioconductor_options), - ('FDb.InfiniumMethylation.hg19', '2.2.0', bioconductor_options), - ('methylumi', '2.16.0', bioconductor_options), - ('lumi', '2.22.1', bioconductor_options), - ('widgetTools', '1.48.0', bioconductor_options), - ('tkWidgets', '1.48.0', bioconductor_options), - ('Mfuzz', '2.30.0', bioconductor_options), - ('maSigPro', '1.42.0', bioconductor_options), - ('SPIA', '2.22.0', bioconductor_options), - ('Gviz', '1.14.7', bioconductor_options), - ('cummeRbund', '2.12.1', bioconductor_options), - ('GenomicFiles', '1.6.2', bioconductor_options), - ('derfinderHelper', '1.4.1', bioconductor_options), - ('derfinder', '1.4.4', bioconductor_options), - ('polyester', '1.6.0', bioconductor_options), - ('Rsubread', '1.20.5', bioconductor_options), - ('pcaMethods', '1.60.0', bioconductor_options), - ('marray', '1.48.0', bioconductor_options), - ('CGHbase', '1.30.0', bioconductor_options), - ('sigaR', '1.14.0', bioconductor_options), - ('HCsnip', '1.10.0', bioconductor_options), - ('metagenomeSeq', '1.12.0', bioconductor_options), - ('gdsfmt', '1.6.2', bioconductor_options), - ('SNPRelate', '1.4.2', bioconductor_options), + ('BiocGenerics', '0.16.1', local_bioconductor_options), + ('Biobase', '2.30.0', local_bioconductor_options), + ('S4Vectors', '0.8.11', local_bioconductor_options), + ('IRanges', '2.4.8', local_bioconductor_options), + ('GenomeInfoDb', '1.6.3', local_bioconductor_options), + ('AnnotationDbi', '1.32.3', local_bioconductor_options), + ('zlibbioc', '1.16.0', local_bioconductor_options), + ('XVector', '0.10.0', local_bioconductor_options), + ('Biostrings', '2.38.4', local_bioconductor_options), + ('GenomicRanges', '1.22.4', local_bioconductor_options), + ('BiocParallel', '1.4.3', local_bioconductor_options), + ('Rsamtools', '1.22.0', local_bioconductor_options), + ('lambda.r', '1.1.7', local_ext_options), + ('futile.options', '1.0.0', local_ext_options), + ('futile.logger', '1.4.1', local_ext_options), + ('SummarizedExperiment', '1.0.2', local_bioconductor_options), + ('GenomicAlignments', '1.6.3', local_bioconductor_options), + ('ShortRead', '1.28.0', local_bioconductor_options), + ('graph', '1.48.0', local_bioconductor_options), + ('affyio', '1.40.0', local_bioconductor_options), + ('BiocInstaller', '1.20.1', local_bioconductor_options), + ('preprocessCore', '1.32.0', local_bioconductor_options), + ('affy', '1.48.0', local_bioconductor_options), + ('GO.db', '3.2.2', local_bioconductor_options), + ('limma', '3.26.9', local_bioconductor_options), + ('RBGL', '1.46.0', local_bioconductor_options), + ('org.Hs.eg.db', '3.2.3', local_bioconductor_options), + ('AnnotationForge', '1.12.2', local_bioconductor_options), + ('KEGG.db', '3.2.2', local_bioconductor_options), + ('annaffy', '1.42.0', local_bioconductor_options), + ('gcrma', '2.42.0', local_bioconductor_options), + ('oligoClasses', '1.32.0', local_bioconductor_options), + ('edgeR', '3.12.1', local_bioconductor_options), + ('PFAM.db', '3.2.2', local_bioconductor_options), + ('perm', '1.0-0.0', local_ext_options), + ('baySeq', '2.4.1', local_bioconductor_options), + ('qvalue', '2.2.2', local_bioconductor_options), + ('impute', '1.44.0', local_bioconductor_options), + ('samr', '2.0', local_ext_options), + ('DEGseq', '1.24.0', local_bioconductor_options), + ('hgu133plus2.db', '3.2.2', local_bioconductor_options), + ('illuminaio', '0.12.0', local_bioconductor_options), + ('rtracklayer', '1.30.4', local_bioconductor_options), + ('biomaRt', '2.26.1', local_bioconductor_options), + ('GenomicFeatures', '1.22.13', local_bioconductor_options), + ('bumphunter', '1.10.0', local_bioconductor_options), + ('multtest', '2.26.0', local_bioconductor_options), + ('siggenes', '1.44.0', local_bioconductor_options), + ('DynDoc', '1.48.0', local_bioconductor_options), + ('genoset', '1.24.0', local_bioconductor_options), + ('NOISeq', '2.14.1', local_bioconductor_options), + ('Rgraphviz', '2.14.0', local_bioconductor_options), + ('RNASeqPower', '1.10.0', local_bioconductor_options), + ('annotate', '1.48.0', local_bioconductor_options), + ('GSEABase', '1.32.0', local_bioconductor_options), + ('genefilter', '1.52.1', local_bioconductor_options), + ('Category', '2.36.0', local_bioconductor_options), + ('GOstats', '2.36.0', local_bioconductor_options), + ('BSgenome', '1.38.0', local_bioconductor_options), + ('VariantAnnotation', '1.16.4', local_bioconductor_options), + ('biovizBase', '1.18.0', local_bioconductor_options), + ('OrganismDbi', '1.12.1', local_bioconductor_options), + ('ggbio', '1.18.5', local_bioconductor_options), + ('geneplotter', '1.48.0', local_bioconductor_options), + ('DESeq2', '1.10.1', local_bioconductor_options), + ('ReportingTools', '2.10.0', local_bioconductor_options), + ('affycoretools', '1.42.0', local_bioconductor_options), + ('TxDb.Hsapiens.UCSC.hg19.knownGene', '3.2.2', local_bioconductor_options), + ('Homo.sapiens', '1.3.1', local_bioconductor_options), + ('BSgenome.Hsapiens.UCSC.hg19', '1.4.0', local_bioconductor_options), + ('AgiMicroRna', '2.20.0', local_bioconductor_options), + ('GenomeGraphs', '1.30.0', local_bioconductor_options), + ('geneLenDataBase', '1.6.0', local_bioconductor_options), + ('goseq', '1.22.0', local_bioconductor_options), + ('KEGGREST', '1.10.1', local_bioconductor_options), + ('KEGGgraph', '1.28.0', local_bioconductor_options), + ('KEGGprofile', '1.12.0', local_bioconductor_options), + ('GEOquery', '2.36.0', local_bioconductor_options), + ('mixOmics', '5.2.0', local_ext_options), + ('minfi', '1.16.1', local_bioconductor_options), + ('FDb.InfiniumMethylation.hg19', '2.2.0', local_bioconductor_options), + ('methylumi', '2.16.0', local_bioconductor_options), + ('lumi', '2.22.1', local_bioconductor_options), + ('widgetTools', '1.48.0', local_bioconductor_options), + ('tkWidgets', '1.48.0', local_bioconductor_options), + ('Mfuzz', '2.30.0', local_bioconductor_options), + ('maSigPro', '1.42.0', local_bioconductor_options), + ('SPIA', '2.22.0', local_bioconductor_options), + ('Gviz', '1.14.7', local_bioconductor_options), + ('cummeRbund', '2.12.1', local_bioconductor_options), + ('GenomicFiles', '1.6.2', local_bioconductor_options), + ('derfinderHelper', '1.4.1', local_bioconductor_options), + ('derfinder', '1.4.4', local_bioconductor_options), + ('polyester', '1.6.0', local_bioconductor_options), + ('Rsubread', '1.20.5', local_bioconductor_options), + ('pcaMethods', '1.60.0', local_bioconductor_options), + ('marray', '1.48.0', local_bioconductor_options), + ('CGHbase', '1.30.0', local_bioconductor_options), + ('sigaR', '1.14.0', local_bioconductor_options), + ('HCsnip', '1.10.0', local_bioconductor_options), + ('metagenomeSeq', '1.12.0', local_bioconductor_options), + ('gdsfmt', '1.6.2', local_bioconductor_options), + ('SNPRelate', '1.4.2', local_bioconductor_options), ] modextrapaths = {'R_LIBS': ''} diff --git a/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-intel-2016a-R-3.2.3.eb b/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-intel-2016a-R-3.2.3.eb index 7d4405d3..cfc316fa 100644 --- a/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-intel-2016a-R-3.2.3.eb +++ b/ARCHIVE/r/R-bundle-Bioconductor/R-bundle-Bioconductor-3.2-intel-2016a-R-3.2.3.eb @@ -12,12 +12,12 @@ toolchain = {'name': 'intel', 'version': '2016a'} exts_defaultclass = 'RPackage' exts_filter = ("R -q --no-save", "library(%(ext_name)s)") -rver = '3.2.3' -versionsuffix = '-R-%s' % rver -dependencies = [('R', rver)] +local_rver = '3.2.3' +versionsuffix = '-R-%s' % local_rver +dependencies = [('R', local_rver)] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -25,123 +25,123 @@ ext_options = { # mirror alternative for current packages 'http://cran.freestatistics.org/src/contrib', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/3.2/bioc/src/contrib/', 'http://www.bioconductor.org/packages/3.2/data/annotation/src/contrib/', 'http://www.bioconductor.org/packages/3.2/data/experiment/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # CRAN packages on which these Bioconductor packages depend are available in R module on which this depends # !! order of packages is important !! exts_list = [ - ('BiocGenerics', '0.16.1', bioconductor_options), - ('Biobase', '2.30.0', bioconductor_options), - ('S4Vectors', '0.8.11', bioconductor_options), - ('IRanges', '2.4.8', bioconductor_options), - ('GenomeInfoDb', '1.6.3', bioconductor_options), - ('AnnotationDbi', '1.32.3', bioconductor_options), - ('zlibbioc', '1.16.0', bioconductor_options), - ('XVector', '0.10.0', bioconductor_options), - ('Biostrings', '2.38.4', bioconductor_options), - ('GenomicRanges', '1.22.4', bioconductor_options), - ('BiocParallel', '1.4.3', bioconductor_options), - ('Rsamtools', '1.22.0', bioconductor_options), - ('lambda.r', '1.1.7', ext_options), - ('futile.options', '1.0.0', ext_options), - ('futile.logger', '1.4.1', ext_options), - ('SummarizedExperiment', '1.0.2', bioconductor_options), - ('GenomicAlignments', 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b/ARCHIVE/r/R/R-3.2.3-foss-2015b.eb index 23c38e39..3672cd4c 100644 --- a/ARCHIVE/r/R/R-3.2.3-foss-2015b.eb +++ b/ARCHIVE/r/R/R-3.2.3-foss-2015b.eb @@ -30,8 +30,8 @@ dependencies = [ ('PROJ', '4.8.0'), # for rgdal ] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -39,7 +39,7 @@ ext_options = { # mirror alternative for current packages 'http://cran.freestatistics.org/src/contrib', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } @@ -59,390 +59,390 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.6-5', ext_options), - ('abind', '1.4-3', ext_options), - ('magic', '1.5-6', ext_options), - ('geometry', '0.3-6', ext_options), - ('bit', '1.1-12', ext_options), - ('filehash', '2.3', ext_options), - ('ff', '2.2-13', ext_options), - 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local_ext_options), + ('miscTools', '0.6-16', local_ext_options), + ('maxLik', '1.3-4', local_ext_options), + ('mlogit', '0.2-4', local_ext_options), + ('getopt', '1.20.0', local_ext_options), + ('gsalib', '2.1', local_ext_options), + ('optparse', '1.3.2', local_ext_options), + ('klaR', '0.6-12', local_ext_options), + ('neuRosim', '0.2-12', local_ext_options), + ('locfit', '1.5-9.1', local_ext_options), + ('GGally', '1.0.0', local_ext_options), + ('beanplot', '1.2', local_ext_options), + ('clValid', '0.6-6', local_ext_options), + ('matrixStats', '0.50.1', local_ext_options), + ('DiscriMiner', '0.1-29', local_ext_options), + ('ellipse', '0.3-8', local_ext_options), + ('leaps', '2.9', local_ext_options), + ('nloptr', '1.0.4', local_ext_options), + ('lme4', '1.1-10', local_ext_options), + ('pbkrtest', '0.4-4', local_ext_options), + ('car', '2.1-1', local_ext_options), + ('flashClust', '1.01-2', local_ext_options), + ('FactoMineR', '1.31.4', local_ext_options), + ('modeltools', '0.2-21', local_ext_options), + ('flexclust', '1.3-4', local_ext_options), + ('flexmix', '2.3-13', local_ext_options), + ('prabclus', '2.2-6', local_ext_options), + ('diptest', '0.75-7', local_ext_options), + ('trimcluster', '0.1-2', local_ext_options), + ('fpc', '2.1-10', local_ext_options), + ('BiasedUrn', '1.07', local_ext_options), + ('TeachingDemos', '2.9', local_ext_options), + ('kohonen', '2.0.19', local_ext_options), + ('base64', '1.1', local_ext_options), + ('doRNG', '1.6', local_ext_options), + ('nleqslv', '2.9.1', local_ext_options), + ('RGCCA', '2.0', local_ext_options), + ('pheatmap', '1.0.8', local_ext_options), + ('openxlsx', '3.0.0', local_ext_options), + ('pvclust', '2.0-0', local_ext_options), + ('RCircos', '1.1.3', local_ext_options), + ('lambda.r', '1.1.7', local_ext_options), + ('futile.options', '1.0.0', local_ext_options), + ('futile.logger', '1.4.1', local_ext_options), + ('VennDiagram', '1.6.16', local_ext_options), + ('xlsxjars', '0.6.1', local_ext_options), + ('xlsx', '0.5.7', local_ext_options), + ('vegan', '2.3-2', local_ext_options), + ('forecast', '6.1', local_ext_options), + ('fma', '2.01', local_ext_options), + ('expsmooth', '2.3', local_ext_options), + ('fpp', '0.5', local_ext_options), + ('maptools', '0.8-37', local_ext_options), + ('deldir', '0.1-9', local_ext_options), + ('tensor', '1.5', local_ext_options), + ('polyclip', '1.3-2', local_ext_options), + ('goftest', '1.0-3', local_ext_options), + ('spatstat', '1.44-1', local_ext_options), + ('rgdal', '1.1-3', local_ext_options), + ('gdalUtils', '2.0.1.7', local_ext_options), + ('pracma', '1.8.8', local_ext_options), + ('RCurl', '1.95-4.7', local_ext_options), + ('bio3d', '2.2-4', local_ext_options), + ('AUC', '0.3.0', local_ext_options), + ('interpretR', '0.2.3', local_ext_options), + ('SuperLearner', '2.0-15', local_ext_options), + ('lpSolve', '5.6.13', local_ext_options), + ('mediation', '4.4.5', local_ext_options), + ('caret', '6.0-64', local_ext_options), + ('adabag', '4.1', local_ext_options), + ('parallelMap', '1.3', local_ext_options), + ('ParamHelpers', '1.6', local_ext_options), + ('ggvis', '0.4.2', local_ext_options), + ('mlr', '2.7', local_ext_options), + ('unbalanced', '2.0', local_ext_options), + ('RSNNS', '0.4-7', local_ext_options), + ('abc.data', '1.0', local_ext_options), + ('abc', '2.1', local_ext_options), + ('lhs', '0.10', local_ext_options), + ('tensorA', '0.36', local_ext_options), + ('EasyABC', '1.5', local_ext_options), + ('shape', '1.4.2', local_ext_options), + ('whisker', '0.3-2', local_ext_options), + ('rstudioapi', '0.4.0', local_ext_options), + ('roxygen2', '5.0.1', local_ext_options), + ('git2r', '0.13.1', local_ext_options), + ('xml2', '0.1.2', local_ext_options), + ('rversions', '1.0.2', local_ext_options), + ('devtools', '1.9.1', local_ext_options), + ('Rook', '1.1-1', local_ext_options), + ('rjson', '0.2.15', local_ext_options), + ('RMTstat', '0.3', local_ext_options), + ('Lmoments', '1.1-6', local_ext_options), + ('distillery', '1.0-2', local_ext_options), + ('extRemes', '2.0-7', local_ext_options), + ('pixmap', '0.4-11', local_ext_options), + ('pixmap', '0.4-11', local_ext_options), + ('tkrplot', '0.0-23', local_ext_options), + ('misc3d', '0.8-4', local_ext_options), + ('multicool', '0.1-9', local_ext_options), + ('ks', '1.10.1', local_ext_options), + ('logcondens', '2.1.4', local_ext_options), + ('Iso', '0.0-17', local_ext_options), + ('penalized', '0.9-45', local_ext_options), + ('coin', '1.1-2', local_ext_options), + ('clusterRepro', '0.5-1.1', local_ext_options), + ('randomForestSRC', '2.0.7', local_ext_options), + ('sm', '2.2-5.4', local_ext_options), + ('psych', '1.5.8', local_ext_options), + ('pbivnorm', '0.6.0', local_ext_options), + ('lavaan', '0.5-20', local_ext_options), + ('matrixcalc', '1.0-3', local_ext_options), + ('arm', '1.8-6', local_ext_options), + ('mi', '1.0', local_ext_options), + ('htmlwidgets', '0.6', local_ext_options), + ('visNetwork', '0.2.1', local_ext_options), + ('DiagrammeR', '0.8.2', local_ext_options), + ('sem', '3.1-6', local_ext_options), + ('jpeg', '0.1-8', local_ext_options), + ('sna', '2.3-2', local_ext_options), + ('glasso', '1.8', local_ext_options), + ('huge', '1.2.7', local_ext_options), + ('d3Network', '0.5.2.1', local_ext_options), + ('ggm', '2.3', local_ext_options), + ('qgraph', '1.3.2', local_ext_options), + ('diveRsity', '1.9.89', local_ext_options), + ('doSNOW', '1.0.14', local_ext_options), + ('phangorn', '2.0.2', local_ext_options), ] moduleclass = 'lang' diff --git a/ARCHIVE/r/R/R-3.2.3-foss-2016a.eb b/ARCHIVE/r/R/R-3.2.3-foss-2016a.eb index 37ad5560..3148c9ce 100644 --- a/ARCHIVE/r/R/R-3.2.3-foss-2016a.eb +++ b/ARCHIVE/r/R/R-3.2.3-foss-2016a.eb @@ -30,8 +30,8 @@ dependencies = [ ('PROJ', '4.9.2'), # for rgdal ] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -39,7 +39,7 @@ ext_options = { # mirror alternative for current packages 'http://cran.freestatistics.org/src/contrib', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } @@ -59,390 +59,390 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.6-5', ext_options), - ('abind', '1.4-3', ext_options), - ('magic', '1.5-6', ext_options), - ('geometry', '0.3-6', ext_options), - ('bit', '1.1-12', ext_options), - ('filehash', '2.3', ext_options), - ('ff', '2.2-13', ext_options), - ('bnlearn', '3.9', ext_options), - ('bootstrap', '2015.2', ext_options), - ('combinat', '0.0-8', ext_options), - ('deal', '1.2-37', ext_options), - ('fdrtool', '1.2.15', ext_options), - ('formatR', '1.2.1', ext_options), - ('gtools', '3.5.0', ext_options), - ('gdata', '2.17.0', ext_options), - ('GSA', '1.03', ext_options), - ('highr', '0.5.1', ext_options), - ('infotheo', '1.2.0', ext_options), - ('lars', '1.2', ext_options), - ('lazy', '1.2-15', ext_options), - ('kernlab', '0.9-22', ext_options), - ('mime', '0.4', ext_options), - ('markdown', '0.7.7', ext_options), - ('mlbench', '2.1-1', ext_options), - ('NLP', '0.1-8', ext_options), - ('mclust', '5.1', ext_options), - ('RANN', '2.5', ext_options), - ('rmeta', '2.16', ext_options), - ('segmented', '0.5-1.4', ext_options), - ('som', '0.3-5', ext_options), - ('SuppDists', '1.1-9.1', ext_options), - ('stabledist', '0.7-0', ext_options), - ('survivalROC', '1.0.3', ext_options), - ('pspline', '1.0-17', ext_options), - ('timeDate', '3012.100', ext_options), - ('longmemo', '1.0-0', ext_options), - ('ADGofTest', '0.3', ext_options), - ('ade4', '1.7-3', ext_options), - ('AlgDesign', '1.1-7.3', ext_options), - ('base64enc', '0.1-3', ext_options), - ('BH', '1.60.0-1', ext_options), - ('brew', '1.0-6', ext_options), - ('Brobdingnag', '1.2-4', ext_options), - ('corpcor', '1.6.8', ext_options), - ('longitudinal', '1.1.12', ext_options), - ('checkmate', '1.6.3', ext_options), - ('cubature', '1.1-2', ext_options), - ('DEoptimR', '1.0-4', ext_options), - ('digest', '0.6.8', ext_options), - ('fastmatch', '1.0-4', ext_options), - ('ffbase', '0.12.1', ext_options), - ('iterators', '1.0.8', ext_options), - ('maps', '3.0.2', ext_options), - ('nnls', '1.4', ext_options), - ('sendmailR', '1.2-1', ext_options), - ('spam', '1.3-0', ext_options), - ('subplex', '1.1-6', ext_options), - ('stringi', '1.0-1', ext_options), - ('magrittr', '1.5', ext_options), - ('stringr', '1.0.0', ext_options), - ('evaluate', '0.8', ext_options), - ('logspline', '2.1.8', ext_options), - ('ncbit', '2013.03.29', ext_options), - ('permute', '0.8-4', ext_options), - ('plotrix', '3.6-1', ext_options), - ('randomForest', '4.6-12', ext_options), - ('scatterplot3d', '0.3-36', ext_options), - ('SparseM', '1.7', ext_options), - ('tripack', '1.3-7', ext_options), - ('irace', '1.07', ext_options), - ('rJava', '0.9-7', ext_options), - ('lattice', '0.20-33', ext_options), - ('RColorBrewer', '1.1-2', ext_options), - ('latticeExtra', '0.6-26', ext_options), - ('Matrix', '1.2-3', ext_options), - ('png', '0.1-7', ext_options), - ('Rcpp', '0.12.2', ext_options), - ('RcppArmadillo', '0.6.400.2.2', ext_options), - ('plyr', '1.8.3', ext_options), - ('pROC', '1.8', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2014.10-1', ext_options), - ('BBmisc', '1.9', ext_options), - ('fail', '1.3', ext_options), - ('rlecuyer', '0.3-4', ext_options), - ('snow', '0.4-1', ext_options), - ('MASS', '7.3-45', ext_options), - ('tree', '1.0-36', ext_options), - ('pls', '2.5-0', ext_options), - ('class', '7.3-14', ext_options), - ('e1071', '1.6-7', ext_options), - ('nnet', '7.3-11', ext_options), - ('nlme', '3.1-122', ext_options), - ('minqa', '1.2.4', ext_options), - ('RcppEigen', '0.3.2.5.1', ext_options), - ('MatrixModels', '0.4-1', ext_options), - ('quantreg', '5.19', ext_options), - ('mgcv', '1.8-10', ext_options), - ('colorspace', '1.2-6', ext_options), - ('robustbase', '0.92-5', ext_options), - ('sp', '1.2-1', ext_options), - ('zoo', '1.7-12', ext_options), - ('lmtest', '0.9-34', ext_options), - ('vcd', '1.4-1', ext_options), - ('snowfall', '1.84-6.1', ext_options), - ('rpart', '4.1-10', ext_options), - ('survival', '2.38-3', ext_options), - ('mice', '2.25', ext_options), - ('urca', '1.2-8', ext_options), - ('fracdiff', '1.4-2', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-12', ext_options), - ('bitops', '1.0-6', ext_options), - ('boot', '1.3-17', ext_options), - ('mixtools', '1.0.3', ext_options), - ('cluster', '2.0.3', ext_options), - ('gclus', '1.3.1', ext_options), - ('coda', '0.18-1', ext_options), - ('codetools', '0.2-14', ext_options), - ('foreach', '1.4.3', ext_options), - ('doMC', '1.3.4', ext_options), - ('DBI', '0.3.1', ext_options), - ('foreign', '0.8-66', ext_options), - ('gam', '1.12', ext_options), - ('gamlss.data', '4.3-2', ext_options), - ('gamlss.dist', '4.3-5', ext_options), - ('hwriter', '1.3.2', ext_options), - ('KernSmooth', '2.23-15', ext_options), - ('xts', '0.9-7', ext_options), - ('TTR', '0.23-0', ext_options), - ('quantmod', '0.4-5', ext_options), - ('mnormt', '1.5-3', ext_options), - ('mvtnorm', '1.0-3', ext_options), - ('pcaPP', '1.9-60', ext_options), - ('numDeriv', '2014.2-1', ext_options), - ('lava', '1.4.1', ext_options), - ('prodlim', '1.5.7', ext_options), - ('pscl', '1.4.9', ext_options), - ('RSQLite', '1.0.0', ext_options), - ('BatchJobs', '1.6', ext_options), - ('sandwich', '2.3-4', ext_options), - ('sfsmisc', '1.0-28', ext_options), - ('spatial', '7.3-11', ext_options), - ('VGAM', '1.0-0', ext_options), - ('waveslim', '1.7.5', ext_options), - ('xtable', '1.8-0', ext_options), - ('profileModel', '0.5-9', ext_options), - ('brglm', '0.5-9', ext_options), - ('deSolve', '1.12', ext_options), - ('tseriesChaos', '0.1-13', ext_options), - ('tseries', '0.10-34', ext_options), - ('fastICA', '1.2-0', ext_options), - ('R.methodsS3', '1.7.0', ext_options), - ('R.oo', '1.19.0', ext_options), - ('cgdsr', '1.2.5', ext_options), - ('R.utils', '2.2.0', ext_options), - ('R.matlab', '3.3.0', ext_options), - ('gbm', '2.1.1', ext_options), - ('dichromat', '2.0-0', ext_options), - ('Formula', '1.2-1', ext_options), - ('acepack', '1.3-3.3', ext_options), - ('reshape2', '1.4.1', ext_options), - ('gtable', '0.1.2', ext_options), - ('munsell', '0.4.2', ext_options), - ('labeling', '0.3', ext_options), - ('scales', '0.3.0', ext_options), - ('proto', '0.3-10', ext_options), - ('ggplot2', '2.0.0', ext_options), - ('gridExtra', '2.0.0', ext_options), - ('Hmisc', '3.17-1', ext_options), - ('fastcluster', '1.1.16', ext_options), - ('chron', '2.3-47', ext_options), - ('data.table', '1.9.6', ext_options), - ('registry', '0.3', ext_options), - ('pkgmaker', '0.22', ext_options), - ('rngtools', '1.2.4', ext_options), - ('doParallel', '1.0.10', ext_options), - ('gridBase', '0.4-7', ext_options), - ('NMF', '0.20.6', ext_options), - ('irlba', '2.0.0', ext_options), - ('igraph', '1.0.1', ext_options), - ('GeneNet', '1.2.13', ext_options), - ('ape', '3.4', ext_options), - ('htmltools', '0.3', ext_options), - ('RJSONIO', '1.3-0', ext_options), - ('caTools', '1.17.1', ext_options), - ('gplots', '2.17.0', ext_options), - ('ROCR', '1.0-7', ext_options), - ('httpuv', '1.3.3', ext_options), - ('R6', '2.1.1', ext_options), - ('jsonlite', '0.9.19', ext_options), - ('rjson', '0.2.15', ext_options), - ('shiny', '0.12.2', ext_options), - ('seqinr', '3.1-3', ext_options), - ('LearnBayes', '2.15', ext_options), - ('deldir', '0.1-9', ext_options), - ('spdep', '0.5-92', ext_options), - ('assertthat', '0.1', ext_options), - ('lazyeval', '0.1.10', ext_options), - ('dplyr', '0.4.3', ext_options), - ('adegenet', '2.0.0', ext_options), - ('rncl', '0.6.0', ext_options), - ('XML', '3.98-1.3', ext_options), - ('memoise', '0.2.1', ext_options), - ('crayon', '1.3.1', ext_options), - ('praise', '1.0.0', ext_options), - ('testthat', '0.11.0', 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local_ext_options), + ('goftest', '1.0-3', local_ext_options), + ('spatstat', '1.44-1', local_ext_options), + ('rgdal', '1.1-3', local_ext_options), + ('gdalUtils', '2.0.1.7', local_ext_options), + ('pracma', '1.8.8', local_ext_options), + ('RCurl', '1.95-4.7', local_ext_options), + ('bio3d', '2.2-4', local_ext_options), + ('AUC', '0.3.0', local_ext_options), + ('interpretR', '0.2.3', local_ext_options), + ('SuperLearner', '2.0-15', local_ext_options), + ('lpSolve', '5.6.13', local_ext_options), + ('mediation', '4.4.5', local_ext_options), + ('caret', '6.0-64', local_ext_options), + ('adabag', '4.1', local_ext_options), + ('parallelMap', '1.3', local_ext_options), + ('ParamHelpers', '1.6', local_ext_options), + ('ggvis', '0.4.2', local_ext_options), + ('mlr', '2.7', local_ext_options), + ('unbalanced', '2.0', local_ext_options), + ('RSNNS', '0.4-7', local_ext_options), + ('abc.data', '1.0', local_ext_options), + ('abc', '2.1', local_ext_options), + ('lhs', '0.10', local_ext_options), + ('tensorA', '0.36', local_ext_options), + ('EasyABC', '1.5', local_ext_options), + ('shape', '1.4.2', local_ext_options), + ('whisker', '0.3-2', local_ext_options), + ('rstudioapi', '0.4.0', local_ext_options), + ('roxygen2', '5.0.1', local_ext_options), + ('git2r', '0.13.1', local_ext_options), + ('xml2', '0.1.2', local_ext_options), + ('rversions', '1.0.2', local_ext_options), + ('devtools', '1.9.1', local_ext_options), + ('Rook', '1.1-1', local_ext_options), + ('rjson', '0.2.15', local_ext_options), + ('Cairo', '1.5-9', local_ext_options), + ('RMTstat', '0.3', local_ext_options), + ('Lmoments', '1.1-6', local_ext_options), + ('distillery', '1.0-2', local_ext_options), + ('extRemes', '2.0-7', local_ext_options), + ('pixmap', '0.4-11', local_ext_options), + ('tkrplot', '0.0-23', local_ext_options), + ('misc3d', '0.8-4', local_ext_options), + ('multicool', '0.1-9', local_ext_options), + ('ks', '1.10.1', local_ext_options), + ('logcondens', '2.1.4', local_ext_options), + ('Iso', '0.0-17', local_ext_options), + ('penalized', '0.9-45', local_ext_options), + ('coin', '1.1-2', local_ext_options), + ('clusterRepro', '0.5-1.1', local_ext_options), + ('randomForestSRC', '2.0.7', local_ext_options), + ('sm', '2.2-5.4', local_ext_options), + ('psych', '1.5.8', local_ext_options), + ('pbivnorm', '0.6.0', local_ext_options), + ('lavaan', '0.5-20', local_ext_options), + ('matrixcalc', '1.0-3', local_ext_options), + ('arm', '1.8-6', local_ext_options), + ('mi', '1.0', local_ext_options), + ('htmlwidgets', '0.6', local_ext_options), + ('visNetwork', '0.2.1', local_ext_options), + ('DiagrammeR', '0.8.2', local_ext_options), + ('sem', '3.1-6', local_ext_options), + ('jpeg', '0.1-8', local_ext_options), + ('sna', '2.3-2', local_ext_options), + ('glasso', '1.8', local_ext_options), + ('huge', '1.2.7', local_ext_options), + ('d3Network', '0.5.2.1', local_ext_options), + ('ggm', '2.3', local_ext_options), + ('qgraph', '1.3.2', local_ext_options), + ('diveRsity', '1.9.89', local_ext_options), + ('doSNOW', '1.0.14', local_ext_options), + ('phangorn', '2.0.2', local_ext_options), ] moduleclass = 'lang' diff --git a/ARCHIVE/r/R/R-3.2.3-foss-2016b.eb b/ARCHIVE/r/R/R-3.2.3-foss-2016b.eb index c103dfc1..0152fc94 100644 --- a/ARCHIVE/r/R/R-3.2.3-foss-2016b.eb +++ b/ARCHIVE/r/R/R-3.2.3-foss-2016b.eb @@ -31,8 +31,8 @@ dependencies = [ ('GMP', '6.1.1'), # for igraph ] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -40,7 +40,7 @@ ext_options = { # mirror alternative for current packages 'http://cran.freestatistics.org/src/contrib', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } @@ -60,394 +60,394 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.6-5', ext_options), - ('abind', '1.4-3', ext_options), - ('magic', '1.5-6', ext_options), - ('geometry', '0.3-6', ext_options), - ('bit', '1.1-12', ext_options), - ('filehash', '2.3', ext_options), - ('ff', '2.2-13', ext_options), - ('bnlearn', '3.9', ext_options), - ('bootstrap', '2015.2', ext_options), - ('combinat', '0.0-8', ext_options), - ('deal', '1.2-37', ext_options), - ('fdrtool', '1.2.15', ext_options), - ('formatR', '1.2.1', ext_options), - ('gtools', '3.5.0', ext_options), - ('gdata', '2.17.0', ext_options), - ('GSA', '1.03', ext_options), - ('highr', '0.5.1', ext_options), - ('infotheo', '1.2.0', ext_options), - ('lars', '1.2', ext_options), - ('lazy', '1.2-15', ext_options), - ('kernlab', '0.9-22', ext_options), - ('mime', '0.4', ext_options), - ('markdown', '0.7.7', ext_options), - ('mlbench', '2.1-1', ext_options), - ('NLP', '0.1-8', ext_options), - ('mclust', '5.1', ext_options), - ('RANN', '2.5', ext_options), - ('rmeta', '2.16', ext_options), - ('segmented', '0.5-1.4', ext_options), - ('som', '0.3-5', ext_options), - ('SuppDists', '1.1-9.1', ext_options), - ('stabledist', '0.7-0', ext_options), - ('survivalROC', '1.0.3', ext_options), - ('pspline', '1.0-17', ext_options), - ('timeDate', '3012.100', ext_options), - ('longmemo', '1.0-0', ext_options), - ('ADGofTest', '0.3', ext_options), - ('ade4', '1.7-3', ext_options), - ('AlgDesign', '1.1-7.3', ext_options), - ('base64enc', '0.1-3', ext_options), - ('BH', '1.60.0-1', ext_options), - ('brew', '1.0-6', ext_options), - ('Brobdingnag', '1.2-4', ext_options), - ('corpcor', '1.6.8', ext_options), - ('longitudinal', '1.1.12', ext_options), - ('checkmate', '1.6.3', ext_options), - ('cubature', '1.1-2', ext_options), - ('DEoptimR', '1.0-4', ext_options), - ('digest', '0.6.8', ext_options), - ('fastmatch', '1.0-4', ext_options), - ('ffbase', '0.12.1', ext_options), - ('iterators', '1.0.8', ext_options), - ('maps', '3.0.2', ext_options), - ('nnls', '1.4', ext_options), - ('sendmailR', '1.2-1', ext_options), - ('spam', '1.3-0', ext_options), - ('subplex', '1.1-6', ext_options), - ('stringi', '1.0-1', ext_options), - ('magrittr', '1.5', ext_options), - ('stringr', '1.0.0', ext_options), - ('evaluate', '0.8', ext_options), - ('logspline', '2.1.8', ext_options), - ('ncbit', '2013.03.29', ext_options), - ('permute', '0.8-4', ext_options), - ('plotrix', '3.6-1', ext_options), - ('randomForest', '4.6-12', ext_options), - ('scatterplot3d', '0.3-36', ext_options), - ('SparseM', '1.7', ext_options), - ('tripack', '1.3-7', ext_options), - ('irace', '1.07', ext_options), - ('rJava', '0.9-7', ext_options), - ('lattice', '0.20-33', ext_options), - ('RColorBrewer', '1.1-2', ext_options), - ('latticeExtra', '0.6-26', ext_options), - ('Matrix', '1.2-3', ext_options), - ('png', '0.1-7', ext_options), - ('Rcpp', '0.12.2', ext_options), - ('RcppArmadillo', '0.6.400.2.2', ext_options), - ('plyr', '1.8.3', ext_options), - ('pROC', '1.8', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2014.10-1', ext_options), - ('BBmisc', '1.9', ext_options), - ('fail', '1.3', ext_options), - ('rlecuyer', '0.3-4', ext_options), - ('snow', '0.4-1', ext_options), - ('MASS', '7.3-45', ext_options), - ('tree', '1.0-36', ext_options), - ('pls', '2.5-0', ext_options), - ('class', '7.3-14', ext_options), - ('e1071', '1.6-7', ext_options), - ('nnet', '7.3-11', ext_options), - ('nlme', '3.1-122', ext_options), - ('minqa', '1.2.4', ext_options), - ('RcppEigen', '0.3.2.5.1', ext_options), - ('MatrixModels', '0.4-1', ext_options), - ('quantreg', '5.19', ext_options), - ('mgcv', '1.8-10', ext_options), - ('colorspace', '1.2-6', ext_options), - ('robustbase', '0.92-5', ext_options), - ('sp', '1.2-1', ext_options), - ('zoo', '1.7-12', ext_options), - ('lmtest', '0.9-34', ext_options), - ('vcd', '1.4-1', ext_options), - ('snowfall', '1.84-6.1', ext_options), - ('rpart', '4.1-10', ext_options), - ('survival', '2.38-3', ext_options), - ('mice', '2.25', ext_options), - ('urca', '1.2-8', ext_options), - ('fracdiff', '1.4-2', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-12', ext_options), - ('bitops', '1.0-6', ext_options), - ('boot', '1.3-17', ext_options), - ('mixtools', '1.0.3', ext_options), - ('cluster', '2.0.3', ext_options), - ('gclus', '1.3.1', ext_options), - ('coda', '0.18-1', ext_options), - ('codetools', '0.2-14', ext_options), - ('foreach', '1.4.3', ext_options), - ('doMC', '1.3.4', ext_options), - ('DBI', '0.3.1', ext_options), - ('foreign', '0.8-66', ext_options), - ('gam', '1.12', ext_options), - ('gamlss.data', '4.3-2', ext_options), - ('gamlss.dist', '4.3-5', ext_options), - ('hwriter', '1.3.2', ext_options), - ('KernSmooth', '2.23-15', ext_options), - ('xts', '0.9-7', ext_options), - ('TTR', '0.23-0', ext_options), - ('quantmod', '0.4-5', ext_options), - ('mnormt', '1.5-3', ext_options), - ('mvtnorm', '1.0-3', ext_options), - ('pcaPP', '1.9-60', ext_options), - ('numDeriv', '2014.2-1', ext_options), - ('lava', '1.4.1', ext_options), - ('prodlim', '1.5.7', ext_options), - ('pscl', '1.4.9', ext_options), - ('RSQLite', '1.0.0', ext_options), - ('BatchJobs', '1.6', ext_options), - ('sandwich', '2.3-4', ext_options), - ('sfsmisc', '1.0-28', ext_options), - ('spatial', '7.3-11', ext_options), - ('VGAM', '1.0-0', ext_options), - ('waveslim', '1.7.5', ext_options), - ('xtable', '1.8-0', ext_options), - ('profileModel', '0.5-9', ext_options), - ('brglm', '0.5-9', ext_options), - ('deSolve', '1.12', ext_options), - ('tseriesChaos', '0.1-13', ext_options), - ('tseries', '0.10-34', ext_options), - ('fastICA', '1.2-0', ext_options), - ('R.methodsS3', '1.7.0', ext_options), - ('R.oo', '1.19.0', ext_options), - ('cgdsr', '1.2.5', ext_options), - ('R.utils', '2.2.0', ext_options), - ('R.matlab', '3.3.0', ext_options), - ('gbm', '2.1.1', ext_options), - ('dichromat', '2.0-0', ext_options), - ('Formula', '1.2-1', ext_options), - ('acepack', '1.3-3.3', ext_options), - ('reshape2', '1.4.1', ext_options), - ('gtable', '0.1.2', ext_options), - ('munsell', '0.4.2', ext_options), - ('labeling', '0.3', ext_options), - ('scales', '0.3.0', ext_options), - ('proto', '0.3-10', ext_options), - ('ggplot2', '2.0.0', ext_options), - ('gridExtra', '2.0.0', ext_options), - ('Hmisc', '3.17-1', ext_options), - ('fastcluster', '1.1.16', ext_options), - ('chron', '2.3-47', ext_options), - ('data.table', '1.9.6', ext_options), - ('registry', '0.3', ext_options), - ('pkgmaker', '0.22', ext_options), - ('rngtools', '1.2.4', ext_options), - ('doParallel', '1.0.10', ext_options), - ('gridBase', '0.4-7', ext_options), - ('NMF', '0.20.6', ext_options), - ('irlba', '2.0.0', ext_options), - ('igraph', '1.0.1', ext_options), - ('GeneNet', '1.2.13', ext_options), - ('ape', '3.4', ext_options), - ('htmltools', '0.3', ext_options), - ('RJSONIO', '1.3-0', ext_options), - ('caTools', '1.17.1', ext_options), - ('gplots', '2.17.0', ext_options), - ('ROCR', '1.0-7', ext_options), - ('httpuv', '1.3.3', ext_options), - ('R6', '2.1.1', ext_options), - ('jsonlite', '0.9.19', ext_options), - ('rjson', '0.2.15', ext_options), - ('shiny', '0.12.2', ext_options), - ('seqinr', '3.1-3', ext_options), - ('LearnBayes', '2.15', ext_options), - ('deldir', '0.1-9', ext_options), - ('spdep', '0.5-92', ext_options), - ('assertthat', '0.1', ext_options), - ('lazyeval', '0.1.10', ext_options), - ('dplyr', '0.4.3', ext_options), - ('adegenet', '2.0.0', ext_options), - ('rncl', '0.6.0', ext_options), - ('XML', '3.98-1.3', ext_options), - ('memoise', '0.2.1', ext_options), - ('crayon', '1.3.1', ext_options), - ('praise', '1.0.0', ext_options), - ('testthat', '0.11.0', ext_options), - ('yaml', '2.1.13', ext_options), - ('knitr', '1.11', ext_options), - ('rmarkdown', '0.9.2', ext_options), - ('curl', '0.9.4', ext_options), - ('httr', '1.0.0', ext_options), - ('reshape', '0.8.5', ext_options), - ('bold', '0.3.0', ext_options), - ('taxize', '0.7.0', ext_options), - ('tidyr', '0.3.1', ext_options), - ('uuid', '0.1-2', ext_options), - ('RNeXML', '2.0.5', ext_options), - ('phylobase', '0.8.0', ext_options), - ('adephylo', '1.1-6', ext_options), - ('animation', '2.4', ext_options), - ('bigmemory.sri', '0.1.3', ext_options), - ('bigmemory', '4.5.8', ext_options), - ('calibrate', '1.7.2', ext_options), - ('clusterGeneration', '1.3.4', ext_options), - ('raster', '2.5-2', ext_options), - ('dismo', '1.0-12', ext_options), - ('expm', '0.999-0', ext_options), - ('extrafontdb', '1.0', ext_options), - ('Rttf2pt1', '1.3.3', ext_options), - ('extrafont', '0.17', ext_options), - ('fields', '8.3-6', ext_options), - ('shapefiles', '0.7', ext_options), - ('fossil', '0.3.7', ext_options), - ('geiger', '2.0.6', ext_options), - ('glmnet', '2.0-2', ext_options), - ('rgl', '0.95.1441', ext_options), - ('labdsv', '1.7-0', ext_options), - ('stabs', '0.5-1', ext_options), - ('mboost', '2.5-0', ext_options), - ('msm', '1.6', ext_options), - ('nor1mix', '1.2-1', ext_options), - ('np', '0.60-2', ext_options), - ('polynom', '1.3-8', ext_options), - ('polspline', '1.1.12', ext_options), - ('TH.data', '1.0-6', ext_options), - ('multlocal_comp', '1.4-1', ext_options), - ('rms', '4.4-1', ext_options), - ('RWekajars', '3.7.12-1', ext_options), - ('RWeka', '0.4-24', ext_options), - ('slam', '0.1-32', ext_options), - ('tm', '0.6-2', ext_options), - ('TraMineR', '1.8-11', ext_options), - ('chemometrics', '1.3.9', ext_options), - ('FNN', '1.1', ext_options), - ('ipred', '0.9-5', ext_options), - ('statmod', '1.4.23', ext_options), - ('miscTools', '0.6-16', ext_options), - ('maxLik', '1.3-4', ext_options), - ('mlogit', '0.2-4', ext_options), - ('getopt', '1.20.0', ext_options), - ('gsalib', '2.1', ext_options), - ('optparse', '1.3.2', ext_options), - ('klaR', '0.6-12', ext_options), - ('neuRosim', '0.2-12', ext_options), - ('locfit', '1.5-9.1', ext_options), - ('GGally', '1.0.0', ext_options), - ('beanplot', '1.2', ext_options), - ('clValid', '0.6-6', ext_options), - ('matrixStats', '0.50.1', ext_options), - ('DiscriMiner', '0.1-29', ext_options), - ('ellipse', '0.3-8', ext_options), - ('leaps', 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('xml2', '0.1.2', local_ext_options), + ('rversions', '1.0.2', local_ext_options), + ('devtools', '1.9.1', local_ext_options), + ('Rook', '1.1-1', local_ext_options), + ('rjson', '0.2.15', local_ext_options), + ('Cairo', '1.5-9', local_ext_options), + ('RMTstat', '0.3', local_ext_options), + ('Lmoments', '1.1-6', local_ext_options), + ('distillery', '1.0-2', local_ext_options), + ('extRemes', '2.0-7', local_ext_options), + ('pixmap', '0.4-11', local_ext_options), + ('tkrplot', '0.0-23', local_ext_options), + ('misc3d', '0.8-4', local_ext_options), + ('multicool', '0.1-9', local_ext_options), + ('ks', '1.10.1', local_ext_options), + ('logcondens', '2.1.4', local_ext_options), + ('Iso', '0.0-17', local_ext_options), + ('penalized', '0.9-45', local_ext_options), + ('coin', '1.1-2', local_ext_options), + ('clusterRepro', '0.5-1.1', local_ext_options), + ('randomForestSRC', '2.0.7', local_ext_options), + ('sm', '2.2-5.4', local_ext_options), + ('psych', '1.5.8', local_ext_options), + ('pbivnorm', '0.6.0', local_ext_options), + ('lavaan', '0.5-20', local_ext_options), + ('matrixcalc', '1.0-3', local_ext_options), + ('arm', '1.8-6', local_ext_options), + ('mi', '1.0', local_ext_options), + ('htmlwidgets', '0.6', local_ext_options), + ('visNetwork', '0.2.1', local_ext_options), + ('DiagrammeR', '0.8.2', local_ext_options), + ('sem', '3.1-6', local_ext_options), + ('jpeg', '0.1-8', local_ext_options), + ('sna', '2.3-2', local_ext_options), + ('glasso', '1.8', local_ext_options), + ('huge', '1.2.7', local_ext_options), + ('d3Network', '0.5.2.1', local_ext_options), + ('ggm', '2.3', local_ext_options), + ('qgraph', '1.3.2', local_ext_options), + ('diveRsity', '1.9.89', local_ext_options), + ('doSNOW', '1.0.14', local_ext_options), + ('phangorn', '2.0.2', local_ext_options), + ('geepack', '1.2-0.1', local_ext_options), + ('lubridate', '1.5.6', local_ext_options), + ('biom', '0.3.12', local_ext_options), + ('pim', '2.0.0.2', local_ext_options), ] moduleclass = 'lang' diff --git a/ARCHIVE/r/R/R-3.3.1-foss-2016a.eb b/ARCHIVE/r/R/R-3.3.1-foss-2016a.eb index a41fe41e..19d5d0db 100644 --- a/ARCHIVE/r/R/R-3.3.1-foss-2016a.eb +++ b/ARCHIVE/r/R/R-3.3.1-foss-2016a.eb @@ -42,8 +42,8 @@ dependencies = [ osdependencies = [('openssl-devel', 'libssl-dev', 'libopenssl-devel')] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -51,7 +51,7 @@ ext_options = { # mirror alternative for current packages 'http://cran.freestatistics.org/src/contrib', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } @@ -71,409 +71,409 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.6-6', ext_options), - ('abind', '1.4-3', ext_options), - ('magic', '1.5-6', ext_options), - ('geometry', '0.3-6', ext_options), - ('bit', '1.1-12', ext_options), - ('filehash', '2.3', ext_options), - ('ff', '2.2-13', ext_options), - ('bnlearn', '4.0', ext_options), - ('bootstrap', '2015.2', ext_options), - ('combinat', '0.0-8', ext_options), - ('deal', '1.2-37', ext_options), - ('fdrtool', '1.2.15', ext_options), - ('formatR', '1.4', ext_options), - ('gtools', '3.5.0', ext_options), - ('gdata', '2.17.0', ext_options), - ('GSA', '1.03', ext_options), - ('highr', '0.6', ext_options), - ('infotheo', '1.2.0', ext_options), - ('lars', '1.2', ext_options), - ('lazy', '1.2-15', ext_options), - ('kernlab', '0.9-24', ext_options), - ('mime', '0.5', ext_options), - ('markdown', '0.7.7', ext_options), - ('mlbench', '2.1-1', ext_options), - ('NLP', '0.1-9', ext_options), - ('mclust', '5.2', ext_options), - ('RANN', '2.5', ext_options), - ('rmeta', '2.16', ext_options), - ('segmented', '0.5-1.4', ext_options), - ('som', '0.3-5.1', ext_options), - ('SuppDists', '1.1-9.2', ext_options), - ('stabledist', '0.7-0', ext_options), - ('survivalROC', '1.0.3', ext_options), - ('pspline', '1.0-17', ext_options), - ('timeDate', '3012.100', ext_options), - ('longmemo', '1.0-0', ext_options), - ('ADGofTest', '0.3', ext_options), - ('ade4', '1.7-4', ext_options), - ('AlgDesign', '1.1-7.3', ext_options), - ('base64enc', '0.1-3', ext_options), - ('BH', '1.60.0-2', ext_options), - ('brew', '1.0-6', ext_options), - ('Brobdingnag', '1.2-4', ext_options), - ('corpcor', '1.6.8', ext_options), - ('longitudinal', '1.1.12', ext_options), - ('backports', '1.0.3', ext_options), - ('checkmate', '1.8.1', ext_options), - ('cubature', '1.1-2', ext_options), - ('DEoptimR', '1.0-6', ext_options), - ('digest', '0.6.9', ext_options), - ('fastmatch', '1.0-4', ext_options), - ('ffbase', '0.12.3', ext_options), - ('iterators', '1.0.8', ext_options), - ('maps', '3.1.0', ext_options), - ('nnls', '1.4', ext_options), - ('sendmailR', '1.2-1', ext_options), - ('spam', '1.3-0', ext_options), - ('subplex', '1.1-6', ext_options), - ('stringi', '1.1.1', ext_options), - 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ext_options), - ('snow', '0.4-1', ext_options), - ('MASS', '7.3-45', ext_options), - ('tree', '1.0-37', ext_options), - ('pls', '2.5-0', ext_options), - ('class', '7.3-14', ext_options), - ('e1071', '1.6-7', ext_options), - ('nnet', '7.3-12', ext_options), - ('nlme', '3.1-128', ext_options), - ('minqa', '1.2.4', ext_options), - ('RcppEigen', '0.3.2.8.1', ext_options), - ('MatrixModels', '0.4-1', ext_options), - ('quantreg', '5.26', ext_options), - ('mgcv', '1.8-12', ext_options), - ('colorspace', '1.2-6', ext_options), - ('robustbase', '0.92-6', ext_options), - ('sp', '1.2-3', ext_options), - ('zoo', '1.7-13', ext_options), - ('lmtest', '0.9-34', ext_options), - ('vcd', '1.4-1', ext_options), - ('snowfall', '1.84-6.1', ext_options), - ('rpart', '4.1-10', ext_options), - ('survival', '2.39-5', ext_options), - ('mice', '2.25', ext_options), - ('urca', '1.2-9', ext_options), - ('fracdiff', '1.4-2', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-12', ext_options), - 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('rversions', '1.0.2', local_ext_options), + ('withr', '1.0.2', local_ext_options), + ('devtools', '1.12.0', local_ext_options), + ('Rook', '1.1-1', local_ext_options), + ('rjson', '0.2.15', local_ext_options), + ('Cairo', '1.5-9', local_ext_options), + ('RMTstat', '0.3', local_ext_options), + ('Lmoments', '1.2-3', local_ext_options), + ('distillery', '1.0-2', local_ext_options), + ('extRemes', '2.0-7', local_ext_options), + ('pixmap', '0.4-11', local_ext_options), + ('tkrplot', '0.0-23', local_ext_options), + ('misc3d', '0.8-4', local_ext_options), + ('multicool', '0.1-9', local_ext_options), + ('ks', '1.10.4', local_ext_options), + ('logcondens', '2.1.4', local_ext_options), + ('Iso', '0.0-17', local_ext_options), + ('penalized', '0.9-47', local_ext_options), + ('clusterRepro', '0.5-1.1', local_ext_options), + ('randomForestSRC', '2.2.0', local_ext_options), + ('sm', '2.2-5.4', local_ext_options), + ('psych', '1.6.6', local_ext_options), + ('pbivnorm', '0.6.0', local_ext_options), + ('lavaan', '0.5-20', local_ext_options), + ('matrixcalc', '1.0-3', local_ext_options), + ('arm', '1.8-6', local_ext_options), + ('mi', '1.0', local_ext_options), + ('htmlwidgets', '0.6', local_ext_options), + ('visNetwork', '1.0.1', local_ext_options), + ('DiagrammeR', '0.8.2', local_ext_options), + ('sem', '3.1-7', local_ext_options), + ('jpeg', '0.1-8', local_ext_options), + ('sna', '2.3-2', local_ext_options), + ('glasso', '1.8', local_ext_options), + ('huge', '1.2.7', local_ext_options), + ('d3Network', '0.5.2.1', local_ext_options), + ('ggm', '2.3', local_ext_options), + ('qgraph', '1.3.4', local_ext_options), + ('diveRsity', '1.9.89', local_ext_options), + ('doSNOW', '1.0.14', local_ext_options), + ('phangorn', '2.0.4', local_ext_options), + ('geepack', '1.2-0.2', local_ext_options), + ('lubridate', '1.5.6', local_ext_options), + ('biom', '0.3.12', local_ext_options), + ('pim', '2.0.0.2', local_ext_options), + ('minpack.lm', '1.2-1', local_ext_options), + ('rootSolve', '1.7', local_ext_options), + ('diagram', '1.6.3', local_ext_options), + ('FME', '1.3.5', local_ext_options), ] moduleclass = 'lang' diff --git a/ARCHIVE/r/R/R-3.3.1-foss-2016b.eb b/ARCHIVE/r/R/R-3.3.1-foss-2016b.eb index 9e54c00b..d5e26008 100644 --- a/ARCHIVE/r/R/R-3.3.1-foss-2016b.eb +++ b/ARCHIVE/r/R/R-3.3.1-foss-2016b.eb @@ -42,8 +42,8 @@ dependencies = [ osdependencies = [('openssl-devel', 'libssl-dev', 'libopenssl-devel')] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -51,7 +51,7 @@ ext_options = { # mirror alternative for current packages 'http://cran.freestatistics.org/src/contrib', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } @@ -71,409 +71,409 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.6-6', ext_options), - ('abind', '1.4-3', ext_options), - ('magic', '1.5-6', ext_options), - ('geometry', '0.3-6', ext_options), - ('bit', '1.1-12', ext_options), - ('filehash', '2.3', ext_options), - ('ff', '2.2-13', ext_options), - ('bnlearn', '4.0', ext_options), - ('bootstrap', '2015.2', ext_options), - ('combinat', '0.0-8', ext_options), - ('deal', '1.2-37', ext_options), - ('fdrtool', '1.2.15', ext_options), - ('formatR', '1.4', ext_options), - ('gtools', '3.5.0', ext_options), - ('gdata', '2.17.0', ext_options), - ('GSA', '1.03', ext_options), - ('highr', '0.6', ext_options), - ('infotheo', '1.2.0', ext_options), - ('lars', '1.2', ext_options), - ('lazy', '1.2-15', ext_options), - ('kernlab', '0.9-24', ext_options), - ('mime', '0.5', ext_options), - ('markdown', '0.7.7', ext_options), - ('mlbench', '2.1-1', ext_options), - ('NLP', '0.1-9', ext_options), - ('mclust', '5.2', ext_options), - ('RANN', '2.5', ext_options), - ('rmeta', '2.16', ext_options), - ('segmented', '0.5-1.4', ext_options), - ('som', '0.3-5.1', ext_options), - ('SuppDists', '1.1-9.2', ext_options), - ('stabledist', '0.7-0', ext_options), - ('survivalROC', '1.0.3', ext_options), - ('pspline', '1.0-17', ext_options), - ('timeDate', '3012.100', ext_options), - ('longmemo', '1.0-0', ext_options), - ('ADGofTest', '0.3', ext_options), - ('ade4', '1.7-4', ext_options), - ('AlgDesign', '1.1-7.3', ext_options), - ('base64enc', '0.1-3', ext_options), - ('BH', '1.60.0-2', ext_options), - ('brew', '1.0-6', ext_options), - ('Brobdingnag', '1.2-4', ext_options), - ('corpcor', '1.6.8', ext_options), - ('longitudinal', '1.1.12', ext_options), - ('backports', '1.0.3', ext_options), - ('checkmate', '1.8.1', ext_options), - ('cubature', '1.1-2', ext_options), - ('DEoptimR', '1.0-6', ext_options), - ('digest', '0.6.9', ext_options), - ('fastmatch', '1.0-4', ext_options), - ('ffbase', '0.12.3', ext_options), - ('iterators', '1.0.8', ext_options), - ('maps', '3.1.0', ext_options), - ('nnls', '1.4', ext_options), - ('sendmailR', '1.2-1', ext_options), - ('spam', '1.3-0', ext_options), - ('subplex', '1.1-6', ext_options), - ('stringi', '1.1.1', ext_options), - ('magrittr', '1.5', ext_options), - ('stringr', '1.0.0', ext_options), - ('evaluate', '0.9', ext_options), - ('logspline', '2.1.9', ext_options), - ('ncbit', '2013.03.29', ext_options), - ('permute', '0.9-0', ext_options), - ('plotrix', '3.6-2', ext_options), - ('randomForest', '4.6-12', ext_options), - ('scatterplot3d', '0.3-37', ext_options), - ('SparseM', '1.7', ext_options), - ('tripack', '1.3-7', ext_options), - ('irace', '1.07', ext_options), - ('rJava', '0.9-8', ext_options), - ('lattice', '0.20-33', ext_options), - ('RColorBrewer', '1.1-2', ext_options), - ('latticeExtra', '0.6-28', ext_options), - ('Matrix', '1.2-6', ext_options), - ('png', '0.1-7', ext_options), - ('Rcpp', '0.12.5', ext_options), - ('RcppArmadillo', '0.7.100.3.1', ext_options), - ('plyr', '1.8.4', ext_options), - ('pROC', '1.8', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2014.10-1', ext_options), - ('BBmisc', '1.9', ext_options), - ('fail', '1.3', ext_options), - ('rlecuyer', '0.3-4', ext_options), - ('snow', '0.4-1', ext_options), - ('MASS', '7.3-45', ext_options), - ('tree', '1.0-37', ext_options), - ('pls', '2.5-0', ext_options), - ('class', '7.3-14', ext_options), - ('e1071', '1.6-7', ext_options), - ('nnet', '7.3-12', ext_options), - ('nlme', '3.1-128', ext_options), - ('minqa', '1.2.4', ext_options), - ('RcppEigen', '0.3.2.8.1', ext_options), - ('MatrixModels', '0.4-1', ext_options), - ('quantreg', '5.26', ext_options), - ('mgcv', '1.8-12', ext_options), - ('colorspace', '1.2-6', ext_options), - ('robustbase', '0.92-6', ext_options), - ('sp', '1.2-3', ext_options), - ('zoo', '1.7-13', ext_options), - ('lmtest', '0.9-34', ext_options), - ('vcd', '1.4-1', ext_options), - ('snowfall', '1.84-6.1', ext_options), - ('rpart', '4.1-10', ext_options), - ('survival', '2.39-5', ext_options), - ('mice', '2.25', ext_options), - ('urca', '1.2-9', ext_options), - ('fracdiff', '1.4-2', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-12', ext_options), - ('bitops', '1.0-6', ext_options), - ('boot', '1.3-18', ext_options), - ('mixtools', '1.0.4', ext_options), - ('cluster', '2.0.4', ext_options), - ('gclus', '1.3.1', ext_options), - ('coda', '0.18-1', ext_options), - ('codetools', '0.2-14', ext_options), - ('foreach', '1.4.3', ext_options), - ('doMC', '1.3.4', ext_options), - ('DBI', '0.4-1', ext_options), - ('foreign', '0.8-66', ext_options), - ('gam', '1.12', ext_options), - ('gamlss.data', '4.3-4', ext_options), - ('gamlss.dist', '4.3-6', ext_options), - ('hwriter', '1.3.2', ext_options), - ('KernSmooth', '2.23-15', ext_options), - ('xts', '0.9-7', ext_options), - ('TTR', '0.23-1', ext_options), - ('quantmod', '0.4-5', ext_options), - ('mnormt', '1.5-4', ext_options), - ('mvtnorm', '1.0-5', ext_options), - ('pcaPP', '1.9-60', ext_options), - ('numDeriv', '2014.2-1', ext_options), - ('lava', '1.4.3', ext_options), - ('prodlim', '1.5.7', ext_options), - ('pscl', '1.4.9', ext_options), - ('RSQLite', '1.0.0', ext_options), - ('BatchJobs', '1.6', ext_options), - ('sandwich', '2.3-4', ext_options), - ('sfsmisc', '1.1-0', ext_options), - ('spatial', '7.3-11', ext_options), - ('VGAM', '1.0-2', ext_options), - ('waveslim', '1.7.5', ext_options), - ('xtable', '1.8-2', ext_options), - ('profileModel', '0.5-9', ext_options), - ('brglm', '0.5-9', ext_options), - ('deSolve', '1.13', ext_options), - ('tseriesChaos', '0.1-13', ext_options), - ('tseries', '0.10-35', ext_options), - ('fastICA', '1.2-0', ext_options), - ('R.methodsS3', '1.7.1', ext_options), - ('R.oo', '1.20.0', ext_options), - ('cgdsr', '1.2.5', ext_options), - ('R.utils', '2.3.0', ext_options), - ('R.matlab', '3.6.0', ext_options), - ('gbm', '2.1.1', ext_options), - ('dichromat', '2.0-0', ext_options), - ('Formula', '1.2-1', ext_options), - ('acepack', '1.3-3.3', ext_options), - ('reshape2', '1.4.1', ext_options), - ('gtable', '0.2.0', ext_options), - ('munsell', '0.4.3', ext_options), - ('labeling', '0.3', ext_options), - ('scales', '0.4.0', ext_options), - ('proto', '0.3-10', ext_options), - ('ggplot2', '2.1.0', ext_options), - ('gridExtra', '2.2.1', ext_options), - ('chron', '2.3-47', ext_options), - ('data.table', '1.9.6', ext_options), - ('Hmisc', '3.17-4', ext_options), - ('fastcluster', '1.1.20', ext_options), - ('registry', '0.3', ext_options), - ('pkgmaker', '0.22', ext_options), - ('rngtools', '1.2.4', ext_options), - ('doParallel', '1.0.10', ext_options), - ('gridBase', '0.4-7', ext_options), - ('NMF', '0.20.6', ext_options), - ('irlba', '2.0.0', ext_options), - ('igraph', '1.0.1', ext_options), - ('GeneNet', '1.2.13', ext_options), - ('ape', '3.5', ext_options), - ('htmltools', '0.3.5', ext_options), - ('RJSONIO', '1.3-0', ext_options), - ('caTools', '1.17.1', ext_options), - ('gplots', '3.0.1', ext_options), - ('ROCR', '1.0-7', ext_options), - ('httpuv', '1.3.3', ext_options), - ('R6', '2.1.2', 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local_ext_options), + ('pheatmap', '1.0.8', local_ext_options), + ('openxlsx', '3.0.0', local_ext_options), + ('pvclust', '2.0-0', local_ext_options), + ('RCircos', '1.1.3', local_ext_options), + ('lambda.r', '1.1.7', local_ext_options), + ('futile.options', '1.0.0', local_ext_options), + ('futile.logger', '1.4.1', local_ext_options), + ('VennDiagram', '1.6.17', local_ext_options), + ('xlsxjars', '0.6.1', local_ext_options), + ('xlsx', '0.5.7', local_ext_options), + ('forecast', '7.1', local_ext_options), + ('fma', '2.2', local_ext_options), + ('expsmooth', '2.3', local_ext_options), + ('fpp', '0.5', local_ext_options), + ('maptools', '0.8-39', local_ext_options), + ('deldir', '0.1-12', local_ext_options), + ('tensor', '1.5', local_ext_options), + ('polyclip', '1.5-6', local_ext_options), + ('goftest', '1.0-3', local_ext_options), + ('spatstat', '1.46-1', local_ext_options), + ('rgdal', '1.1-10', local_ext_options), + ('gdalUtils', '2.0.1.7', local_ext_options), + ('pracma', '1.9.3', local_ext_options), + ('RCurl', '1.95-4.8', local_ext_options), + ('bio3d', '2.2-4', local_ext_options), + ('AUC', '0.3.0', local_ext_options), + ('interpretR', '0.2.4', local_ext_options), + ('cvAUC', '1.1.0', local_ext_options), + ('SuperLearner', '2.0-19', local_ext_options), + ('lpSolve', '5.6.13', local_ext_options), + ('mediation', '4.4.5', local_ext_options), + ('caret', '6.0-70', local_ext_options), + ('adabag', '4.1', local_ext_options), + ('parallelMap', '1.3', local_ext_options), + ('ParamHelpers', '1.7', local_ext_options), + ('ggvis', '0.4.2', local_ext_options), + ('mlr', '2.8', local_ext_options), + ('unbalanced', '2.0', local_ext_options), + ('RSNNS', '0.4-7', local_ext_options), + ('abc.data', '1.0', local_ext_options), + ('abc', '2.1', local_ext_options), + ('lhs', '0.13', local_ext_options), + ('tensorA', '0.36', local_ext_options), + ('EasyABC', '1.5', local_ext_options), + ('shape', '1.4.2', local_ext_options), + ('whisker', '0.3-2', local_ext_options), + ('rstudioapi', '0.6', local_ext_options), + ('roxygen2', '5.0.1', local_ext_options), + ('git2r', '0.15.0', local_ext_options), + ('rversions', '1.0.2', local_ext_options), + ('withr', '1.0.2', local_ext_options), + ('devtools', '1.12.0', local_ext_options), + ('Rook', '1.1-1', local_ext_options), + ('rjson', '0.2.15', local_ext_options), + ('Cairo', '1.5-9', local_ext_options), + ('RMTstat', '0.3', local_ext_options), + ('Lmoments', '1.2-3', local_ext_options), + ('distillery', '1.0-2', local_ext_options), + ('extRemes', '2.0-7', local_ext_options), + ('pixmap', '0.4-11', local_ext_options), + ('tkrplot', '0.0-23', local_ext_options), + ('misc3d', '0.8-4', local_ext_options), + ('multicool', '0.1-9', local_ext_options), + ('ks', '1.10.4', local_ext_options), + ('logcondens', '2.1.4', local_ext_options), + ('Iso', '0.0-17', local_ext_options), + ('penalized', '0.9-47', local_ext_options), + ('clusterRepro', '0.5-1.1', local_ext_options), + ('randomForestSRC', '2.2.0', local_ext_options), + ('sm', '2.2-5.4', local_ext_options), + ('psych', '1.6.6', local_ext_options), + ('pbivnorm', '0.6.0', local_ext_options), + ('lavaan', '0.5-20', local_ext_options), + ('matrixcalc', '1.0-3', local_ext_options), + ('arm', '1.8-6', local_ext_options), + ('mi', '1.0', local_ext_options), + ('htmlwidgets', '0.6', local_ext_options), + ('visNetwork', '1.0.1', local_ext_options), + ('DiagrammeR', '0.8.2', local_ext_options), + ('sem', '3.1-7', local_ext_options), + ('jpeg', '0.1-8', local_ext_options), + ('sna', '2.3-2', local_ext_options), + ('glasso', '1.8', local_ext_options), + ('huge', '1.2.7', local_ext_options), + ('d3Network', '0.5.2.1', local_ext_options), + ('ggm', '2.3', local_ext_options), + ('qgraph', '1.3.4', local_ext_options), + ('diveRsity', '1.9.89', local_ext_options), + ('doSNOW', '1.0.14', local_ext_options), + ('phangorn', '2.0.4', local_ext_options), + ('geepack', '1.2-0.2', local_ext_options), + ('lubridate', '1.5.6', local_ext_options), + ('biom', '0.3.12', local_ext_options), + ('pim', '2.0.0.2', local_ext_options), + ('minpack.lm', '1.2-1', local_ext_options), + ('rootSolve', '1.7', local_ext_options), + ('diagram', '1.6.3', local_ext_options), + ('FME', '1.3.5', local_ext_options), ] moduleclass = 'lang' diff --git a/ARCHIVE/r/RELION/RELION-1.3-intel-2015b.eb b/ARCHIVE/r/RELION/RELION-1.3-intel-2015b.eb index 211c4c40..687505c4 100644 --- a/ARCHIVE/r/RELION/RELION-1.3-intel-2015b.eb +++ b/ARCHIVE/r/RELION/RELION-1.3-intel-2015b.eb @@ -15,7 +15,7 @@ sources = [SOURCELOWER_TAR_BZ2] patches = ['RELION-%(version)s_fltk-config.patch'] -pythonversion = '-Python-2.7.8' +local_pythonversion = '-Python-2.7.8' builddependencies = [ ('xextproto', '7.3.0'), @@ -23,10 +23,10 @@ builddependencies = [ dependencies = [ ('FFTW', '3.3.4'), ('FLTK', '1.3.2'), - ('libX11', '1.6.2', pythonversion), + ('libX11', '1.6.2', local_pythonversion), ('fontconfig', '2.11.1'), ('libXft', '2.3.2'), - ('libXext', '1.3.2', pythonversion), + ('libXext', '1.3.2', local_pythonversion), ('libXinerama', '1.1.3'), ] diff --git a/ARCHIVE/r/ROOT/ROOT-v5.34.01-intel-2015a.eb b/ARCHIVE/r/ROOT/ROOT-v5.34.01-intel-2015a.eb index afd5022f..8c1431e0 100644 --- a/ARCHIVE/r/ROOT/ROOT-v5.34.01-intel-2015a.eb +++ b/ARCHIVE/r/ROOT/ROOT-v5.34.01-intel-2015a.eb @@ -15,13 +15,13 @@ patches = [ 'ROOT-%(version)s_recent-ifort.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' dependencies = [ ('GSL', '1.15'), - ('libxml2', '2.8.0', '-%s-%s' % (python, local_pyver)), - (python, local_pyver), + ('libxml2', '2.8.0', '-%s-%s' % (local_python, local_pyver)), + (local_python, local_pyver), ] # architecture @@ -34,6 +34,6 @@ configopts += ' --enable-unuran --enable-table --enable-explicitlink --enable-mi configopts += ' --with-gsl-incdir=$EBROOTGSL/include/gsl --with-gsl-libdir=$EBROOTGSL/lib' configopts += ' --with-fftw3-incdir=$EBROOTIMKL/mkl/include/fftw --with-fftw3-libdir=$EBROOTIMKL/mkl/lib/intel64' configopts += ' --with-xml-incdir=$EBROOTLIBXML2/include/libxml2/libxml --with-xml-libdir=$EBROOTLIBXML2/lib' -configopts += ' --with-python-libdir=$EBROOTPYTHON/lib' +configopts += ' --with-local_python-libdir=$EBROOTPYTHON/lib' moduleclass = 'data' diff --git a/ARCHIVE/r/ROOT/ROOT-v5.34.26-intel-2015a.eb b/ARCHIVE/r/ROOT/ROOT-v5.34.26-intel-2015a.eb index 9eaf1cbe..670f00b7 100644 --- a/ARCHIVE/r/ROOT/ROOT-v5.34.26-intel-2015a.eb +++ b/ARCHIVE/r/ROOT/ROOT-v5.34.26-intel-2015a.eb @@ -16,17 +16,17 @@ patches = [ 'ROOT-v5.34.26_libX.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' dependencies = [ ('GSL', '1.16'), - ('Mesa', '10.4.5', '-%s-%s' % (python, local_pyver)), - ('libxml2', '2.9.2', '-%s-%s' % (python, local_pyver)), + ('Mesa', '10.4.5', '-%s-%s' % (local_python, local_pyver)), + ('libxml2', '2.9.2', '-%s-%s' % (local_python, local_pyver)), ('PCRE', '8.36'), ('CFITSIO', '3.37'), ('freetype', '2.5.5'), - (python, local_pyver), + (local_python, local_pyver), ('zlib', '1.2.8'), ('libXft', '2.3.2', '-libX11-1.6.3'), ('libXpm', '3.5.11'), @@ -47,7 +47,7 @@ configopts += ' --enable-unuran --enable-table --enable-explicitlink --enable-mi configopts += ' --with-gsl-incdir=$EBROOTGSL/include/gsl --with-gsl-libdir=$EBROOTGSL/lib' configopts += ' --with-fftw3-incdir=$MKLROOT/mkl/include/fftw --with-fftw3-libdir=$MKLROOT/mkl/lib/intel64' configopts += ' --with-xml-incdir=$EBROOTLIBXML2/include/libxml2/libxml --with-xml-libdir=$EBROOTLIBXML2/lib' -configopts += ' --with-python-libdir=$EBROOTPYTHON/lib' +configopts += ' --with-local_python-libdir=$EBROOTPYTHON/lib' configopts += ' --with-cfitsio-incdir=$EBROOTCFITSIO/include --with-cfitsio-libdir=$EBROOTCFITSIO/lib' configopts += ' --with-opengl-incdir=$EBROOTMESA/include --with-opengl-libdir=$EBROOTMESA/lib' configopts += ' --with-x11-libdir=$EBROOTLIBX11/lib --with-xext-libdir=$EBROOTLIBXEXT/lib' diff --git a/ARCHIVE/s/SCons/SCons-2.3.6-intel-2015b-Python-2.7.9.eb b/ARCHIVE/s/SCons/SCons-2.3.6-intel-2015b-Python-2.7.9.eb index 3552077f..d756ef8a 100644 --- a/ARCHIVE/s/SCons/SCons-2.3.6-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/s/SCons/SCons-2.3.6-intel-2015b-Python-2.7.9.eb @@ -11,10 +11,10 @@ toolchain = {'name': 'intel', 'version': '2015b'} sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://prdownloads.sourceforge.net/%(namelower)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) -dependencies = [(python, local_pyver)] +versionsuffix = '-%s-%s' % (local_python, local_pyver) +dependencies = [(local_python, local_pyver)] sanity_check_paths = { 'files': ['bin/scons', 'bin/scons-time', 'bin/sconsign'], diff --git a/ARCHIVE/s/SCons/SCons-2.5.1-Python-2.7.13.eb b/ARCHIVE/s/SCons/SCons-2.5.1-Python-2.7.13.eb index 6f12daae..c2036dab 100644 --- a/ARCHIVE/s/SCons/SCons-2.5.1-Python-2.7.13.eb +++ b/ARCHIVE/s/SCons/SCons-2.5.1-Python-2.7.13.eb @@ -11,10 +11,10 @@ toolchain = SYSTEM sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://prdownloads.sourceforge.net/%(namelower)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.13' -versionsuffix = '-%s-%s' % (python, local_pyver) -dependencies = [(python, local_pyver, '', True)] +versionsuffix = '-%s-%s' % (local_python, local_pyver) +dependencies = [(local_python, local_pyver, '', True)] sanity_check_paths = { 'files': ['bin/scons', 'bin/scons-time', 'bin/sconsign'], diff --git a/ARCHIVE/s/SCons/SCons-2.5.1-intel-2015b-Python-2.7.11.eb b/ARCHIVE/s/SCons/SCons-2.5.1-intel-2015b-Python-2.7.11.eb index 254a2e17..1a395708 100644 --- a/ARCHIVE/s/SCons/SCons-2.5.1-intel-2015b-Python-2.7.11.eb +++ b/ARCHIVE/s/SCons/SCons-2.5.1-intel-2015b-Python-2.7.11.eb @@ -11,10 +11,10 @@ toolchain = {'name': 'intel', 'version': '2015b'} sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://prdownloads.sourceforge.net/%(namelower)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.11' -versionsuffix = '-%s-%s' % (python, local_pyver) -dependencies = [(python, local_pyver)] +versionsuffix = '-%s-%s' % (local_python, local_pyver) +dependencies = [(local_python, local_pyver)] sanity_check_paths = { 'files': ['bin/scons', 'bin/scons-time', 'bin/sconsign'], diff --git a/ARCHIVE/s/SCons/SCons-2.5.1-intel-2017a-Python-2.7.13.eb b/ARCHIVE/s/SCons/SCons-2.5.1-intel-2017a-Python-2.7.13.eb index 8f653291..289eda38 100644 --- a/ARCHIVE/s/SCons/SCons-2.5.1-intel-2017a-Python-2.7.13.eb +++ b/ARCHIVE/s/SCons/SCons-2.5.1-intel-2017a-Python-2.7.13.eb @@ -11,10 +11,10 @@ toolchain = {'name': 'intel', 'version': '2017a'} sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://prdownloads.sourceforge.net/%(namelower)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.13' -versionsuffix = '-%s-%s' % (python, local_pyver) -dependencies = [(python, local_pyver, '', True)] +versionsuffix = '-%s-%s' % (local_python, local_pyver) +dependencies = [(local_python, local_pyver, '', True)] sanity_check_paths = { 'files': ['bin/scons', 'bin/scons-time', 'bin/sconsign'], diff --git a/ARCHIVE/s/SCons/SCons-3.0.0-intel-2017a-Python-2.7.13.eb b/ARCHIVE/s/SCons/SCons-3.0.0-intel-2017a-Python-2.7.13.eb index 229e6435..db2df4dd 100644 --- a/ARCHIVE/s/SCons/SCons-3.0.0-intel-2017a-Python-2.7.13.eb +++ b/ARCHIVE/s/SCons/SCons-3.0.0-intel-2017a-Python-2.7.13.eb @@ -11,10 +11,10 @@ toolchain = {'name': 'intel', 'version': '2017a'} sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://prdownloads.sourceforge.net/%(namelower)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.13' -versionsuffix = '-%s-%s' % (python, local_pyver) -dependencies = [(python, local_pyver, '', True)] +versionsuffix = '-%s-%s' % (local_python, local_pyver) +dependencies = [(local_python, local_pyver, '', True)] sanity_check_paths = { 'files': ['bin/scons', 'bin/scons-time', 'bin/sconsign'], diff --git a/ARCHIVE/s/SIP/SIP-4.16.4-foss-2015g-Python-2.7.9.eb b/ARCHIVE/s/SIP/SIP-4.16.4-foss-2015g-Python-2.7.9.eb index cfe9bc5e..835185c9 100644 --- a/ARCHIVE/s/SIP/SIP-4.16.4-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/s/SIP/SIP-4.16.4-foss-2015g-Python-2.7.9.eb @@ -15,17 +15,17 @@ sources = [SOURCELOWER_TAR_GZ] source_urls = [ 'http://sourceforge.net/projects/pyqt/files/sip/sip-%(version)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) -dependencies = [(python, local_pyver)] +dependencies = [(local_python, local_pyver)] configopts = "configure.py" skipsteps = ['sanitycheck'] -python_siteconfig_path = "$EBROOTPYTHON/site-packages" +local_python_siteconfig_path = "$EBROOTPYTHON/site-packages" sanity_check_paths = { 'files': ['/apps/all/Python/2.7.9-foss-2015g/lib/python2.7/site-packages/sipconfig.py'], diff --git a/ARCHIVE/s/SIP/SIP-4.17-foss-2015g-Python-2.7.9.eb b/ARCHIVE/s/SIP/SIP-4.17-foss-2015g-Python-2.7.9.eb index 3bd30208..5e9ddec7 100644 --- a/ARCHIVE/s/SIP/SIP-4.17-foss-2015g-Python-2.7.9.eb +++ b/ARCHIVE/s/SIP/SIP-4.17-foss-2015g-Python-2.7.9.eb @@ -15,17 +15,17 @@ sources = [SOURCELOWER_TAR_GZ] source_urls = [ 'http://sourceforge.net/projects/pyqt/files/sip/sip-%(version)s'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) +versionsuffix = '-%s-%s' % (local_python, local_pyver) -dependencies = [(python, local_pyver)] +dependencies = [(local_python, local_pyver)] configopts = "configure.py" skipsteps = ['sanitycheck'] -python_siteconfig_path = "$EBROOTPYTHON/site-packages" +local_python_siteconfig_path = "$EBROOTPYTHON/site-packages" sanity_check_paths = { 'files': ['/apps/all/Python/2.7.9-foss-2015g/lib/python2.7/site-packages/sipconfig.py'], diff --git a/ARCHIVE/s/SQLite/SQLite-3.10.1-foss-2015g.eb b/ARCHIVE/s/SQLite/SQLite-3.10.1-foss-2015g.eb index 7aad6258..f78d86cb 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.10.1-foss-2015g.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.10.1-foss-2015g.eb @@ -22,7 +22,7 @@ toolchain = {'name': 'foss', 'version': '2015g'} # eg. https://www.sqlite.org/2016/sqlite-autoconf-3100100.tar.gz source_urls = ['http://www.sqlite.org/2016/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[2:]) + '00' sources = ['sqlite-autoconf-3100100.tar.gz'] diff --git a/ARCHIVE/s/SQLite/SQLite-3.13.0-intel-2017a.eb b/ARCHIVE/s/SQLite/SQLite-3.13.0-intel-2017a.eb index ddca7b79..2d39fde5 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.13.0-intel-2017a.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.13.0-intel-2017a.eb @@ -21,11 +21,11 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = {'name': 'intel', 'version': '2017a'} source_urls = ['http://www.sqlite.org/2016/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015a.eb b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015a.eb index 08a5a206..a7e6401b 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015a.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015a.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'foss', 'version': '2015a'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015b.eb b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015b.eb index 8caee065..b70af7ef 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015b.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-foss-2015b.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'foss', 'version': '2015b'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015a.eb b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015a.eb index a99ecb85..915498ca 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015a.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015a.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'intel', 'version': '2015a'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015b.eb b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015b.eb index 1a70f28d..e76c9799 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015b.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.8.10.2-intel-2015b.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'intel', 'version': '2015b'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2015g.eb b/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2015g.eb index e38b579b..0801b261 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2015g.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2015g.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'foss', 'version': '2015g'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] patches = ['enable_column_metadata.patch'] diff --git a/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2016a.eb b/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2016a.eb index 3abe8ca9..b7854b82 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2016a.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.8.8.1-foss-2016a.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'foss', 'version': '2016a'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.8.8.1-intel-2015b.eb b/ARCHIVE/s/SQLite/SQLite-3.8.8.1-intel-2015b.eb index 2f8dd41c..4d73ff08 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.8.8.1-intel-2015b.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.8.8.1-intel-2015b.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'intel', 'version': '2015b'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2016a.eb b/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2016a.eb index 80f7da61..0ef0524c 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2016a.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2016a.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'foss', 'version': '2016a'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2017a.eb b/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2017a.eb index 028600bd..f6779afc 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2017a.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.9.2-foss-2017a.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'foss', 'version': '2017a'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2015b.eb b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2015b.eb index a3a08529..f355316f 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2015b.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2015b.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'intel', 'version': '2015b'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016.02-GCC-4.9.eb b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016.02-GCC-4.9.eb index 89f7fe85..c4f4b47e 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016.02-GCC-4.9.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016.02-GCC-4.9.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'intel', 'version': '2016.02-GCC-4.9'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016a.eb b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016a.eb index 963bc7a8..3d6ac14f 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016a.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2016a.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'intel', 'version': '2016a'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2017.00.eb b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2017.00.eb index 5ce3e47e..31667762 100644 --- a/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2017.00.eb +++ b/ARCHIVE/s/SQLite/SQLite-3.9.2-intel-2017.00.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'intel', 'version': '2017.00'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/ARCHIVE/s/STREAM/STREAM-5.10-intel-2015a.eb b/ARCHIVE/s/STREAM/STREAM-5.10-intel-2015a.eb index 2b0e61ef..7060e146 100644 --- a/ARCHIVE/s/STREAM/STREAM-5.10-intel-2015a.eb +++ b/ARCHIVE/s/STREAM/STREAM-5.10-intel-2015a.eb @@ -17,13 +17,13 @@ checksums = ['dd2941e3a28ff90a79b571273c10aacf'] skipsteps = ['source'] # 10 million array elements (1000 runs): requires ~224MB of memory -cmds_str = "$CC $CFLAGS %(source)s -mcmodel=large -DSTREAM_ARRAY_SIZE=10000000 -DNTIMES=1000 -o stream_1Kx10M; " +local_cmds_str = "$CC $CFLAGS %(source)s -mcmodel=large -DSTREAM_ARRAY_SIZE=10000000 -DNTIMES=1000 -o stream_1Kx10M; " # 100 million array elements (1000 runs): requires ~2.2GiB of memory -cmds_str += "$CC $CFLAGS %(source)s -mcmodel=large -DSTREAM_ARRAY_SIZE=100000000 -DNTIMES=1000 -o stream_1Kx100M; " +local_cmds_str += "$CC $CFLAGS %(source)s -mcmodel=large -DSTREAM_ARRAY_SIZE=100000000 -DNTIMES=1000 -o stream_1Kx100M; " # 1 billion array elements (1000 runs): requires ~22.4 GiB of memory -cmds_str += "$CC $CFLAGS %(source)s -mcmodel=large -DSTREAM_ARRAY_SIZE=1000000000 -DNTIMES=1000 -o stream_1Kx1B; " +local_cmds_str += "$CC $CFLAGS %(source)s -mcmodel=large -DSTREAM_ARRAY_SIZE=1000000000 -DNTIMES=1000 -o stream_1Kx1B; " -cmds_map = [('stream.c', cmds_str)] +cmds_map = [('stream.c', local_cmds_str)] files_to_copy = [(['stream_1Kx10M', 'stream_1Kx100M', 'stream_1Kx1B'], 'bin')] diff --git a/ARCHIVE/s/SWIG/SWIG-2.0.12-intel-2015b-Python-2.7.9.eb b/ARCHIVE/s/SWIG/SWIG-2.0.12-intel-2015b-Python-2.7.9.eb index b088a98b..79c453ca 100644 --- a/ARCHIVE/s/SWIG/SWIG-2.0.12-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/s/SWIG/SWIG-2.0.12-intel-2015b-Python-2.7.9.eb @@ -12,12 +12,12 @@ toolchainopts = {'pic': True, 'opt': True, 'optarch': True} source_urls = [SOURCEFORGE_SOURCE] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -versionsuffix = '-%s-%s' % (python, pythonversion) +local_python = "Python" +local_pythonversion = '2.7.9' +versionsuffix = '-%s-%s' % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('PCRE', '8.36'), ] diff --git a/ARCHIVE/s/SWIG/SWIG-3.0.7-intel-2015b-Python-2.7.9.eb b/ARCHIVE/s/SWIG/SWIG-3.0.7-intel-2015b-Python-2.7.9.eb index 4b38a64a..2ff6a18d 100644 --- a/ARCHIVE/s/SWIG/SWIG-3.0.7-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/s/SWIG/SWIG-3.0.7-intel-2015b-Python-2.7.9.eb @@ -11,12 +11,12 @@ toolchainopts = {'pic': True, 'opt': True, 'optarch': True} source_urls = [SOURCEFORGE_SOURCE] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -versionsuffix = '-%s-%s' % (python, pythonversion) +local_python = "Python" +local_pythonversion = '2.7.9' +versionsuffix = '-%s-%s' % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('PCRE', '8.36'), ] diff --git a/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2015b-Python-2.7.9.eb b/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2015b-Python-2.7.9.eb index 468d3f6f..d06530b2 100644 --- a/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2015b-Python-2.7.9.eb @@ -13,14 +13,14 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = ['https://sourcesup.renater.fr/frs/download.php/4570'] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonversion = '2.7.9' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = 'Python' +local_pythonversion = '2.7.9' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), # older version of numpy than the one included in Python module required # cfr. # https://bitbucket.org/khinsen/scientificpython/issue/13/numpy-19-has-dropped-support-for @@ -31,7 +31,7 @@ options = {'modulename': 'Scientific'} sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/Scientific' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/Scientific' % local_pythonshortversion], } moduleclass = 'math' diff --git a/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2017.00-Python-3.5.2.eb b/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2017.00-Python-3.5.2.eb index f93f958a..1171d1e3 100644 --- a/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2017.00-Python-3.5.2.eb +++ b/ARCHIVE/s/ScientificPython/ScientificPython-2.9.4-intel-2017.00-Python-3.5.2.eb @@ -13,14 +13,14 @@ toolchain = {'name': 'intel', 'version': '2017.00'} source_urls = ['https://sourcesup.renater.fr/frs/download.php/4570'] sources = [SOURCE_TAR_GZ] -python = 'Python' -pythonversion = '3.5.2' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = 'Python' +local_pythonversion = '3.5.2' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), # older version of numpy than the one included in Python module required # cfr. https://bitbucket.org/khinsen/scientificpython/issue/13/numpy-19-has-dropped-support-for #('numpy', '1.8.2', versionsuffix), numpy is into Python @@ -30,7 +30,7 @@ options = {'modulename': 'Scientific'} sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/Scientific' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/Scientific' % local_pythonshortversion], } moduleclass = 'math' diff --git a/ARCHIVE/s/Sen2Cor/Sen2Cor-2.3.1-Python-2.7.13.eb b/ARCHIVE/s/Sen2Cor/Sen2Cor-2.3.1-Python-2.7.13.eb index a273b018..38d0600c 100644 --- a/ARCHIVE/s/Sen2Cor/Sen2Cor-2.3.1-Python-2.7.13.eb +++ b/ARCHIVE/s/Sen2Cor/Sen2Cor-2.3.1-Python-2.7.13.eb @@ -18,15 +18,15 @@ toolchain = SYSTEM source_urls = ['http://step.esa.int/thirdparties/sen2cor/%(version)s/'] sources = ['%(namelower)s-%(version)s.tar.gz'] -python = "Python" -python_version = "2.7.13" -versionsuffix = '-%s-%s' % (python, python_version) +local_python = "Python" +local_python_version = "2.7.13" +versionsuffix = '-%s-%s' % (local_python, local_python_version) patches = ['%(name)s-%(version)s-Python-2.7.13.patch'] dependencies = [ - (python, python_version), - ('GDAL', '2.1.3', '-%s-%s' % (python, python_version)), + (local_python, local_python_version), + ('GDAL', '2.1.3', '-%s-%s' % (local_python, local_python_version)), ] sanity_check_paths = { diff --git a/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-2.7.11.eb b/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-2.7.11.eb index 975350e1..5ae49823 100644 --- a/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-2.7.11.eb +++ b/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-2.7.11.eb @@ -64,7 +64,7 @@ postinstallcmds = [' && '.join([ # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [ diff --git a/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-3.5.1.eb b/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-3.5.1.eb index 50e2ad4d..fdf1c809 100644 --- a/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-3.5.1.eb +++ b/ARCHIVE/s/Sphinx/Sphinx-1.4.8-foss-2016a-Python-3.5.1.eb @@ -64,7 +64,7 @@ postinstallcmds = [' && '.join([ # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [ diff --git a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.3-intel-2015b-ParMETIS-4.0.3.eb b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.3-intel-2015b-ParMETIS-4.0.3.eb index 8d48751e..3c8d45ed 100644 --- a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.3-intel-2015b-ParMETIS-4.0.3.eb +++ b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.3-intel-2015b-ParMETIS-4.0.3.eb @@ -10,10 +10,10 @@ toolchainopts = {'opt': True, 'unroll': True, 'pic': True, 'static': True} source_urls = ['http://faculty.cse.tamu.edu/davis/SuiteSparse/'] sources = [SOURCE_TAR_GZ] -parmetis = 'ParMETIS' -parmetis_ver = '4.0.3' -versionsuffix = '-%s-%s' % (parmetis, parmetis_ver) -dependencies = [(parmetis, parmetis_ver)] +local_parmetis = 'ParMETIS' +local_parmetis_ver = '4.0.3' +versionsuffix = '-%s-%s' % (local_parmetis, local_parmetis_ver) +dependencies = [(local_parmetis, local_parmetis_ver)] maxparallel = 1 diff --git a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.6-intel-2015b-ParMETIS-4.0.3.eb b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.6-intel-2015b-ParMETIS-4.0.3.eb index f7e3ca89..8596d015 100644 --- a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.6-intel-2015b-ParMETIS-4.0.3.eb +++ b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.4.6-intel-2015b-ParMETIS-4.0.3.eb @@ -10,10 +10,10 @@ toolchainopts = {'opt': True, 'unroll': True, 'pic': True} source_urls = ['http://faculty.cse.tamu.edu/davis/SuiteSparse/'] sources = [SOURCE_TAR_GZ] -parmetis = 'ParMETIS' -parmetis_ver = '4.0.3' -versionsuffix = '-%s-%s' % (parmetis, parmetis_ver) -dependencies = [(parmetis, parmetis_ver)] +local_parmetis = 'ParMETIS' +local_parmetis_ver = '4.0.3' +versionsuffix = '-%s-%s' % (local_parmetis, local_parmetis_ver) +dependencies = [(local_parmetis, local_parmetis_ver)] maxparallel = 1 diff --git a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017.00-METIS-5.1.0.eb b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017.00-METIS-5.1.0.eb index 4941d502..15044090 100644 --- a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017.00-METIS-5.1.0.eb +++ b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017.00-METIS-5.1.0.eb @@ -10,10 +10,10 @@ toolchainopts = {'opt': True, 'unroll': True, 'pic': True} source_urls = ['http://faculty.cse.tamu.edu/davis/SuiteSparse/'] sources = [SOURCE_TAR_GZ] -metis = 'METIS' -metis_ver = '5.1.0' -versionsuffix = '-%s-%s' % (metis, metis_ver) -dependencies = [(metis, metis_ver)] +local_metis = 'METIS' +local_metis_ver = '5.1.0' +versionsuffix = '-%s-%s' % (local_metis, local_metis_ver) +dependencies = [(local_metis, local_metis_ver)] maxparallel = 1 diff --git a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017a-ParMETIS-4.0.3.eb b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017a-ParMETIS-4.0.3.eb index 9b4ce0c0..56dddd9b 100644 --- a/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017a-ParMETIS-4.0.3.eb +++ b/ARCHIVE/s/SuiteSparse/SuiteSparse-4.5.3-intel-2017a-ParMETIS-4.0.3.eb @@ -10,10 +10,10 @@ toolchainopts = {'opt': True, 'unroll': True, 'pic': True} source_urls = ['http://faculty.cse.tamu.edu/davis/SuiteSparse/'] sources = [SOURCE_TAR_GZ] -parmetis = 'ParMETIS' -parmetis_ver = '4.0.3' -versionsuffix = '-%s-%s' % (parmetis, parmetis_ver) -dependencies = [(parmetis, parmetis_ver)] +local_parmetis = 'ParMETIS' +local_parmetis_ver = '4.0.3' +versionsuffix = '-%s-%s' % (local_parmetis, local_parmetis_ver) +dependencies = [(local_parmetis, local_parmetis_ver)] maxparallel = 1 diff --git a/ARCHIVE/s/scikit/scikit-image-0.12.3-Python-2.7.13.eb b/ARCHIVE/s/scikit/scikit-image-0.12.3-Python-2.7.13.eb index 812d42e7..40e8d3d8 100644 --- a/ARCHIVE/s/scikit/scikit-image-0.12.3-Python-2.7.13.eb +++ b/ARCHIVE/s/scikit/scikit-image-0.12.3-Python-2.7.13.eb @@ -15,14 +15,14 @@ toolchain = SYSTEM source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -freetype_ver = '2.6.3' +local_freetype_ver = '2.6.3' dependencies = [ ('Python', '2.7.13'), ('Qhull', '2015.2'), - ('matplotlib', '1.5.1', versionsuffix + '-freetype-%s' % freetype_ver), + ('matplotlib', '1.5.1', versionsuffix + '-freetype-%s' % local_freetype_ver), ('networkx', '1.11', versionsuffix), - ('Pillow', '3.2.0', versionsuffix + '-freetype-%s' % freetype_ver), + ('Pillow', '3.2.0', versionsuffix + '-freetype-%s' % local_freetype_ver), ] options = {'modulename': 'skimage'} diff --git a/ARCHIVE/s/seekpath/seekpath-1.5.0-Python-2.7.13-base.eb b/ARCHIVE/s/seekpath/seekpath-1.5.0-Python-2.7.13-base.eb index 26ae6276..5ea5531d 100644 --- a/ARCHIVE/s/seekpath/seekpath-1.5.0-Python-2.7.13-base.eb +++ b/ARCHIVE/s/seekpath/seekpath-1.5.0-Python-2.7.13-base.eb @@ -4,7 +4,7 @@ name = 'seekpath' version = '1.5.0' homepage = 'https://github.com/giovannipizzi/seekpath' -description = """SeeK-path is a python module to obtain and visualize band paths in the Brillouin zone of crystal structures. +description = """SeeK-path is a local_python module to obtain and visualize band paths in the Brillouin zone of crystal structures. The definition of k-point labels follows crystallographic convention, as defined and discussed in the HPKOT paper. Moreover, the Bravais lattice is detected properly using the spacegroup symmetry. Also the suggested band path provided in the HPKOT paper is returned. Systems without time-reversal and inversion-symmetry are also properly taken into account.""" @@ -12,23 +12,23 @@ paper is returned. Systems without time-reversal and inversion-symmetry are also toolchain = SYSTEM source_urls = [ - 'https://pypi.python.org/packages/34/a0/3070823a5801e073cd9b961d8060b5ed6ad07fd255c8a1b10a8073c80e1c/'] + 'https://pypi.local_python.org/packages/34/a0/3070823a5801e073cd9b961d8060b5ed6ad07fd255c8a1b10a8073c80e1c/'] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.13' -local_pyshortver = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.13' +local_pyshortver = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s-base" % (python, pythonversion) +versionsuffix = "-%s-%s-base" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion, '-base'), + (local_python, local_pythonversion, '-base'), ('numpy', '1.13.0', versionsuffix), ('scipy', '0.19.1', versionsuffix), ] sanity_check_commands = [ - ('python', + ('local_python', '-c "import seekpath; assert(seekpath.__version__ == \'%(version)s\')"')] moduleclass = 'vis' diff --git a/ARCHIVE/s/stemming/stemming-1.0-ictce-5.5.0-Python-2.7.6.eb b/ARCHIVE/s/stemming/stemming-1.0-ictce-5.5.0-Python-2.7.6.eb index 6df1c80a..af45c13e 100644 --- a/ARCHIVE/s/stemming/stemming-1.0-ictce-5.5.0-Python-2.7.6.eb +++ b/ARCHIVE/s/stemming/stemming-1.0-ictce-5.5.0-Python-2.7.6.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = "stemming" version = "1.0" -homepage = "https://pypi.python.org/pypi/stemming/" +homepage = "https://pypi.local_python.org/pypi/stemming/" description = """Python implementations of the Porter, Porter2, Paice-Husk, and Lovins stemming algorithms for English.""" toolchain = {'name': 'ictce', 'version': '5.5.0'} @@ -11,20 +11,20 @@ toolchain = {'name': 'ictce', 'version': '5.5.0'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = "Python" -pythonversion = "2.7.6" +local_python = "Python" +local_pythonversion = "2.7.6" -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] -py_short_ver = ".".join(pythonversion.split(".")[0:2]) -pylibdir = "lib/python%s/site-packages/%s" % (py_short_ver, name) +local_py_short_ver = ".".join(local_pythonversion.split(".")[0:2]) +local_pylibdir = "lib/local_python%s/site-packages/%s" % (local_py_short_ver, name) sanity_check_paths = { 'files': [ ("%s-%%(version)s-py%s.egg" % - (pylibdir, py_short_ver), "%s-%%(version)s-py%s-linux-x86_64.egg" % - (pylibdir, py_short_ver))], 'dirs': [], } + (local_pylibdir, local_py_short_ver), "%s-%%(version)s-py%s-linux-x86_64.egg" % + (local_pylibdir, local_py_short_ver))], 'dirs': [], } moduleclass = 'lib' diff --git a/ARCHIVE/s/sympy/sympy-0.7.6-intel-2015b-Python-2.7.9.eb b/ARCHIVE/s/sympy/sympy-0.7.6-intel-2015b-Python-2.7.9.eb index 0d589282..f4359c24 100644 --- a/ARCHIVE/s/sympy/sympy-0.7.6-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/s/sympy/sympy-0.7.6-intel-2015b-Python-2.7.9.eb @@ -15,19 +15,19 @@ source_urls = [ 'https://github.com/sympy/sympy/releases/download/sympy-%(version)s/'] sources = [SOURCE_TAR_GZ] -python = "Python" -pythonversion = '2.7.9' -pythonshortversion = '.'.join(pythonversion.split('.')[:-1]) +local_python = "Python" +local_pythonversion = '2.7.9' +local_pythonshortversion = '.'.join(local_pythonversion.split('.')[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] -runtest = 'python setup.py test' +runtest = 'local_python setup.py test' sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages/sympy' % pythonshortversion], + 'dirs': ['lib/local_python%s/site-packages/sympy' % local_pythonshortversion], } skipsteps = ['test'] diff --git a/ARCHIVE/t/Tensorflow/Tensorflow-0.12.1-intel-2017.00-Python-2.7.11.eb b/ARCHIVE/t/Tensorflow/Tensorflow-0.12.1-intel-2017.00-Python-2.7.11.eb index 84a3f78e..e8e213f1 100644 --- a/ARCHIVE/t/Tensorflow/Tensorflow-0.12.1-intel-2017.00-Python-2.7.11.eb +++ b/ARCHIVE/t/Tensorflow/Tensorflow-0.12.1-intel-2017.00-Python-2.7.11.eb @@ -9,21 +9,21 @@ description = "An open-source software library for Machine Intelligence" toolchain = {'name': 'intel', 'version': '2017.00'} -pymaj = '2' -pymin = '7' -pymajmin = pymaj + pymin +local_pymaj = '2' +local_pymin = '7' +local_pymajmin = local_pymaj + local_pymin source_urls = [ 'https://pypi.python.org/packages/7e/c6/837f4e249aae5c86a632eaaa9779e601eca1487772f8ad75c347bf9e813f/'] sources = [ - 'tensorflow-%%(version)s-cp%(pymajmin)s-cp%(pymajmin)smu-manylinux1_x86_64.whl' % + 'tensorflow-%%(version)s-cp%(local_pymajmin)s-cp%(local_pymajmin)smu-manylinux1_x86_64.whl' % { - 'pymajmin': pymajmin}, + 'local_pymajmin': local_pymajmin}, ] checksums = ['c98fd26b79a97cc490c942bbafed5462'] dependencies = [ - ('Python', '%s.%s.11' % (pymaj, pymin)), + ('Python', '%s.%s.11' % (local_pymaj, local_pymin)), ('protobuf-python', '3.2.0', versionsuffix), ] diff --git a/ARCHIVE/t/Tensorflow/Tensorflow-1.2.0-intel-2017b-Python-3.6.1.eb b/ARCHIVE/t/Tensorflow/Tensorflow-1.2.0-intel-2017b-Python-3.6.1.eb index 4346fe8f..f095ccdf 100644 --- a/ARCHIVE/t/Tensorflow/Tensorflow-1.2.0-intel-2017b-Python-3.6.1.eb +++ b/ARCHIVE/t/Tensorflow/Tensorflow-1.2.0-intel-2017b-Python-3.6.1.eb @@ -9,9 +9,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = {'name': 'intel', 'version': '2017b'} -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ diff --git a/ARCHIVE/t/Tensorflow/Tensorflow-1.3.0-intel-2017b-Python-3.6.1.eb b/ARCHIVE/t/Tensorflow/Tensorflow-1.3.0-intel-2017b-Python-3.6.1.eb index 94c04ad6..e13b9e12 100644 --- a/ARCHIVE/t/Tensorflow/Tensorflow-1.3.0-intel-2017b-Python-3.6.1.eb +++ b/ARCHIVE/t/Tensorflow/Tensorflow-1.3.0-intel-2017b-Python-3.6.1.eb @@ -9,9 +9,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = {'name': 'intel', 'version': '2017b'} -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin sources = [ 'tensorflow-%(version)src1-cp36-cp36m-linux_x86_64.whl', diff --git a/ARCHIVE/t/Trinity/Trinity-2.1.1-intel-2015b.eb b/ARCHIVE/t/Trinity/Trinity-2.1.1-intel-2015b.eb index 5f116c4b..aff79030 100644 --- a/ARCHIVE/t/Trinity/Trinity-2.1.1-intel-2015b.eb +++ b/ARCHIVE/t/Trinity/Trinity-2.1.1-intel-2015b.eb @@ -10,8 +10,8 @@ toolchainopts = {'optarch': True} source_urls = ['https://github.com/trinityrnaseq/trinityrnaseq/archive/'] -java = 'Java' -javaver = '1.8.0_66' +local_java = 'Java' +local_javaver = '1.8.0_66' sources = ['v%(version)s.tar.gz'] @@ -25,8 +25,8 @@ builddependencies = [ ] dependencies = [ - (java, javaver, '', True), - ('ant', '1.9.6', '-%s-%s' % (java, javaver), True), + (local_java, local_javaver, '', True), + ('ant', '1.9.6', '-%s-%s' % (local_java, local_javaver), True), ('Bowtie', '1.1.2'), ('Bowtie2', '2.2.6'), ('ncurses', '5.9',), diff --git a/ARCHIVE/u/UFL/UFL-1.0.0-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/u/UFL/UFL-1.0.0-goolf-1.4.10-Python-2.7.3.eb index 8ea1a827..4d7b6952 100644 --- a/ARCHIVE/u/UFL/UFL-1.0.0-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/u/UFL/UFL-1.0.0-goolf-1.4.10-Python-2.7.3.eb @@ -10,19 +10,19 @@ for weak forms in a notation close to mathematical notation.""" toolchain = {'name': 'goolf', 'version': '1.4.10'} -majorversion = "%s.x" % ".".join(version.split('.')[:-1]) +local_majorversion = "%s.x" % ".".join(version.split('.')[:-1]) source_urls = [ 'https://launchpad.net/UFL/%s/%s/+download/' % - (majorversion, version)] + (local_majorversion, version)] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.3' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.3' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': [ @@ -34,7 +34,7 @@ sanity_check_paths = { "ufl-convert", "ufl-version"]], 'dirs': [ - 'lib/python%s/site-packages/ufl' % - pythonshortversion]} + 'lib/local_python%s/site-packages/ufl' % + local_pythonshortversion]} moduleclass = 'cae' diff --git a/ARCHIVE/u/UFL/UFL-1.0.0-ictce-5.3.0-Python-2.7.3.eb b/ARCHIVE/u/UFL/UFL-1.0.0-ictce-5.3.0-Python-2.7.3.eb index f6f80ff1..36a717ff 100644 --- a/ARCHIVE/u/UFL/UFL-1.0.0-ictce-5.3.0-Python-2.7.3.eb +++ b/ARCHIVE/u/UFL/UFL-1.0.0-ictce-5.3.0-Python-2.7.3.eb @@ -11,19 +11,19 @@ description = """The Unified Form Language (UFL) is a domain specific language f toolchain = {'name': 'ictce', 'version': '5.3.0'} -majorversion = "%s.x" % ".".join(version.split('.')[:-1]) +local_majorversion = "%s.x" % ".".join(version.split('.')[:-1]) source_urls = [ 'https://launchpad.net/UFL/%s/%s/+download/' % - (majorversion, version)] + (local_majorversion, version)] sources = [SOURCELOWER_TAR_GZ] -python = "Python" -pythonversion = '2.7.3' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '2.7.3' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) -dependencies = [(python, pythonversion)] +dependencies = [(local_python, local_pythonversion)] sanity_check_paths = { 'files': [ @@ -35,7 +35,7 @@ sanity_check_paths = { "ufl-convert", "ufl-version"]], 'dirs': [ - 'lib/python%s/site-packages/ufl' % - pythonshortversion]} + 'lib/local_python%s/site-packages/ufl' % + local_pythonshortversion]} moduleclass = 'cae' diff --git a/ARCHIVE/v/Valgrind/Valgrind-3.11.0-foss-2015b.eb b/ARCHIVE/v/Valgrind/Valgrind-3.11.0-foss-2015b.eb index 4a56fb2b..80b54f87 100644 --- a/ARCHIVE/v/Valgrind/Valgrind-3.11.0-foss-2015b.eb +++ b/ARCHIVE/v/Valgrind/Valgrind-3.11.0-foss-2015b.eb @@ -23,13 +23,13 @@ toolchain = {'name': 'foss', 'version': '2015b'} source_urls = ['http://valgrind.org/downloads/'] sources = [SOURCELOWER_TAR_BZ2] -binaries = [ +local_binaries = [ 'callgrind_annotate', 'callgrind_control', 'cg_annotate', 'cg_diff', 'cg_merge', 'ms_print', 'valgrind', 'valgrind-listener', 'vgdb' ] sanity_check_paths = { - 'files': ['bin/%s' % x for x in binaries], + 'files': ['bin/%s' % x for x in local_binaries], 'dirs': [] } diff --git a/ARCHIVE/v/Valgrind/Valgrind-3.11.0-intel-2015b.eb b/ARCHIVE/v/Valgrind/Valgrind-3.11.0-intel-2015b.eb index 161f6aff..17b248cf 100644 --- a/ARCHIVE/v/Valgrind/Valgrind-3.11.0-intel-2015b.eb +++ b/ARCHIVE/v/Valgrind/Valgrind-3.11.0-intel-2015b.eb @@ -23,13 +23,13 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = ['http://valgrind.org/downloads/'] sources = [SOURCELOWER_TAR_BZ2] -binaries = [ +local_binaries = [ 'callgrind_annotate', 'callgrind_control', 'cg_annotate', 'cg_diff', 'cg_merge', 'ms_print', 'valgrind', 'valgrind-listener', 'vgdb' ] sanity_check_paths = { - 'files': ['bin/%s' % x for x in binaries], + 'files': ['bin/%s' % x for x in local_binaries], 'dirs': [] } diff --git a/ARCHIVE/v/Valgrind/Valgrind-3.13.0-intel-2017b.eb b/ARCHIVE/v/Valgrind/Valgrind-3.13.0-intel-2017b.eb index db420ade..49d03f8a 100644 --- a/ARCHIVE/v/Valgrind/Valgrind-3.13.0-intel-2017b.eb +++ b/ARCHIVE/v/Valgrind/Valgrind-3.13.0-intel-2017b.eb @@ -11,13 +11,13 @@ toolchain = {'name': 'intel', 'version': '2017b'} source_urls = ['http://valgrind.org/downloads/'] sources = [SOURCELOWER_TAR_BZ2] -binaries = [ +local_binaries = [ 'callgrind_annotate', 'callgrind_control', 'cg_annotate', 'cg_diff', 'cg_merge', 'ms_print', 'valgrind', 'valgrind-listener', 'vgdb' ] sanity_check_paths = { - 'files': ['bin/%s' % x for x in binaries], + 'files': ['bin/%s' % x for x in local_binaries], 'dirs': [] } diff --git a/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2017b.eb b/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2017b.eb index 1410fc6d..5db6dc92 100644 --- a/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2017b.eb +++ b/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2017b.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_BZ2] configopts = ' --with-mpicc="$MPICC"' -binaries = [ +local_binaries = [ 'callgrind_annotate', 'callgrind_control', 'cg_annotate', 'cg_diff', 'cg_merge', 'ms_print', 'valgrind', 'valgrind-listener', 'vgdb' ] sanity_check_paths = { - 'files': ['bin/%s' % x for x in binaries], + 'files': ['bin/%s' % x for x in local_binaries], 'dirs': [] } diff --git a/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2019a.eb b/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2019a.eb index f8822ddb..77821cf7 100644 --- a/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2019a.eb +++ b/ARCHIVE/v/Valgrind/Valgrind-3.15.0-foss-2019a.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_BZ2] configopts = ' --with-mpicc="$MPICC"' -binaries = [ +local_binaries = [ 'callgrind_annotate', 'callgrind_control', 'cg_annotate', 'cg_diff', 'cg_merge', 'ms_print', 'valgrind', 'valgrind-listener', 'vgdb' ] sanity_check_paths = { - 'files': ['bin/%s' % x for x in binaries], + 'files': ['bin/%s' % x for x in local_binaries], 'dirs': [] } diff --git a/ARCHIVE/v/Valgrind/Valgrind-3.15.0-intel-2018.04.eb b/ARCHIVE/v/Valgrind/Valgrind-3.15.0-intel-2018.04.eb index af7b1efc..a6fd4cac 100644 --- a/ARCHIVE/v/Valgrind/Valgrind-3.15.0-intel-2018.04.eb +++ b/ARCHIVE/v/Valgrind/Valgrind-3.15.0-intel-2018.04.eb @@ -16,13 +16,13 @@ sources = [SOURCELOWER_TAR_BZ2] configopts = ' --with-mpicc="$MPICC"' -binaries = [ +local_binaries = [ 'callgrind_annotate', 'callgrind_control', 'cg_annotate', 'cg_diff', 'cg_merge', 'ms_print', 'valgrind', 'valgrind-listener', 'vgdb' ] sanity_check_paths = { - 'files': ['bin/%s' % x for x in binaries], + 'files': ['bin/%s' % x for x in local_binaries], 'dirs': [] } diff --git a/ARCHIVE/w/Whoosh/Whoosh-2.7.0-goolf-1.4.10-Python-2.7.3.eb b/ARCHIVE/w/Whoosh/Whoosh-2.7.0-goolf-1.4.10-Python-2.7.3.eb index 7eef489b..0a2cd366 100644 --- a/ARCHIVE/w/Whoosh/Whoosh-2.7.0-goolf-1.4.10-Python-2.7.3.eb +++ b/ARCHIVE/w/Whoosh/Whoosh-2.7.0-goolf-1.4.10-Python-2.7.3.eb @@ -3,7 +3,7 @@ easyblock = "PythonPackage" name = 'Whoosh' version = '2.7.0' -homepage = 'https://pypi.python.org/pypi/Whoosh/' +homepage = 'https://pypi.local_python.org/pypi/Whoosh/' description = """Fast, pure-Python full text indexing, search, and spell checking library.""" @@ -12,21 +12,21 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -python = "Python" +local_python = "Python" local_pyver = '2.7.3' local_pyshortver = ".".join(local_pyver.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, local_pyver) +versionsuffix = "-%s-%s" % (local_python, local_pyver) dependencies = [ - (python, local_pyver), + (local_python, local_pyver), ('numpy', '1.6.2', versionsuffix), ('scipy', '0.11.0', versionsuffix), ] sanity_check_paths = { 'files': [], - 'dirs': ['lib/python%s/site-packages' % local_pyshortver], + 'dirs': ['lib/local_python%s/site-packages' % local_pyshortver], } moduleclass = 'lib' diff --git a/ARCHIVE/x/X11/X11-20180604-foss-2017b.eb b/ARCHIVE/x/X11/X11-20180604-foss-2017b.eb index 0a48acca..3e96f1a6 100644 --- a/ARCHIVE/x/X11/X11-20180604-foss-2017b.eb +++ b/ARCHIVE/x/X11/X11-20180604-foss-2017b.eb @@ -271,7 +271,7 @@ preconfigopts = "if [ ! -f configure ]; then ./autogen.sh; fi && " # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [ diff --git a/ARCHIVE/x/XQilla/XQilla-2.3.2-foss-2015a.eb b/ARCHIVE/x/XQilla/XQilla-2.3.2-foss-2015a.eb index d7fbf953..51d549ab 100644 --- a/ARCHIVE/x/XQilla/XQilla-2.3.2-foss-2015a.eb +++ b/ARCHIVE/x/XQilla/XQilla-2.3.2-foss-2015a.eb @@ -17,10 +17,10 @@ source_urls = [ configopts = '--with-xerces=$EBROOTXERCESMINCPLUSPLUS' -xerces_version = '3.1.2' +local_xerces_version = '3.1.2' dependencies = [ - ('Xerces-C++', xerces_version), + ('Xerces-C++', local_xerces_version), ] moduleclass = 'lib' diff --git a/ARCHIVE/x/XQilla/XQilla-2.3.2-intel-2015a.eb b/ARCHIVE/x/XQilla/XQilla-2.3.2-intel-2015a.eb index 1fe03355..c51aa5d7 100644 --- a/ARCHIVE/x/XQilla/XQilla-2.3.2-intel-2015a.eb +++ b/ARCHIVE/x/XQilla/XQilla-2.3.2-intel-2015a.eb @@ -17,10 +17,10 @@ source_urls = [ configopts = '--with-xerces=$EBROOTXERCESMINCPLUSPLUS' -xerces_version = '3.1.2' +local_xerces_version = '3.1.2' dependencies = [ - ('Xerces-C++', xerces_version), + ('Xerces-C++', local_xerces_version), ] moduleclass = 'lib' diff --git a/ARCHIVE/x/xcb-proto/xcb-proto-1.11-intel-2015b-Python-2.7.9.eb b/ARCHIVE/x/xcb-proto/xcb-proto-1.11-intel-2015b-Python-2.7.9.eb index 607b9322..665bc8e2 100644 --- a/ARCHIVE/x/xcb-proto/xcb-proto-1.11-intel-2015b-Python-2.7.9.eb +++ b/ARCHIVE/x/xcb-proto/xcb-proto-1.11-intel-2015b-Python-2.7.9.eb @@ -12,16 +12,16 @@ toolchain = {'name': 'intel', 'version': '2015b'} source_urls = ['http://xcb.freedesktop.org/dist/'] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) -dependencies = [(python, local_pyver)] +versionsuffix = '-%s-%s' % (local_python, local_pyver) +dependencies = [(local_python, local_pyver)] local_pyshortver = '.'.join(local_pyver.split('.')[0:2]) sanity_check_paths = { 'files': ['lib/pkgconfig/xcb-proto.pc'], - 'dirs': ['lib/python%s/site-packages/xcbgen' % local_pyshortver] + 'dirs': ['lib/local_python%s/site-packages/xcbgen' % local_pyshortver] } moduleclass = 'devel' diff --git a/ARCHIVE/x/xcb/xcb-proto-1.11-Python-2.7.9.eb b/ARCHIVE/x/xcb/xcb-proto-1.11-Python-2.7.9.eb index fe71dda3..f7db03ab 100644 --- a/ARCHIVE/x/xcb/xcb-proto-1.11-Python-2.7.9.eb +++ b/ARCHIVE/x/xcb/xcb-proto-1.11-Python-2.7.9.eb @@ -12,16 +12,16 @@ toolchain = SYSTEM source_urls = ['http://xcb.freedesktop.org/dist/'] sources = [SOURCELOWER_TAR_GZ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.9' -versionsuffix = '-%s-%s' % (python, local_pyver) -dependencies = [(python, local_pyver)] +versionsuffix = '-%s-%s' % (local_python, local_pyver) +dependencies = [(local_python, local_pyver)] local_pyshortver = '.'.join(local_pyver.split('.')[0:2]) sanity_check_paths = { 'files': ['lib/pkgconfig/xcb-proto.pc'], - 'dirs': ['lib/python%s/site-packages/xcbgen' % local_pyshortver] + 'dirs': ['lib/local_python%s/site-packages/xcbgen' % local_pyshortver] } moduleclass = 'devel' diff --git a/ARCHIVE/y/Yade/Yade-1.20.0-foss-2016a-Python-2.7.11.eb b/ARCHIVE/y/Yade/Yade-1.20.0-foss-2016a-Python-2.7.11.eb index be68e7b1..ac463e43 100644 --- a/ARCHIVE/y/Yade/Yade-1.20.0-foss-2016a-Python-2.7.11.eb +++ b/ARCHIVE/y/Yade/Yade-1.20.0-foss-2016a-Python-2.7.11.eb @@ -15,16 +15,16 @@ toolchain = {'name': 'foss', 'version': '2016a'} source_urls = ['https://launchpad.net/yade/trunk/yade-1.00.0/+download/'] sources = [SOURCELOWER_TAR_GZ] -mesaver = '11.2.1' +local_mesaver = '11.2.1' dependencies = [ ('Boost', '1.60.0', versionsuffix), ('CGAL', '4.8', versionsuffix), ('Eigen', '3.2.7'), ('GDB', '7.10.1', versionsuffix), - ('GL2PS', '1.3.9', '-Mesa-%s' % mesaver), + ('GL2PS', '1.3.9', '-Mesa-%s' % local_mesaver), ('GTS', '0.7.6'), ('IPython', '3.2.3', versionsuffix), - ('libQGLViewer', '2.6.3', '-Mesa-%s' % mesaver), + ('libQGLViewer', '2.6.3', '-Mesa-%s' % local_mesaver), ('Loki', '0.1.7'), ('matplotlib', '1.5.1', versionsuffix + '-freetype-2.6.3'), ('minieigen', '0.5.3', versionsuffix), diff --git a/ARCHIVE/y/Yade/Yade-1.20.0-intel-2016a-Python-2.7.11.eb b/ARCHIVE/y/Yade/Yade-1.20.0-intel-2016a-Python-2.7.11.eb index ea0061a3..6ef1ef22 100644 --- a/ARCHIVE/y/Yade/Yade-1.20.0-intel-2016a-Python-2.7.11.eb +++ b/ARCHIVE/y/Yade/Yade-1.20.0-intel-2016a-Python-2.7.11.eb @@ -15,16 +15,16 @@ toolchain = {'name': 'intel', 'version': '2016a'} source_urls = ['https://launchpad.net/yade/trunk/yade-1.00.0/+download/'] sources = [SOURCELOWER_TAR_GZ] -mesaver = '11.2.1' +local_mesaver = '11.2.1' dependencies = [ ('Boost', '1.60.0', versionsuffix), ('CGAL', '4.8', versionsuffix), ('Eigen', '3.2.7'), ('GDB', '7.10.1', versionsuffix), - ('GL2PS', '1.3.9', '-Mesa-%s' % mesaver), + ('GL2PS', '1.3.9', '-Mesa-%s' % local_mesaver), ('GTS', '0.7.6'), ('IPython', '3.2.3', versionsuffix), - ('libQGLViewer', '2.6.3', '-Mesa-%s' % mesaver), + ('libQGLViewer', '2.6.3', '-Mesa-%s' % local_mesaver), ('Loki', '0.1.7'), ('matplotlib', '1.5.1', versionsuffix + '-freetype-2.6.3'), ('minieigen', '0.5.3', versionsuffix), diff --git a/a/ant/ant-1.8.4-Java-1.7.0_10.eb b/a/ant/ant-1.8.4-Java-1.7.0_10.eb index 281e8b90..c33b2f6f 100644 --- a/a/ant/ant-1.8.4-Java-1.7.0_10.eb +++ b/a/ant/ant-1.8.4-Java-1.7.0_10.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%s-%s-src.tar.gz' % (name, version)] source_urls = ['http://archive.apache.org/dist/%s/source/' % name] -java = 'Java' -javaver = '1.7.0_10' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_10' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.10', versionsuffix)] diff --git a/a/ant/ant-1.8.4-Java-1.7.0_21.eb b/a/ant/ant-1.8.4-Java-1.7.0_21.eb index b605f2f3..e87bd571 100644 --- a/a/ant/ant-1.8.4-Java-1.7.0_21.eb +++ b/a/ant/ant-1.8.4-Java-1.7.0_21.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%s-%s-src.tar.gz' % (name, version)] source_urls = ['http://archive.apache.org/dist/%s/source/' % name] -java = 'Java' -javaver = '1.7.0_21' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_21' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.10', versionsuffix)] diff --git a/a/ant/ant-1.9.0-Java-1.7.0_15.eb b/a/ant/ant-1.9.0-Java-1.7.0_15.eb index 428b0127..86f26a74 100644 --- a/a/ant/ant-1.9.0-Java-1.7.0_15.eb +++ b/a/ant/ant-1.9.0-Java-1.7.0_15.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%s-%s-src.tar.gz' % (name, version)] source_urls = ['http://archive.apache.org/dist/%s/source/' % name] -java = 'Java' -javaver = '1.7.0_15' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_15' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.11', versionsuffix)] diff --git a/a/ant/ant-1.9.0-Java-1.7.0_21.eb b/a/ant/ant-1.9.0-Java-1.7.0_21.eb index 83017963..cc15e52e 100644 --- a/a/ant/ant-1.9.0-Java-1.7.0_21.eb +++ b/a/ant/ant-1.9.0-Java-1.7.0_21.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%s-%s-src.tar.gz' % (name, version)] source_urls = ['http://archive.apache.org/dist/%s/source/' % name] -java = 'Java' -javaver = '1.7.0_21' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_21' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.11', versionsuffix)] diff --git a/a/ant/ant-1.9.3-Java-1.7.0_60.eb b/a/ant/ant-1.9.3-Java-1.7.0_60.eb index 41d07549..3690b614 100644 --- a/a/ant/ant-1.9.3-Java-1.7.0_60.eb +++ b/a/ant/ant-1.9.3-Java-1.7.0_60.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%(name)s-%(version)s-src.tar.gz'] source_urls = ['http://archive.apache.org/dist/%(name)s/source/'] -java = 'Java' -javaver = '1.7.0_60' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_60' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.11', versionsuffix)] diff --git a/a/ant/ant-1.9.3-Java-1.7.0_79.eb b/a/ant/ant-1.9.3-Java-1.7.0_79.eb index a846bcdd..5c54c6af 100644 --- a/a/ant/ant-1.9.3-Java-1.7.0_79.eb +++ b/a/ant/ant-1.9.3-Java-1.7.0_79.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%(name)s-%(version)s-src.tar.gz'] source_urls = ['http://archive.apache.org/dist/%(name)s/source/'] -java = 'Java' -javaver = '1.7.0_79' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_79' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.11', versionsuffix)] diff --git a/a/ant/ant-1.9.6-Java-1.7.0_75.eb b/a/ant/ant-1.9.6-Java-1.7.0_75.eb index 8bb461e9..1b508f37 100644 --- a/a/ant/ant-1.9.6-Java-1.7.0_75.eb +++ b/a/ant/ant-1.9.6-Java-1.7.0_75.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%(name)s-%(version)s-src.tar.gz'] source_urls = ['http://archive.apache.org/dist/%(name)s/source/'] -java = 'Java' -javaver = '1.7.0_75' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_75' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.11', versionsuffix)] diff --git a/a/ant/ant-1.9.6-Java-1.8.0_51.eb b/a/ant/ant-1.9.6-Java-1.8.0_51.eb index 7c9763ab..2c604a2b 100644 --- a/a/ant/ant-1.9.6-Java-1.8.0_51.eb +++ b/a/ant/ant-1.9.6-Java-1.8.0_51.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%(name)s-%(version)s-src.tar.gz'] source_urls = ['http://archive.apache.org/dist/%(name)s/source/'] -java = 'Java' -javaver = '1.8.0_51' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.8.0_51' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.11', versionsuffix)] diff --git a/a/ant/ant-1.9.6-Java-1.8.0_66.eb b/a/ant/ant-1.9.6-Java-1.8.0_66.eb index fb841d55..4da7d6a7 100644 --- a/a/ant/ant-1.9.6-Java-1.8.0_66.eb +++ b/a/ant/ant-1.9.6-Java-1.8.0_66.eb @@ -10,11 +10,11 @@ toolchain = SYSTEM sources = ['apache-%(name)s-%(version)s-src.tar.gz'] source_urls = ['http://archive.apache.org/dist/%(name)s/source/'] -java = 'Java' -javaver = '1.8.0_66' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.8.0_66' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] builddependencies = [('JUnit', '4.12', versionsuffix)] diff --git a/b/BLAT/BLAT-3.5-ictce-5.5.0-libpng-1.6.9.eb b/b/BLAT/BLAT-3.5-ictce-5.5.0-libpng-1.6.9.eb index eb9af1b7..ef21eeaa 100644 --- a/b/BLAT/BLAT-3.5-ictce-5.5.0-libpng-1.6.9.eb +++ b/b/BLAT/BLAT-3.5-ictce-5.5.0-libpng-1.6.9.eb @@ -18,11 +18,11 @@ toolchain = {'name': 'ictce', 'version': '5.5.0'} sources = ['%%(namelower)sSrc%s.zip' % ''.join(version.split('.'))] source_urls = ['http://users.soe.ucsc.edu/~kent/src'] -libpng = 'libpng' -libpng_ver = '1.6.9' -versionsuffix = '-%s-%s' % (libpng, libpng_ver) +local_libpng = 'local_libpng' +local_libpng_ver = '1.6.9' +versionsuffix = '-%s-%s' % (local_libpng, local_libpng_ver) -dependencies = [(libpng, libpng_ver)] +dependencies = [(local_libpng, local_libpng_ver)] buildopts = 'CC="$CC" COPT= L="$LIBS"' diff --git a/c/CFITSIO/CFITSIO-3.300-ictce-5.5.0.eb b/c/CFITSIO/CFITSIO-3.300-ictce-5.5.0.eb index 8c90ec64..ca213218 100644 --- a/c/CFITSIO/CFITSIO-3.300-ictce-5.5.0.eb +++ b/c/CFITSIO/CFITSIO-3.300-ictce-5.5.0.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'ictce', 'version': '5.5.0'} toolchainopts = {'pic': True} -srcversion = version.replace('.', '') +local_srcversion = version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ['lib/libcfitsio.a'], diff --git a/c/CFITSIO/CFITSIO-3.34-goolf-1.4.10.eb b/c/CFITSIO/CFITSIO-3.34-goolf-1.4.10.eb index 9a156bff..9c36c810 100644 --- a/c/CFITSIO/CFITSIO-3.34-goolf-1.4.10.eb +++ b/c/CFITSIO/CFITSIO-3.34-goolf-1.4.10.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'goolf', 'version': '1.4.10'} toolchainopts = {'optarch': True, 'pic': True} -srcversion = '%s0' % version.replace('.', '') +local_srcversion = '%s0' % version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ["lib/libcfitsio.a"], diff --git a/c/CFITSIO/CFITSIO-3.34-ictce-5.3.0.eb b/c/CFITSIO/CFITSIO-3.34-ictce-5.3.0.eb index bf8fb571..75fcfe45 100644 --- a/c/CFITSIO/CFITSIO-3.34-ictce-5.3.0.eb +++ b/c/CFITSIO/CFITSIO-3.34-ictce-5.3.0.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'ictce', 'version': '5.3.0'} toolchainopts = {'optarch': True, 'pic': True} -srcversion = '%s0' % version.replace('.', '') +local_srcversion = '%s0' % version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ["lib/libcfitsio.a"], diff --git a/c/CFITSIO/CFITSIO-3.34-ictce-5.5.0.eb b/c/CFITSIO/CFITSIO-3.34-ictce-5.5.0.eb index acdf7bfb..b723b973 100644 --- a/c/CFITSIO/CFITSIO-3.34-ictce-5.5.0.eb +++ b/c/CFITSIO/CFITSIO-3.34-ictce-5.5.0.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'ictce', 'version': '5.5.0'} toolchainopts = {'optarch': True, 'pic': True} -srcversion = '%s0' % version.replace('.', '') +local_srcversion = '%s0' % version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ["lib/libcfitsio.a"], diff --git a/c/CFITSIO/CFITSIO-3.350-ictce-5.5.0.eb b/c/CFITSIO/CFITSIO-3.350-ictce-5.5.0.eb index 177bb20d..d1822ef7 100644 --- a/c/CFITSIO/CFITSIO-3.350-ictce-5.5.0.eb +++ b/c/CFITSIO/CFITSIO-3.350-ictce-5.5.0.eb @@ -10,9 +10,9 @@ FITS (Flexible Image Transport System) data format.""" toolchain = {'name': 'ictce', 'version': '5.5.0'} toolchainopts = {'optarch': True, 'pic': True} -srcversion = '%s' % version.replace('.', '') +local_srcversion = '%s' % version.replace('.', '') source_urls = ['ftp://heasarc.gsfc.nasa.gov/software/fitsio/c/'] -sources = ['%%(namelower)s%s.tar.gz' % srcversion] +sources = ['%%(namelower)s%s.tar.gz' % local_srcversion] sanity_check_paths = { 'files': ["lib/libcfitsio.a"], diff --git a/c/CP2K/CP2K-3.0-CrayGNU-2015.11-cuda-7.0.eb b/c/CP2K/CP2K-3.0-CrayGNU-2015.11-cuda-7.0.eb index ed2ecd77..3dcddcda 100644 --- a/c/CP2K/CP2K-3.0-CrayGNU-2015.11-cuda-7.0.eb +++ b/c/CP2K/CP2K-3.0-CrayGNU-2015.11-cuda-7.0.eb @@ -1,8 +1,8 @@ # contributed by Luca Marsella (CSCS) name = 'CP2K' version = "3.0" -cudaversion = '7.0' -versionsuffix = '-cuda-%s' % cudaversion +local_cudaversion = '7.0' +versionsuffix = '-cuda-%s' % local_cudaversion homepage = 'http://www.cp2k.org/' description = """CP2K is a freely available (GPL) program, written in Fortran 95, to perform atomistic and molecular diff --git a/c/CubeGUI/CubeGUI-4.4.4-GCCcore-8.3.0.eb b/c/CubeGUI/CubeGUI-4.4.4-GCCcore-8.3.0.eb index 08f20430..7e9421d0 100644 --- a/c/CubeGUI/CubeGUI-4.4.4-GCCcore-8.3.0.eb +++ b/c/CubeGUI/CubeGUI-4.4.4-GCCcore-8.3.0.eb @@ -27,7 +27,7 @@ dependencies = [ ('Qt5', '5.13.1'), ] -config = '--enable-platform-mic --with-qt-specs=linux-icc-64 --with-frontend-local_compiler-suite=intel' +local_config = '--enable-platform-mic --with-qt-specs=linux-icc-64 --with-frontend-local_compiler-suite=intel' sanity_check_paths = { 'files': [], diff --git a/c/CubeGUI/CubeGUI-4.5-GCCcore-8.3.0.eb b/c/CubeGUI/CubeGUI-4.5-GCCcore-8.3.0.eb index be93f6bb..b0edc851 100644 --- a/c/CubeGUI/CubeGUI-4.5-GCCcore-8.3.0.eb +++ b/c/CubeGUI/CubeGUI-4.5-GCCcore-8.3.0.eb @@ -28,7 +28,7 @@ dependencies = [ ('Qt5', '5.13.1'), ] -config = '--enable-platform-mic --with-qt-specs=linux-icc-64 --with-frontend-local_compiler-suite=intel' +local_config = '--enable-platform-mic --with-qt-specs=linux-icc-64 --with-frontend-local_compiler-suite=intel' sanity_check_paths = { 'files': [], diff --git a/c/cairo/cairo-1.14.6.eb b/c/cairo/cairo-1.14.6.eb index cd194fcf..f23a4b76 100644 --- a/c/cairo/cairo-1.14.6.eb +++ b/c/cairo/cairo-1.14.6.eb @@ -13,7 +13,7 @@ toolchain = SYSTEM source_urls = ['http://cairographics.org/releases/'] sources = [SOURCE_TAR_XZ] -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ ('bzip2', '1.0.6'), @@ -23,7 +23,7 @@ dependencies = [ ('pixman', '0.34.0'), ('fontconfig', '2.11.1'), ('expat', '2.1.0'), - ('GLib', glibver), + ('GLib', local_glibver), ('libX11', '1.6.3'), ('libxcb', '1.11.1'), ('libXrender', '0.9.9'), diff --git a/c/cramtools/cramtools-2.0-Java-1.7.0_80.eb b/c/cramtools/cramtools-2.0-Java-1.7.0_80.eb index 1d2ff18a..ea7c1720 100644 --- a/c/cramtools/cramtools-2.0-Java-1.7.0_80.eb +++ b/c/cramtools/cramtools-2.0-Java-1.7.0_80.eb @@ -14,12 +14,12 @@ toolchain = SYSTEM sources = ['v%(version)s.tar.gz'] source_urls = ['https://github.com/enasequence/%(name)s/archive/'] -java = 'Java' -javaver = '1.7.0_80' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_80' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = "To execute cramtools run: java -jar \\${EBROOTCRAMTOOLS}/%(name)s-%(version)s.jar" +modloadmsg = "To execute cramtools run: local_java -jar \\${EBROOTCRAMTOOLS}/%(name)s-%(version)s.jar" sanity_check_paths = { 'files': ["%(name)s-%(version)s.jar"], diff --git a/c/cuDNN/cuDNN-5.1-CUDA-7.5.18.eb b/c/cuDNN/cuDNN-5.1-CUDA-7.5.18.eb index 2ff49e65..9539a4eb 100644 --- a/c/cuDNN/cuDNN-5.1-CUDA-7.5.18.eb +++ b/c/cuDNN/cuDNN-5.1-CUDA-7.5.18.eb @@ -7,9 +7,9 @@ easyblock = 'Tarball' name = 'cuDNN' version = '5.1' -cuda_version = '7.5.18' +local_cuda_version = '7.5.18' -versionsuffix = '-CUDA-%s' % cuda_version +versionsuffix = '-CUDA-%s' % local_cuda_version homepage = 'https://developer.nvidia.com/cudnn' description = """The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for @@ -21,7 +21,7 @@ toolchain = SYSTEM # Download link: https://developer.nvidia.com/rdp/cudnn-download sources = ['%(namelower)s-8.0-linux-x64-v%(version)s.tgz'] -dependencies = [('CUDA', cuda_version)] +dependencies = [('CUDA', local_cuda_version)] # checksums = [ # '099ca6a9b21b35e32f3408eff2a1c06d', # cudnn-8.0-linux-x64-v5.1.tgz diff --git a/c/cuDNN/cuDNN-5.1-CUDA-8.0.44.eb b/c/cuDNN/cuDNN-5.1-CUDA-8.0.44.eb index a722bb86..50fe5e11 100644 --- a/c/cuDNN/cuDNN-5.1-CUDA-8.0.44.eb +++ b/c/cuDNN/cuDNN-5.1-CUDA-8.0.44.eb @@ -7,9 +7,9 @@ easyblock = 'Tarball' name = 'cuDNN' version = '5.1' -cuda_version = '8.0.44' +local_cuda_version = '8.0.44' -versionsuffix = '-CUDA-%s' % cuda_version +versionsuffix = '-CUDA-%s' % local_cuda_version homepage = 'https://developer.nvidia.com/cudnn' description = """The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for @@ -21,7 +21,7 @@ toolchain = SYSTEM # Download link: https://developer.nvidia.com/rdp/cudnn-download sources = ['%(namelower)s-8.0-linux-x64-v%(version)s.tgz'] -dependencies = [('CUDA', cuda_version)] +dependencies = [('CUDA', local_cuda_version)] # checksums = [ # '099ca6a9b21b35e32f3408eff2a1c06d', # cudnn-8.0-linux-x64-v5.1.tgz diff --git a/c/cuDNN/cuDNN-7.0.5-CUDA-9.0.176.eb b/c/cuDNN/cuDNN-7.0.5-CUDA-9.0.176.eb index 0e788d71..e8bb88c1 100644 --- a/c/cuDNN/cuDNN-7.0.5-CUDA-9.0.176.eb +++ b/c/cuDNN/cuDNN-7.0.5-CUDA-9.0.176.eb @@ -2,9 +2,9 @@ easyblock = 'Tarball' name = 'cuDNN' version = '7.0.5' -cuda_version = '9.0.176' +local_cuda_version = '9.0.176' -versionsuffix = '-CUDA-%s' % cuda_version +versionsuffix = '-CUDA-%s' % local_cuda_version homepage = 'https://developer.nvidia.com/cudnn' description = """The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for @@ -16,7 +16,7 @@ toolchain = SYSTEM # Download link: https://developer.nvidia.com/rdp/cudnn-download sources = ['cudnn-9.0-linux-x64-v7.tar.gz'] -dependencies = [('CUDA', cuda_version)] +dependencies = [('CUDA', local_cuda_version)] # checksums = [ # '099ca6a9b21b35e32f3408eff2a1c06d', # cudnn-8.0-linux-x64-v5.1.tgz diff --git a/c/cuDNN/cuDNN-7.1-CUDA-9.1.85.eb b/c/cuDNN/cuDNN-7.1-CUDA-9.1.85.eb index cdfb6f5a..96ab8d9b 100644 --- a/c/cuDNN/cuDNN-7.1-CUDA-9.1.85.eb +++ b/c/cuDNN/cuDNN-7.1-CUDA-9.1.85.eb @@ -2,9 +2,9 @@ easyblock = 'Tarball' name = 'cuDNN' version = '7.41' -cuda_version = '9.1.85' +local_cuda_version = '9.1.85' -versionsuffix = '-CUDA-%s' % cuda_version +versionsuffix = '-CUDA-%s' % local_cuda_version homepage = 'https://developer.nvidia.com/cudnn' description = """The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for @@ -16,7 +16,7 @@ toolchain = SYSTEM # Download link: https://developer.nvidia.com/rdp/cudnn-download sources = ['cudnn-9.1-linux-x64-v7.1.tgz'] -dependencies = [('CUDA', cuda_version)] +dependencies = [('CUDA', local_cuda_version)] sanity_check_paths = { 'files': ['include/cudnn.h', 'lib64/libcudnn_static.a'], diff --git a/c/cuDNN/cuDNN-7.1-CUDA-9.2.88.eb b/c/cuDNN/cuDNN-7.1-CUDA-9.2.88.eb index 25c368f3..1ed08cde 100644 --- a/c/cuDNN/cuDNN-7.1-CUDA-9.2.88.eb +++ b/c/cuDNN/cuDNN-7.1-CUDA-9.2.88.eb @@ -4,9 +4,9 @@ easyblock = 'Tarball' name = 'cuDNN' version = '7.41' -cuda_version = '9.2.88' +local_cuda_version = '9.2.88' -versionsuffix = '-CUDA-%s' % cuda_version +versionsuffix = '-CUDA-%s' % local_cuda_version homepage = 'https://developer.nvidia.com/cudnn' description = """The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for @@ -18,7 +18,7 @@ toolchain = SYSTEM # Download link: https://developer.nvidia.com/rdp/cudnn-download sources = ['cudnn-9.1-linux-x64-v7.1.tgz'] -dependencies = [('CUDA', cuda_version)] +dependencies = [('CUDA', local_cuda_version)] sanity_check_paths = { 'files': ['include/cudnn.h', 'lib64/libcudnn_static.a'], diff --git a/c/cuDNN/cuDNN-7.5.0.56-CUDA-10.0.130.eb b/c/cuDNN/cuDNN-7.5.0.56-CUDA-10.0.130.eb index 0dbcc578..86488dce 100644 --- a/c/cuDNN/cuDNN-7.5.0.56-CUDA-10.0.130.eb +++ b/c/cuDNN/cuDNN-7.5.0.56-CUDA-10.0.130.eb @@ -4,9 +4,9 @@ easyblock = 'Tarball' name = 'cuDNN' version = '7.5.0.56' -cuda_version = '10.0.130' +local_cuda_version = '10.0.130' -versionsuffix = '-CUDA-%s' % cuda_version +versionsuffix = '-CUDA-%s' % local_cuda_version homepage = 'https://developer.nvidia.com/cudnn' description = """The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for @@ -18,7 +18,7 @@ toolchain = SYSTEM # Download link: https://developer.nvidia.com/rdp/cudnn-download sources = ['cudnn-10.0-linux-x64-v7.5.0.56.tgz'] -dependencies = [('CUDA', cuda_version)] +dependencies = [('CUDA', local_cuda_version)] sanity_check_paths = { 'files': ['include/cudnn.h', 'lib64/libcudnn_static.a'], diff --git a/c/cuDNN/cuDNN-7.6.3.30-CUDA-10.0.130.eb b/c/cuDNN/cuDNN-7.6.3.30-CUDA-10.0.130.eb index 18676dd5..1e483696 100644 --- a/c/cuDNN/cuDNN-7.6.3.30-CUDA-10.0.130.eb +++ b/c/cuDNN/cuDNN-7.6.3.30-CUDA-10.0.130.eb @@ -4,9 +4,9 @@ easyblock = 'Tarball' name = 'cuDNN' version = '7.6.3.30' -cuda_version = '10.0.130' +local_cuda_version = '10.0.130' -versionsuffix = '-CUDA-%s' % cuda_version +versionsuffix = '-CUDA-%s' % local_cuda_version homepage = 'https://developer.nvidia.com/cudnn' description = """The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for @@ -18,7 +18,7 @@ toolchain = SYSTEM # Download link: https://developer.nvidia.com/rdp/cudnn-download sources = ['cudnn-10.0-linux-x64-v7.6.3.30.tgz'] -dependencies = [('CUDA', cuda_version)] +dependencies = [('CUDA', local_cuda_version)] sanity_check_paths = { 'files': ['include/cudnn.h', 'lib64/libcudnn_static.a'], diff --git a/f/FFTW/FFTW-2.1.5-gompi-1.5.12.eb b/f/FFTW/FFTW-2.1.5-gompi-1.5.12.eb index 91a88e0d..021aa0b8 100644 --- a/f/FFTW/FFTW-2.1.5-gompi-1.5.12.eb +++ b/f/FFTW/FFTW-2.1.5-gompi-1.5.12.eb @@ -13,11 +13,11 @@ toolchainopts = {'optarch': True, 'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-shared --enable-type-prefix --enable-threads --with-pic" +local_common_configopts = "--enable-shared --enable-type-prefix --enable-threads --with-pic" configopts = [ - common_configopts + " --enable-float --enable-mpi", - common_configopts + " --enable-mpi", # default as last + local_common_configopts + " --enable-float --enable-mpi", + local_common_configopts + " --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/f/FFTW/FFTW-3.3.4-gompi-2015g.eb b/f/FFTW/FFTW-3.3.4-gompi-2015g.eb index 6db4ed7b..82054217 100644 --- a/f/FFTW/FFTW-3.3.4-gompi-2015g.eb +++ b/f/FFTW/FFTW-3.3.4-gompi-2015g.eb @@ -13,13 +13,13 @@ toolchainopts = {'optarch': True, 'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-quad-precision", - common_configopts + " --enable-avx --enable-mpi", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-quad-precision", + local_common_configopts + " --enable-avx --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/f/FFTW/FFTW-3.3.5-gompi-2016a.eb b/f/FFTW/FFTW-3.3.5-gompi-2016a.eb index 22ad7761..3a5e3ac9 100644 --- a/f/FFTW/FFTW-3.3.5-gompi-2016a.eb +++ b/f/FFTW/FFTW-3.3.5-gompi-2016a.eb @@ -15,13 +15,13 @@ toolchainopts = {'optarch': True, 'pic': True} sources = [SOURCELOWER_TAR_GZ] source_urls = [homepage] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-quad-precision", - common_configopts + " --enable-sse2 --enable-mpi", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-quad-precision", + local_common_configopts + " --enable-sse2 --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/f/FFTW/FFTW-3.3.6-gompi-2017a-it4i.eb b/f/FFTW/FFTW-3.3.6-gompi-2017a-it4i.eb index ff1926e2..f14e3f4f 100644 --- a/f/FFTW/FFTW-3.3.6-gompi-2017a-it4i.eb +++ b/f/FFTW/FFTW-3.3.6-gompi-2017a-it4i.eb @@ -14,13 +14,13 @@ source_urls = [homepage] sources = ['fftw-%(version)s-pl1.tar.gz'] checksums = ['682a0e78d6966ca37c7446d4ab4cc2a1'] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-long-double --enable-mpi", - common_configopts + " --enable-quad-precision", - common_configopts + " --enable-sse2 --enable-mpi", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-long-double --enable-mpi", + local_common_configopts + " --enable-quad-precision", + local_common_configopts + " --enable-sse2 --enable-mpi", # default as last ] sanity_check_paths = { diff --git a/f/FFTW/FFTW-3.3.7-GCC-6.3.0-2.27.eb b/f/FFTW/FFTW-3.3.7-GCC-6.3.0-2.27.eb index 5f8a7282..3e399e9d 100644 --- a/f/FFTW/FFTW-3.3.7-GCC-6.3.0-2.27.eb +++ b/f/FFTW/FFTW-3.3.7-GCC-6.3.0-2.27.eb @@ -15,13 +15,13 @@ toolchainopts = {'optarch': True, 'pic': True} source_urls = [homepage] sources = ['fftw-%(version)s.tar.gz'] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" configopts = [ - common_configopts + " --enable-single --enable-sse2 ", - common_configopts + " --enable-quad-precision", - common_configopts + " --enable-long-double ", - common_configopts + " --enable-sse2 ", # default as last + local_common_configopts + " --enable-single --enable-sse2 ", + local_common_configopts + " --enable-quad-precision", + local_common_configopts + " --enable-long-double ", + local_common_configopts + " --enable-sse2 ", # default as last ] diff --git a/f/FFTW/FFTW-3.3.8-GCC-8.1.0-2.30.eb b/f/FFTW/FFTW-3.3.8-GCC-8.1.0-2.30.eb index 0637443d..96abd7c6 100644 --- a/f/FFTW/FFTW-3.3.8-GCC-8.1.0-2.30.eb +++ b/f/FFTW/FFTW-3.3.8-GCC-8.1.0-2.30.eb @@ -15,13 +15,13 @@ toolchainopts = {'optarch': True, 'pic': True} source_urls = [homepage] sources = ['fftw-%(version)s.tar.gz'] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" configopts = [ - common_configopts + " --enable-single --enable-sse2 ", - common_configopts + " --enable-quad-precision", - common_configopts + " --enable-long-double ", - common_configopts + " --enable-sse2 ", # default as last + local_common_configopts + " --enable-single --enable-sse2 ", + local_common_configopts + " --enable-quad-precision", + local_common_configopts + " --enable-long-double ", + local_common_configopts + " --enable-sse2 ", # default as last ] diff --git a/f/FFTW/FFTW-3.3.8-gompi-2019.02.eb b/f/FFTW/FFTW-3.3.8-gompi-2019.02.eb index 28b98f55..de9c7523 100644 --- a/f/FFTW/FFTW-3.3.8-gompi-2019.02.eb +++ b/f/FFTW/FFTW-3.3.8-gompi-2019.02.eb @@ -15,13 +15,13 @@ toolchainopts = {'optarch': True, 'pic': True} source_urls = [homepage] sources = ['fftw-%(version)s.tar.gz'] -common_configopts = "--enable-threads --enable-openmp --with-pic" +local_common_configopts = "--enable-threads --enable-openmp --with-pic" configopts = [ - common_configopts + " --enable-single --enable-sse2 --enable-mpi", - common_configopts + " --enable-quad-precision", - common_configopts + " --enable-long-double ", - common_configopts + " --enable-sse2 ", # default as last + local_common_configopts + " --enable-single --enable-sse2 --enable-mpi", + local_common_configopts + " --enable-quad-precision", + local_common_configopts + " --enable-long-double ", + local_common_configopts + " --enable-sse2 ", # default as last ] diff --git a/f/fastQValidator/fastQValidator-0.1.1a-20151214-goolf-1.7.20-aadc6f9.eb b/f/fastQValidator/fastQValidator-0.1.1a-20151214-goolf-1.7.20-aadc6f9.eb index fe001b9f..356b2c0f 100644 --- a/f/fastQValidator/fastQValidator-0.1.1a-20151214-goolf-1.7.20-aadc6f9.eb +++ b/f/fastQValidator/fastQValidator-0.1.1a-20151214-goolf-1.7.20-aadc6f9.eb @@ -7,9 +7,9 @@ easyblock = 'MakeCp' name = 'fastQValidator' version = '0.1.1a-20151214' -fastqvalidator_git_commit = 'aadc6f9' -libstatgen_git_commit = '8246906' -versionsuffix = '-%s' % fastqvalidator_git_commit +local_fastqvalidator_git_commit = 'aadc6f9' +local_libstatgen_git_commit = '8246906' +versionsuffix = '-%s' % local_fastqvalidator_git_commit homepage = 'http://genome.sph.umich.edu/wiki/FastQValidator' description = """Validate FastQ Files""" @@ -25,8 +25,8 @@ source_urls = [ ] sources = [ - '%s.tar.gz' % fastqvalidator_git_commit, - '%s.tar.gz' % libstatgen_git_commit + '%s.tar.gz' % local_fastqvalidator_git_commit, + '%s.tar.gz' % local_libstatgen_git_commit ] dependencies = [ diff --git a/f/freetype/freetype-2.7.1-libpng-1.6.29.eb b/f/freetype/freetype-2.7.1-libpng-1.6.29.eb index 33b0a9b2..23e1da35 100644 --- a/f/freetype/freetype-2.7.1-libpng-1.6.29.eb +++ b/f/freetype/freetype-2.7.1-libpng-1.6.29.eb @@ -11,9 +11,9 @@ toolchain = SYSTEM source_urls = [GNU_SAVANNAH_SOURCE] sources = [SOURCE_TAR_GZ] -libpngver = '1.6.29' -versionsuffix = '-libpng-%s' % libpngver -dependencies = [('libpng', libpngver)] +local_libpngver = '1.6.29' +versionsuffix = '-libpng-%s' % local_libpngver +dependencies = [('libpng', local_libpngver)] sanity_check_paths = { 'files': [ diff --git a/f/freetype/freetype-2.9.1-libpng-1.6.34.eb b/f/freetype/freetype-2.9.1-libpng-1.6.34.eb index 85545383..de8086b4 100644 --- a/f/freetype/freetype-2.9.1-libpng-1.6.34.eb +++ b/f/freetype/freetype-2.9.1-libpng-1.6.34.eb @@ -11,9 +11,9 @@ toolchain = SYSTEM source_urls = [GNU_SAVANNAH_SOURCE] sources = [SOURCE_TAR_GZ] -libpngver = '1.6.34' -versionsuffix = '-libpng-%s' % libpngver -dependencies = [('libpng', libpngver)] +local_libpngver = '1.6.34' +versionsuffix = '-libpng-%s' % local_libpngver +dependencies = [('libpng', local_libpngver)] sanity_check_paths = { 'files': [ diff --git a/g/GATK/GATK-2.5-2-Java-1.7.0_10.eb b/g/GATK/GATK-2.5-2-Java-1.7.0_10.eb index 1f2139e3..f5963482 100644 --- a/g/GATK/GATK-2.5-2-Java-1.7.0_10.eb +++ b/g/GATK/GATK-2.5-2-Java-1.7.0_10.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_10' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_10' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-2.6-5-Java-1.7.0_10.eb b/g/GATK/GATK-2.6-5-Java-1.7.0_10.eb index de3241b1..dcefcd34 100644 --- a/g/GATK/GATK-2.6-5-Java-1.7.0_10.eb +++ b/g/GATK/GATK-2.6-5-Java-1.7.0_10.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_10' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_10' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-2.6-5-Java-1.7.0_79.eb b/g/GATK/GATK-2.6-5-Java-1.7.0_79.eb index 8463d71a..1cfcb2c9 100644 --- a/g/GATK/GATK-2.6-5-Java-1.7.0_79.eb +++ b/g/GATK/GATK-2.6-5-Java-1.7.0_79.eb @@ -15,12 +15,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_79' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_79' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modaliases = {'gatk': "java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar"} +modaliases = {'gatk': "local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar"} sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-2.7-4-Java-1.7.0_10.eb b/g/GATK/GATK-2.7-4-Java-1.7.0_10.eb index 0176029d..356884e0 100644 --- a/g/GATK/GATK-2.7-4-Java-1.7.0_10.eb +++ b/g/GATK/GATK-2.7-4-Java-1.7.0_10.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_10' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_10' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-2.8-1-Java-1.7.0_10.eb b/g/GATK/GATK-2.8-1-Java-1.7.0_10.eb index 254a0034..a4ca05f9 100644 --- a/g/GATK/GATK-2.8-1-Java-1.7.0_10.eb +++ b/g/GATK/GATK-2.8-1-Java-1.7.0_10.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_10' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_10' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-3.3-0-Java-1.7.0_21.eb b/g/GATK/GATK-3.3-0-Java-1.7.0_21.eb index ceb5436e..1215f04f 100644 --- a/g/GATK/GATK-3.3-0-Java-1.7.0_21.eb +++ b/g/GATK/GATK-3.3-0-Java-1.7.0_21.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_21' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_21' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-3.3-0-Java-1.7.0_80.eb b/g/GATK/GATK-3.3-0-Java-1.7.0_80.eb index 1da5bb85..0cb3b96d 100644 --- a/g/GATK/GATK-3.3-0-Java-1.7.0_80.eb +++ b/g/GATK/GATK-3.3-0-Java-1.7.0_80.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_80' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_80' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-3.3-0-Java-1.8.0_66.eb b/g/GATK/GATK-3.3-0-Java-1.8.0_66.eb index 426671b6..7f5e675b 100644 --- a/g/GATK/GATK-3.3-0-Java-1.8.0_66.eb +++ b/g/GATK/GATK-3.3-0-Java-1.8.0_66.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.8.0_66' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.8.0_66' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-3.5-Java-1.7.0_79.eb b/g/GATK/GATK-3.5-Java-1.7.0_79.eb index bea974a1..cb4150ab 100644 --- a/g/GATK/GATK-3.5-Java-1.7.0_79.eb +++ b/g/GATK/GATK-3.5-Java-1.7.0_79.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.7.0_79' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_79' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GATK/GATK-3.5-Java-1.8.0_66.eb b/g/GATK/GATK-3.5-Java-1.8.0_66.eb index dedac54a..bd7397a4 100644 --- a/g/GATK/GATK-3.5-Java-1.8.0_66.eb +++ b/g/GATK/GATK-3.5-Java-1.8.0_66.eb @@ -27,12 +27,12 @@ toolchain = SYSTEM # download manually from http://www.broadinstitute.org/gatk/download sources = ['GenomeAnalysisTK-%(version)s.tar.bz2'] -java = 'Java' -javaver = '1.8.0_66' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.8.0_66' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute GATK run: java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" +modloadmsg = """To execute GATK run: local_java -jar \\$EBROOTGATK/GenomeAnalysisTK.jar""" sanity_check_paths = { 'files': ["GenomeAnalysisTK.jar"], diff --git a/g/GC3Pie/GC3Pie-2.2.3.eb b/g/GC3Pie/GC3Pie-2.2.3.eb index b7de7841..68423909 100644 --- a/g/GC3Pie/GC3Pie-2.2.3.eb +++ b/g/GC3Pie/GC3Pie-2.2.3.eb @@ -102,7 +102,7 @@ modextrapaths = { # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': ['bin/gc3utils'], diff --git a/g/GC3Pie/GC3Pie-2.3.eb b/g/GC3Pie/GC3Pie-2.3.eb index e319cdea..41ab1e66 100644 --- a/g/GC3Pie/GC3Pie-2.3.eb +++ b/g/GC3Pie/GC3Pie-2.3.eb @@ -102,14 +102,14 @@ modextrapaths = { # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True -eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver +local_eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver sanity_check_paths = { 'files': [ 'bin/gc3utils', ('lib/python%s/site-packages/%s' % - (local_pyver, eggname), 'lib64/python%s/site-packages/%s' % - (local_pyver, eggname))], 'dirs': [], } + (local_pyver, local_eggname), 'lib64/python%s/site-packages/%s' % + (local_pyver, local_eggname))], 'dirs': [], } sanity_check_commands = [('gc3utils', 'info --version')] diff --git a/g/GC3Pie/GC3Pie-2.4.0.eb b/g/GC3Pie/GC3Pie-2.4.0.eb index ba635a07..0d855799 100644 --- a/g/GC3Pie/GC3Pie-2.4.0.eb +++ b/g/GC3Pie/GC3Pie-2.4.0.eb @@ -102,14 +102,14 @@ modextrapaths = { # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True -eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver +local_eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver sanity_check_paths = { 'files': [ 'bin/gc3utils', ('lib/python%s/site-packages/%s' % - (local_pyver, eggname), 'lib64/python%s/site-packages/%s' % - (local_pyver, eggname))], 'dirs': [], } + (local_pyver, local_eggname), 'lib64/python%s/site-packages/%s' % + (local_pyver, local_eggname))], 'dirs': [], } sanity_check_commands = [('gc3utils', 'info --version')] diff --git a/g/GC3Pie/GC3Pie-2.4.1.eb b/g/GC3Pie/GC3Pie-2.4.1.eb index c0441934..89d3ddd1 100644 --- a/g/GC3Pie/GC3Pie-2.4.1.eb +++ b/g/GC3Pie/GC3Pie-2.4.1.eb @@ -102,14 +102,14 @@ modextrapaths = { # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True -eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver +local_eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver sanity_check_paths = { 'files': [ 'bin/gc3utils', ('lib/python%s/site-packages/%s' % - (local_pyver, eggname), 'lib64/python%s/site-packages/%s' % - (local_pyver, eggname))], 'dirs': [], } + (local_pyver, local_eggname), 'lib64/python%s/site-packages/%s' % + (local_pyver, local_eggname))], 'dirs': [], } sanity_check_commands = [('gc3utils', 'info --version')] diff --git a/g/GC3Pie/GC3Pie-2.4.2.eb b/g/GC3Pie/GC3Pie-2.4.2.eb index 62df7222..a556a109 100644 --- a/g/GC3Pie/GC3Pie-2.4.2.eb +++ b/g/GC3Pie/GC3Pie-2.4.2.eb @@ -102,14 +102,14 @@ modextrapaths = { # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True -eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver +local_eggname = 'gc3pie-%%(version)s-py%s.egg' % local_pyver sanity_check_paths = { 'files': [ 'bin/gc3utils', ('lib/python%s/site-packages/%s' % - (local_pyver, eggname), 'lib64/python%s/site-packages/%s' % - (local_pyver, eggname))], 'dirs': [], } + (local_pyver, local_eggname), 'lib64/python%s/site-packages/%s' % + (local_pyver, local_eggname))], 'dirs': [], } sanity_check_commands = [('gc3utils', 'info --version')] diff --git a/g/GCC/GCC-4.8.3.eb b/g/GCC/GCC-4.8.3.eb index 2229e518..cf6428af 100644 --- a/g/GCC/GCC-4.8.3.eb +++ b/g/GCC/GCC-4.8.3.eb @@ -36,7 +36,7 @@ maxparallel = 4 moduleclass = 'compiler' -opt = True +local_opt = True # Salomon specific optimalization modextravars = { diff --git a/g/GCC/GCC-5.3.1-snapshot-20160419-2.25.eb b/g/GCC/GCC-5.3.1-snapshot-20160419-2.25.eb index 945ff5aa..6556e7d9 100644 --- a/g/GCC/GCC-5.3.1-snapshot-20160419-2.25.eb +++ b/g/GCC/GCC-5.3.1-snapshot-20160419-2.25.eb @@ -2,9 +2,9 @@ easyblock = 'Bundle' name = 'GCC' version = '5.3.1' -snapshot = '20160419' +local_snapshot = '20160419' local_local_binutilsver = '2.25' -versionsuffix = '-snapshot-%s-%s' % (snapshot, local_local_binutilsver) +versionsuffix = '-local_snapshot-%s-%s' % (local_snapshot, local_local_binutilsver) homepage = 'http://gcc.gnu.org/' description = """The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, @@ -13,10 +13,10 @@ description = """The GNU Compiler Collection includes front ends for C, C++, Obj toolchain = SYSTEM dependencies = [ - ('GCCcore', version, '-snapshot-%s' % snapshot), + ('GCCcore', version, '-local_snapshot-%s' % local_snapshot), # local_binutils built on top of GCCcore, which was built on top of # (dummy-built) local_binutils - ('binutils', local_local_binutilsver, '', ('GCCcore', '%s-snapshot-%s' % (version, snapshot))), + ('binutils', local_local_binutilsver, '', ('GCCcore', '%s-local_snapshot-%s' % (version, local_snapshot))), ] altroot = 'GCCcore' diff --git a/g/GCCcore/GCCcore-4.9.2.eb b/g/GCCcore/GCCcore-4.9.2.eb index 193f8764..4226f190 100644 --- a/g/GCCcore/GCCcore-4.9.2.eb +++ b/g/GCCcore/GCCcore-4.9.2.eb @@ -10,7 +10,7 @@ description = """The GNU Compiler Collection includes front ends for C, C++, Obj toolchain = SYSTEM local_mpfr_version = '3.1.2' -gcc_name = 'GCC' +local_gcc_name = 'GCC' source_urls = [ 'http://ftpmirror.gnu.org/gcc/gcc-%s' % version, # GCC auto-resolving HTTP mirror @@ -19,7 +19,7 @@ source_urls = [ 'http://www.multiprecision.org/mpc/download', # MPC official ] sources = [ - '%s-%s.tar.bz2' % (gcc_name.lower(), version), + '%s-%s.tar.bz2' % (local_gcc_name.lower(), version), 'gmp-6.0.0a.tar.bz2', 'mpfr-%s.tar.gz' % local_mpfr_version, 'mpc-1.0.2.tar.gz', diff --git a/g/GCCcore/GCCcore-5.3.1-snapshot-20160419.eb b/g/GCCcore/GCCcore-5.3.1-snapshot-20160419.eb index a73411b9..5de2f385 100644 --- a/g/GCCcore/GCCcore-5.3.1-snapshot-20160419.eb +++ b/g/GCCcore/GCCcore-5.3.1-snapshot-20160419.eb @@ -2,8 +2,8 @@ easyblock = 'EB_GCC' name = 'GCCcore' version = '5.3.1' -snapshot = '20160419' -versionsuffix = '-snapshot-%s' % snapshot +local_snapshot = '20160419' +versionsuffix = '-local_snapshot-%s' % local_snapshot homepage = 'http://gcc.gnu.org/' description = """The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, @@ -12,7 +12,7 @@ description = """The GNU Compiler Collection includes front ends for C, C++, Obj toolchain = SYSTEM local_mpfr_version = '3.1.3' -gcc_name = 'GCC' +local_gcc_name = 'GCC' source_urls = [ 'http://gcc.parentingamerica.com/snapshots/LATEST-5/', @@ -22,7 +22,7 @@ source_urls = [ 'http://www.multiprecision.org/mpc/download', # MPC official ] sources = [ - 'gcc-5-%s.tar.bz2' % snapshot, + 'gcc-5-%s.tar.bz2' % local_snapshot, 'gmp-6.1.0.tar.bz2', 'mpfr-%s.tar.gz' % local_mpfr_version, 'mpc-1.0.3.tar.gz', diff --git a/g/Gdk-Pixbuf/Gdk-Pixbuf-2.32.3.eb b/g/Gdk-Pixbuf/Gdk-Pixbuf-2.32.3.eb index cddb76bf..b02dbdc3 100644 --- a/g/Gdk-Pixbuf/Gdk-Pixbuf-2.32.3.eb +++ b/g/Gdk-Pixbuf/Gdk-Pixbuf-2.32.3.eb @@ -16,9 +16,9 @@ toolchain = SYSTEM source_urls = [FTPGNOME_SOURCE] sources = [SOURCELOWER_TAR_XZ] -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ - ('GLib', glibver), + ('GLib', local_glibver), ('libjpeg-turbo', '1.5.1'), ('libpng', '1.6.29'), ('LibTIFF', '4.0.7'), diff --git a/g/gencore_variant_detection/gencore_variant_detection-1.0.eb b/g/gencore_variant_detection/gencore_variant_detection-1.0.eb index d449446f..c5be5972 100644 --- a/g/gencore_variant_detection/gencore_variant_detection-1.0.eb +++ b/g/gencore_variant_detection/gencore_variant_detection-1.0.eb @@ -14,10 +14,10 @@ easyblock = 'Conda' name = "gencore_variant_detection" version = "1.0" -variant = "Linux-x86_64" +local_variant = "Linux-x86_64" homepage = "https://nyuad-cgsb.github.io/variant_detection/public/index.html" -description = """ This is a bundled install of many software packages for doing variant detection analysis. """ +description = """ This is a bundled install of many software packages for doing local_variant detection analysis. """ toolchain = SYSTEM diff --git a/g/gnutls/gnutls-3.4.7-GNU-4.9.3-2.25.eb b/g/gnutls/gnutls-3.4.7-GNU-4.9.3-2.25.eb index 50f5da2e..fc21aa14 100644 --- a/g/gnutls/gnutls-3.4.7-GNU-4.9.3-2.25.eb +++ b/g/gnutls/gnutls-3.4.7-GNU-4.9.3-2.25.eb @@ -16,12 +16,12 @@ toolchain = {'name': 'GNU', 'version': '4.9.3-2.25'} source_urls = ['ftp://ftp.gnutls.org/gcrypt/gnutls/v%(version_major_minor)s'] sources = [SOURCE_TAR_XZ] -guilever = '1.8.8' -guileshortver = '.'.join(guilever.split('.')[:2]) +local_guilever = '1.8.8' +local_guileshortver = '.'.join(local_guilever.split('.')[:2]) dependencies = [ ('GMP', '6.0.0a'), ('nettle', '3.1.1'), - ('guile', guilever), + ('guile', local_guilever), ('libtasn1', '4.7'), ('libidn', '1.32'), ('p11-kit', '0.23.2'), @@ -52,7 +52,7 @@ sanity_check_paths = { SHLIB_EXT]] + [ 'lib/guile/%s/guile-gnutls-v-2.so' % - guileshortver], + local_guileshortver], 'dirs': ['include/gnutls'], } diff --git a/g/gompi/gompi-2015e.eb b/g/gompi/gompi-2015e.eb index a4a47fab..f89723f7 100644 --- a/g/gompi/gompi-2015e.eb +++ b/g/gompi/gompi-2015e.eb @@ -13,13 +13,13 @@ local_compname = 'GCC' local_local_compver = '4.4.7-system' local_comp = (local_compname, local_local_compver) -mpilib = 'OpenMPI' -mpiver = '1.8.6' +local_mpilib = 'OpenMPI' +local_mpiver = '1.8.6' # local_compiler toolchain dependencies dependencies = [ local_comp, - (mpilib, mpiver, '', local_comp), + (local_mpilib, local_mpiver, '', local_comp), ] moduleclass = 'toolchain' diff --git a/g/gompi/gompi-2016.07.eb b/g/gompi/gompi-2016.07.eb index a05d17da..fe9d0cc5 100644 --- a/g/gompi/gompi-2016.07.eb +++ b/g/gompi/gompi-2016.07.eb @@ -11,12 +11,12 @@ toolchain = SYSTEM local_gccver = '6.1.0' local_local_binutilsver = '2.27' -gccbinver = '%s-%s' % (local_gccver, local_local_binutilsver) +local_gccbinver = '%s-%s' % (local_gccver, local_local_binutilsver) # local_compiler toolchain dependencies dependencies = [ - ('GCC', gccbinver), # includes both GCC and local_binutils - ('OpenMPI', '1.10.3', '', ('GCC', gccbinver)), + ('GCC', local_gccbinver), # includes both GCC and local_binutils + ('OpenMPI', '1.10.3', '', ('GCC', local_gccbinver)), ] moduleclass = 'toolchain' diff --git a/g/goolf/goolf-1.5.12.eb b/g/goolf/goolf-1.5.12.eb index d53d162d..701e9b36 100644 --- a/g/goolf/goolf-1.5.12.eb +++ b/g/goolf/goolf-1.5.12.eb @@ -15,8 +15,8 @@ local_comp = (local_local_comp_name, local_local_comp_version) local_blaslib = 'OpenBLAS' local_blasver = '0.2.8' -blas = '%s-%s' % (local_blaslib, local_blasver) -blaslocal_suff = '-LAPACK-3.5.0' +local_blas = '%s-%s' % (local_blaslib, local_blasver) +local_blaslocal_suff = '-LAPACK-3.5.0' # toolchain used to build goolf dependencies local_comp_mpi_tc_name = 'gompi' @@ -29,9 +29,9 @@ local_comp_mpi_tc = (local_comp_mpi_tc_name, local_comp_mpi_tc_ver) dependencies = [ ('GCC', '4.8.1'), ('OpenMPI', '1.6.5', '', local_comp), # part of gompi - (local_blaslib, local_blasver, blaslocal_suff, local_comp_mpi_tc), + (local_blaslib, local_blasver, local_blaslocal_suff, local_comp_mpi_tc), ('FFTW', '3.3.3', '', local_comp_mpi_tc), - ('ScaLAPACK', '2.0.2', '-%s%s' % (blas, blaslocal_suff), local_comp_mpi_tc), + ('ScaLAPACK', '2.0.2', '-%s%s' % (local_blas, local_blaslocal_suff), local_comp_mpi_tc), ] moduleclass = 'toolchain' diff --git a/h/HMMER/HMMER-3.0-goalf-1.1.0-no-OFED.eb b/h/HMMER/HMMER-3.0-goalf-1.1.0-no-OFED.eb index c5ec7729..d9754eee 100644 --- a/h/HMMER/HMMER-3.0-goalf-1.1.0-no-OFED.eb +++ b/h/HMMER/HMMER-3.0-goalf-1.1.0-no-OFED.eb @@ -29,11 +29,11 @@ toolchain = {'name': 'goalf', 'version': '1.1.0-no-OFED'} # eg. # http://selab.janelia.org/software/hmmer3/3.0/hmmer-3.0-linux-intel-x86_64.tar.gz -versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) +local_versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) sources = ['hmmer-%s-linux-intel-x86_64.tar.gz' % version] source_urls = [ 'http://selab.janelia.org/software/%s/%s/' % - (versiondir, version)] + (local_versiondir, version)] sanity_check_paths = { 'files': ["bin/hmmemit", "bin/hmmsearch", "bin/hmmscan"], diff --git a/h/HMMER/HMMER-3.0-goolf-1.4.10.eb b/h/HMMER/HMMER-3.0-goolf-1.4.10.eb index 1e792deb..34765662 100644 --- a/h/HMMER/HMMER-3.0-goolf-1.4.10.eb +++ b/h/HMMER/HMMER-3.0-goolf-1.4.10.eb @@ -28,11 +28,11 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} # eg. # http://selab.janelia.org/software/hmmer3/3.0/hmmer-3.0-linux-intel-x86_64.tar.gz -versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) +local_versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) sources = ['hmmer-%s-linux-intel-x86_64.tar.gz' % version] source_urls = [ 'http://selab.janelia.org/software/%s/%s/' % - (versiondir, version)] + (local_versiondir, version)] sanity_check_paths = { 'files': ["bin/hmmemit", "bin/hmmsearch", "bin/hmmscan"], diff --git a/h/HMMER/HMMER-3.0-ictce-4.0.6.eb b/h/HMMER/HMMER-3.0-ictce-4.0.6.eb index d9204363..9e58e236 100644 --- a/h/HMMER/HMMER-3.0-ictce-4.0.6.eb +++ b/h/HMMER/HMMER-3.0-ictce-4.0.6.eb @@ -29,11 +29,11 @@ toolchain = {'version': '4.0.6', 'name': 'ictce'} # eg. # http://selab.janelia.org/software/hmmer3/3.0/hmmer-3.0-linux-intel-x86_64.tar.gz -versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) +local_versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) sources = ['hmmer-%s-linux-intel-x86_64.tar.gz' % version] source_urls = [ 'http://selab.janelia.org/software/%s/%s/' % - (versiondir, version)] + (local_versiondir, version)] sanity_check_paths = { 'files': ["bin/hmmemit", "bin/hmmsearch", "bin/hmmscan"], diff --git a/h/HMMER/HMMER-3.0-ictce-5.3.0.eb b/h/HMMER/HMMER-3.0-ictce-5.3.0.eb index 0d390cd9..00d3ae6a 100644 --- a/h/HMMER/HMMER-3.0-ictce-5.3.0.eb +++ b/h/HMMER/HMMER-3.0-ictce-5.3.0.eb @@ -30,11 +30,11 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} # eg. # http://selab.janelia.org/software/hmmer3/3.0/hmmer-3.0-linux-intel-x86_64.tar.gz -versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) +local_versiondir = "hmmer%s" % ".".join(version.split('.')[:-1]) sources = ['hmmer-%s-linux-intel-x86_64.tar.gz' % version] source_urls = [ 'http://selab.janelia.org/software/%s/%s/' % - (versiondir, version)] + (local_versiondir, version)] sanity_check_paths = { 'files': ["bin/hmmemit", "bin/hmmsearch", "bin/hmmscan"], diff --git a/h/HarfBuzz/HarfBuzz-1.1.3.eb b/h/HarfBuzz/HarfBuzz-1.1.3.eb index 955c8804..542833bc 100644 --- a/h/HarfBuzz/HarfBuzz-1.1.3.eb +++ b/h/HarfBuzz/HarfBuzz-1.1.3.eb @@ -11,9 +11,9 @@ toolchain = SYSTEM source_urls = ['http://www.freedesktop.org/software/harfbuzz/release/'] sources = [SOURCELOWER_TAR_BZ2] -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ - ('GLib', glibver), + ('GLib', local_glibver), ('cairo', '1.14.6'), ('freetype', '2.8'), ('GObject-Introspection', '1.47.1') diff --git a/h/hanythingondemand/hanythingondemand-3.0.0-cli.eb b/h/hanythingondemand/hanythingondemand-3.0.0-cli.eb index 4f3326da..ef309e43 100644 --- a/h/hanythingondemand/hanythingondemand-3.0.0-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.0.0-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.4.2'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.0.1-cli.eb b/h/hanythingondemand/hanythingondemand-3.0.1-cli.eb index 55d36da4..46a6ea7e 100644 --- a/h/hanythingondemand/hanythingondemand-3.0.1-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.0.1-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.4.2'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.0.2-cli.eb b/h/hanythingondemand/hanythingondemand-3.0.2-cli.eb index 913dc5ae..b166db85 100644 --- a/h/hanythingondemand/hanythingondemand-3.0.2-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.0.2-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.4.2'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.0.3-cli.eb b/h/hanythingondemand/hanythingondemand-3.0.3-cli.eb index de112eb3..233072e4 100644 --- a/h/hanythingondemand/hanythingondemand-3.0.3-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.0.3-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.4.2'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.0.4-cli.eb b/h/hanythingondemand/hanythingondemand-3.0.4-cli.eb index aca7d849..7d418fe8 100644 --- a/h/hanythingondemand/hanythingondemand-3.0.4-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.0.4-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.4.2'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.1.0-cli.eb b/h/hanythingondemand/hanythingondemand-3.1.0-cli.eb index 580853b3..0c1d50ca 100644 --- a/h/hanythingondemand/hanythingondemand-3.1.0-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.1.0-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.5.1'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.1.1-cli.eb b/h/hanythingondemand/hanythingondemand-3.1.1-cli.eb index 74737741..be1d450a 100644 --- a/h/hanythingondemand/hanythingondemand-3.1.1-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.1.1-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.5.1'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.1.2-cli.eb b/h/hanythingondemand/hanythingondemand-3.1.2-cli.eb index e722ae5f..3d77438f 100644 --- a/h/hanythingondemand/hanythingondemand-3.1.2-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.1.2-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.5.1'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.1.3-cli.eb b/h/hanythingondemand/hanythingondemand-3.1.3-cli.eb index 4476ac30..71f46dd9 100644 --- a/h/hanythingondemand/hanythingondemand-3.1.3-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.1.3-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.5.1'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.1.4-cli.eb b/h/hanythingondemand/hanythingondemand-3.1.4-cli.eb index 38bda71e..0220f960 100644 --- a/h/hanythingondemand/hanythingondemand-3.1.4-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.1.4-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.5.1'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hanythingondemand/hanythingondemand-3.2.0-cli.eb b/h/hanythingondemand/hanythingondemand-3.2.0-cli.eb index c9870c9a..7582714d 100644 --- a/h/hanythingondemand/hanythingondemand-3.2.0-cli.eb +++ b/h/hanythingondemand/hanythingondemand-3.2.0-cli.eb @@ -20,7 +20,7 @@ dependencies = [ ('vsc-base', '2.5.1'), ] -use_easy_install = True +local_use_easy_install = True zipped_egg = True # use 'hod' rather than 'hanythingondemand' in module name diff --git a/h/hwloc/hwloc-1.8.1-GCC-4.8.3.eb b/h/hwloc/hwloc-1.8.1-GCC-4.8.3.eb index 630cd8bb..4e7c2ecb 100644 --- a/h/hwloc/hwloc-1.8.1-GCC-4.8.3.eb +++ b/h/hwloc/hwloc-1.8.1-GCC-4.8.3.eb @@ -17,6 +17,6 @@ source_urls = [ 'http://www.open-mpi.org/software/hwloc/v%(version_major_minor)s/downloads/'] sources = [SOURCE_TAR_GZ] -opt = True +local_opt = True moduleclass = 'system' diff --git a/i/IGV/IGV-2.3.68-Java-1.7.0_80.eb b/i/IGV/IGV-2.3.68-Java-1.7.0_80.eb index 2c2a30ba..b29b0cc6 100644 --- a/i/IGV/IGV-2.3.68-Java-1.7.0_80.eb +++ b/i/IGV/IGV-2.3.68-Java-1.7.0_80.eb @@ -18,10 +18,10 @@ toolchain = SYSTEM source_urls = ['http://data.broadinstitute.org/igv/projects/downloads/'] sources = ['%(name)s_%(version)s.zip'] -java = 'Java' -javaver = '1.7.0_80' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_80' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] # add the installation dir to PATH modextrapaths = { diff --git a/i/iomkl/iomkl-2017a.eb b/i/iomkl/iomkl-2017a.eb index 70064029..a6c2b8b6 100644 --- a/i/iomkl/iomkl-2017a.eb +++ b/i/iomkl/iomkl-2017a.eb @@ -10,12 +10,12 @@ description = """Intel Cluster Toolchain Compiler Edition provides Intel C/C++ a toolchain = SYSTEM local_compver = '2017.1.132' -gcclocal_suff = '-GCC-6.3.0-2.27' +local_gcclocal_suff = '-GCC-6.3.0-2.27' dependencies = [ - ('icc', local_compver, gcclocal_suff), - ('ifort', local_compver, gcclocal_suff), - ('OpenMPI', '1.10.7', gcclocal_suff, True), + ('icc', local_compver, local_gcclocal_suff), + ('ifort', local_compver, local_gcclocal_suff), + ('OpenMPI', '1.10.7', local_gcclocal_suff, True), ('imkl', '2017.1.132', '', ('iompi', version)), ] diff --git a/i/iomkl/iomkl-2017b.eb b/i/iomkl/iomkl-2017b.eb index 8d89ce66..23d088b0 100644 --- a/i/iomkl/iomkl-2017b.eb +++ b/i/iomkl/iomkl-2017b.eb @@ -12,12 +12,12 @@ description = """Intel Cluster Toolchain Compiler Edition provides Intel C/C++ a toolchain = SYSTEM local_compver = '2017.5.239' -gcclocal_suff = '-GCC-6.3.0-2.27' +local_gcclocal_suff = '-GCC-6.3.0-2.27' dependencies = [ - ('icc', local_compver, gcclocal_suff), - ('ifort', local_compver, gcclocal_suff), - ('OpenMPI', '1.10.7', gcclocal_suff, True), + ('icc', local_compver, local_gcclocal_suff), + ('ifort', local_compver, local_gcclocal_suff), + ('OpenMPI', '1.10.7', local_gcclocal_suff, True), ('imkl', '2017.4.239', '', ('iompi', version)), ] diff --git a/i/iomkl/iomkl-2018.03-GCC-6.3.0-2.27.eb b/i/iomkl/iomkl-2018.03-GCC-6.3.0-2.27.eb index c63f92e2..f8fb326d 100644 --- a/i/iomkl/iomkl-2018.03-GCC-6.3.0-2.27.eb +++ b/i/iomkl/iomkl-2018.03-GCC-6.3.0-2.27.eb @@ -13,12 +13,12 @@ description = """Intel Cluster Toolchain Compiler Edition provides Intel C/C++ a toolchain = SYSTEM local_compver = '2018.3.222' -gcclocal_suff = '-GCC-6.3.0-2.27' +local_gcclocal_suff = '-GCC-6.3.0-2.27' dependencies = [ - ('icc', local_compver, gcclocal_suff), - ('ifort', local_compver, gcclocal_suff), - ('OpenMPI', '2.1.1', gcclocal_suff, True), + ('icc', local_compver, local_gcclocal_suff), + ('ifort', local_compver, local_gcclocal_suff), + ('OpenMPI', '2.1.1', local_gcclocal_suff, True), ('imkl', '2018.3.222', '-GCC-6.3.0-2.27', ('iompi', version)), ] diff --git a/i/iomkl/iomkl-2018.04.eb b/i/iomkl/iomkl-2018.04.eb index 435881aa..5bcdef43 100644 --- a/i/iomkl/iomkl-2018.04.eb +++ b/i/iomkl/iomkl-2018.04.eb @@ -12,12 +12,12 @@ description = """Intel Cluster Toolchain Compiler Edition provides Intel C/C++ a toolchain = SYSTEM local_compver = '2018.5.274' -gcclocal_suff = '-GCC-6.3.0-2.27' +local_gcclocal_suff = '-GCC-6.3.0-2.27' dependencies = [ - ('icc', local_compver, gcclocal_suff), - ('ifort', local_compver, gcclocal_suff), - ('OpenMPI', '2.1.1', gcclocal_suff, True), + ('icc', local_compver, local_gcclocal_suff), + ('ifort', local_compver, local_gcclocal_suff), + ('OpenMPI', '2.1.1', local_gcclocal_suff, True), ('imkl', '2018.4.274', '', ('iompi', version)), ] diff --git a/i/itac/itac-2017.1.024.eb b/i/itac/itac-2017.1.024.eb index 292880a7..53752eb8 100644 --- a/i/itac/itac-2017.1.024.eb +++ b/i/itac/itac-2017.1.024.eb @@ -12,7 +12,7 @@ sources = ['l_itac_p_%(version)s.tgz'] dontcreateinstalldir = 'True' -preferredmpi = 'impi5' +local_preferredmpi = 'impi5' # license file license_file = '/apps/licenses/intel/license.lic' diff --git a/i/itac/itac-2020.3.036.eb b/i/itac/itac-2020.3.036.eb index 466e6713..a6b1fb2e 100644 --- a/i/itac/itac-2020.3.036.eb +++ b/i/itac/itac-2020.3.036.eb @@ -15,7 +15,7 @@ sources = ['l_itac_p_%(version)s.tgz'] dontcreateinstalldir = 'True' -preferredmpi = 'impi5' +local_preferredmpi = 'impi5' # license file license_file = '/apps/licenses/intel/license.lic' diff --git a/i/itac/itac-8.0.0.011.eb b/i/itac/itac-8.0.0.011.eb index 2c7709cb..66a3ed39 100644 --- a/i/itac/itac-8.0.0.011.eb +++ b/i/itac/itac-8.0.0.011.eb @@ -12,7 +12,7 @@ sources = ['l_itac_p_%s.tgz' % version] dontcreateinstalldir = 'True' -preferredmpi = 'impi4' +local_preferredmpi = 'impi4' # license file license_file = '/apps/licenses/intel/license.lic' diff --git a/i/itac/itac-8.1.4.045.eb b/i/itac/itac-8.1.4.045.eb index 105b78f7..fad65699 100644 --- a/i/itac/itac-8.1.4.045.eb +++ b/i/itac/itac-8.1.4.045.eb @@ -12,7 +12,7 @@ sources = ['l_itac_p_%(version)s.tgz'] dontcreateinstalldir = 'True' -preferredmpi = 'impi4' +local_preferredmpi = 'impi4' # license file license_file = '/apps/licenses/intel/license.lic' diff --git a/i/itac/itac-9.0.3.051.eb b/i/itac/itac-9.0.3.051.eb index 4b430c88..3ded42a8 100644 --- a/i/itac/itac-9.0.3.051.eb +++ b/i/itac/itac-9.0.3.051.eb @@ -12,7 +12,7 @@ sources = ['l_itac_p_%(version)s.tgz'] dontcreateinstalldir = 'True' -preferredmpi = 'impi5' +local_preferredmpi = 'impi5' # license file license_file = '/apps/licenses/intel/license.lic' diff --git a/i/itac/itac-9.1.2.024.eb b/i/itac/itac-9.1.2.024.eb index bd4f124c..4d82ade6 100644 --- a/i/itac/itac-9.1.2.024.eb +++ b/i/itac/itac-9.1.2.024.eb @@ -12,7 +12,7 @@ sources = ['l_itac_p_%(version)s.tgz'] dontcreateinstalldir = 'True' -preferredmpi = 'impi4' +local_preferredmpi = 'impi4' # license file import os diff --git a/j/Java/Java-1.8.0_121.eb b/j/Java/Java-1.8.0_121.eb index 8157060e..18c4834b 100644 --- a/j/Java/Java-1.8.0_121.eb +++ b/j/Java/Java-1.8.0_121.eb @@ -9,8 +9,8 @@ toolchain = SYSTEM # download the tar.gz directly from # http://www.oracle.com/technetwork/java/javase/downloads/index.html -(vp, vs) = version.split('_') -altver = '%su%s' % (vp.split('.')[1], vs) -sources = ['jdk-%s-linux-x64.tar.gz' % altver] +(local_vp, local_vs) = version.split('_') +local_altver = '%su%s' % (local_vp.split('.')[1], local_vs) +sources = ['jdk-%s-linux-x64.tar.gz' % local_altver] moduleclass = 'lang' diff --git a/j/Java/Java-1.8.0_144.eb b/j/Java/Java-1.8.0_144.eb index cff38872..95b1fd65 100644 --- a/j/Java/Java-1.8.0_144.eb +++ b/j/Java/Java-1.8.0_144.eb @@ -9,8 +9,8 @@ toolchain = SYSTEM # download the tar.gz directly from # http://www.oracle.com/technetwork/java/javase/downloads/index.html -(vp, vs) = version.split('_') -altver = '%su%s' % (vp.split('.')[1], vs) -sources = ['jdk-%s-linux-x64.tar.gz' % altver] +(local_vp, local_vs) = version.split('_') +local_altver = '%su%s' % (local_vp.split('.')[1], local_vs) +sources = ['jdk-%s-linux-x64.tar.gz' % local_altver] moduleclass = 'lang' diff --git a/j/Java/Java-1.8.0_221.eb b/j/Java/Java-1.8.0_221.eb index fd151497..af940e5e 100644 --- a/j/Java/Java-1.8.0_221.eb +++ b/j/Java/Java-1.8.0_221.eb @@ -9,8 +9,8 @@ toolchain = SYSTEM # download the tar.gz directly from # http://www.oracle.com/technetwork/java/javase/downloads/index.html -(vp, vs) = version.split('_') -altver = '%su%s' % (vp.split('.')[1], vs) -sources = ['jdk-%s-linux-x64.tar.gz' % altver] +(local_vp, local_vs) = version.split('_') +local_altver = '%su%s' % (local_vp.split('.')[1], local_vs) +sources = ['jdk-%s-linux-x64.tar.gz' % local_altver] moduleclass = 'lang' diff --git a/j/Java/Java-1.8.0_241.eb b/j/Java/Java-1.8.0_241.eb index f97aca87..0ac8c269 100644 --- a/j/Java/Java-1.8.0_241.eb +++ b/j/Java/Java-1.8.0_241.eb @@ -11,8 +11,8 @@ toolchain = SYSTEM # download the tar.gz directly from # http://www.oracle.com/technetwork/java/javase/downloads/index.html -(vp, vs) = version.split('_') -altver = '%su%s' % (vp.split('.')[1], vs) -sources = ['jdk-%s-linux-x64.tar.gz' % altver] +(local_vp, local_vs) = version.split('_') +local_altver = '%su%s' % (local_vp.split('.')[1], local_vs) +sources = ['jdk-%s-linux-x64.tar.gz' % local_altver] moduleclass = 'lang' diff --git a/j/Java/Java-1.8.0_51.eb b/j/Java/Java-1.8.0_51.eb index 441e556e..3e1d8bd1 100644 --- a/j/Java/Java-1.8.0_51.eb +++ b/j/Java/Java-1.8.0_51.eb @@ -10,8 +10,8 @@ toolchain = SYSTEM # download the tar.gz directly from # http://www.oracle.com/technetwork/java/javase/downloads/index.html -(vp, vs) = version.split('_') -altver = '%su%s' % (vp.split('.')[1], vs) -sources = ['jdk-%s-linux-x64.tar.gz' % altver] +(local_vp, local_vs) = version.split('_') +local_altver = '%su%s' % (local_vp.split('.')[1], local_vs) +sources = ['jdk-%s-linux-x64.tar.gz' % local_altver] moduleclass = 'lang' diff --git a/j/jModelTest/jModelTest-2.1.9r20160115-goolf-1.4.10-Java-1.7.0_75.eb b/j/jModelTest/jModelTest-2.1.9r20160115-goolf-1.4.10-Java-1.7.0_75.eb index be0cafb4..85cab0da 100644 --- a/j/jModelTest/jModelTest-2.1.9r20160115-goolf-1.4.10-Java-1.7.0_75.eb +++ b/j/jModelTest/jModelTest-2.1.9r20160115-goolf-1.4.10-Java-1.7.0_75.eb @@ -16,9 +16,9 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['https://github.com/ddarriba/jmodeltest2/archive/'] sources = ['v%(version)s.tar.gz'] -java = 'Java' -javaver = '1.7.0_75' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_75' +versionsuffix = '-%s-%s' % (local_java, local_javaver) builddependencies = [('ant', '1.9.6', '-Java-1.7.0_75', True)] @@ -26,7 +26,7 @@ dependencies = [('MPJ-Express', '0.44', '%(versionsuffix)s')] install_cmd = "cd jmodeltest2-%(version)s && ant -Ddist.dir=%(installdir)s jar" -modloadmsg = """To execute jModelTest run: java -jar \\$EBROOTJMODELTEST/jModelTest.jar""" +modloadmsg = """To execute jModelTest run: local_java -jar \\$EBROOTJMODELTEST/jModelTest.jar""" sanity_check_paths = { 'files': ['jModelTest.jar'], diff --git a/l/LAPACKE/LAPACKE-3.5.0.eb b/l/LAPACKE/LAPACKE-3.5.0.eb index 15725958..24c2b9b8 100644 --- a/l/LAPACKE/LAPACKE-3.5.0.eb +++ b/l/LAPACKE/LAPACKE-3.5.0.eb @@ -4,16 +4,16 @@ name = 'LAPACKE' version = '3.5.0' toolchain = SYSTEM -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://www.netlib.org/lapack/lapacke.html' description = """LAPACKE C Interface to LAPACK header files and library""" -lapack_src = 'lapack-%s.tgz' % lapackver +local_lapack_src = 'lapack-%s.tgz' % local_lapackver sources = [ - lapack_src, + local_lapack_src, ] source_urls = [ "http://www.netlib.org/lapack/", diff --git a/m/MOSAIK/MOSAIK-2.2.28-goolf-1.4.10-20140425-24cf06.eb b/m/MOSAIK/MOSAIK-2.2.28-goolf-1.4.10-20140425-24cf06.eb index 33e81a5b..2dc7242a 100644 --- a/m/MOSAIK/MOSAIK-2.2.28-goolf-1.4.10-20140425-24cf06.eb +++ b/m/MOSAIK/MOSAIK-2.2.28-goolf-1.4.10-20140425-24cf06.eb @@ -8,8 +8,8 @@ easyblock = 'MakeCp' name = 'MOSAIK' version = '2.2.28' # first six digits of the commit id we will download from github -git_commit_id = '24cf06' -versionsuffix = '-20140425-%s' % git_commit_id +local_git_commit_id = '24cf06' +versionsuffix = '-20140425-%s' % local_git_commit_id homepage = 'https://code.google.com/p/mosaik-aligner/' description = """ MOSAIK is a reference-guided aligner for next-generation @@ -18,7 +18,7 @@ description = """ MOSAIK is a reference-guided aligner for next-generation toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['https://github.com/wanpinglee/MOSAIK/archive/'] -sources = ['%s.tar.gz' % (git_commit_id)] +sources = ['%s.tar.gz' % (local_git_commit_id)] dependencies = [('zlib', '1.2.8')] diff --git a/m/MOSAIK/MOSAIK-2.2.28-ictce-6.2.5-20140425-24cf06.eb b/m/MOSAIK/MOSAIK-2.2.28-ictce-6.2.5-20140425-24cf06.eb index b01182f0..9d49a9ca 100644 --- a/m/MOSAIK/MOSAIK-2.2.28-ictce-6.2.5-20140425-24cf06.eb +++ b/m/MOSAIK/MOSAIK-2.2.28-ictce-6.2.5-20140425-24cf06.eb @@ -8,8 +8,8 @@ easyblock = 'MakeCp' name = 'MOSAIK' version = '2.2.28' # first six digits of the commit id we will download from github -git_commit_id = '24cf06' -versionsuffix = '-20140425-%s' % git_commit_id +local_git_commit_id = '24cf06' +versionsuffix = '-20140425-%s' % local_git_commit_id homepage = 'https://code.google.com/p/mosaik-aligner/' description = """ MOSAIK is a reference-guided aligner for next-generation @@ -18,7 +18,7 @@ description = """ MOSAIK is a reference-guided aligner for next-generation toolchain = {'name': 'ictce', 'version': '6.2.5'} source_urls = ['https://github.com/wanpinglee/MOSAIK/archive/'] -sources = ['%s.tar.gz' % (git_commit_id)] +sources = ['%s.tar.gz' % (local_git_commit_id)] dependencies = [('zlib', '1.2.8')] diff --git a/m/MPJ-Express/MPJ-Express-0.44-goolf-1.4.10-Java-1.7.0_75.eb b/m/MPJ-Express/MPJ-Express-0.44-goolf-1.4.10-Java-1.7.0_75.eb index 05abcf47..d83c2b9d 100644 --- a/m/MPJ-Express/MPJ-Express-0.44-goolf-1.4.10-Java-1.7.0_75.eb +++ b/m/MPJ-Express/MPJ-Express-0.44-goolf-1.4.10-Java-1.7.0_75.eb @@ -17,14 +17,14 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['https://sourceforge.net/projects/mpjexpress/files/releases/'] sources = ['mpj-v%s.tar.gz' % (version.replace('.', '_'))] -java = 'Java' -javaver = '1.7.0_75' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_75' +versionsuffix = '-%s-%s' % (local_java, local_javaver) builddependencies = [('CMake', '2.8.12')] dependencies = [ - (java, javaver, '', True), + (local_java, local_javaver, '', True), ] # local_compile JNI wrapper library as described in docs diff --git a/m/MotionCor2/MotionCor2-1.0.5-CUDA-8.0.44.eb b/m/MotionCor2/MotionCor2-1.0.5-CUDA-8.0.44.eb index b8b366b9..c8cd5514 100644 --- a/m/MotionCor2/MotionCor2-1.0.5-CUDA-8.0.44.eb +++ b/m/MotionCor2/MotionCor2-1.0.5-CUDA-8.0.44.eb @@ -20,9 +20,9 @@ dependencies = [ ] -commands = "mv MotionCor2_Cuda8.0_v1.0.5 MotionCor2" +local_commands = "mv MotionCor2_Cuda8.0_v1.0.5 MotionCor2" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] files_to_copy = [ (['MotionCor2'], 'bin'), diff --git a/m/MuTect/MuTect-1.1.4-Java-1.7.0_76.eb b/m/MuTect/MuTect-1.1.4-Java-1.7.0_76.eb index 0283cc7b..931533d1 100644 --- a/m/MuTect/MuTect-1.1.4-Java-1.7.0_76.eb +++ b/m/MuTect/MuTect-1.1.4-Java-1.7.0_76.eb @@ -19,11 +19,11 @@ source_urls = [ 'http://www.broadinstitute.org/cancer/cga/sites/default/files/data/tools/mutect/'] sources = ['muTect-%(version)s-bin.zip'] -java = 'Java' -javaver = '1.7.0_76' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_76' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] sanity_check_paths = { 'files': ["muTect-%(version)s.jar"], @@ -31,7 +31,7 @@ sanity_check_paths = { } modloadmsg = """ -to execute: java -jar \\$EBROOTMUTECT/muTect-%(version)s.jar +to execute: local_java -jar \\$EBROOTMUTECT/muTect-%(version)s.jar """ moduleclass = 'bio' diff --git a/m/matplotlib/matplotlib-2.0.2-Python-3.6.1-libpng-1.6.29.eb b/m/matplotlib/matplotlib-2.0.2-Python-3.6.1-libpng-1.6.29.eb index d361a22e..2ed3ec25 100644 --- a/m/matplotlib/matplotlib-2.0.2-Python-3.6.1-libpng-1.6.29.eb +++ b/m/matplotlib/matplotlib-2.0.2-Python-3.6.1-libpng-1.6.29.eb @@ -2,8 +2,8 @@ easyblock = 'Bundle' name = 'matplotlib' version = '2.0.2' -libpng_ver = '1.6.29' -versionsuffix = '-Python-%%(local_pyver)s-libpng-%s' % libpng_ver +local_libpng_ver = '1.6.29' +versionsuffix = '-Python-%%(local_pyver)s-libpng-%s' % local_libpng_ver homepage = 'http://matplotlib.org' description = """matplotlib is a python 2D plotting library which produces publication quality figures in a variety of @@ -17,7 +17,7 @@ exts_defaultclass = 'PythonPackage' dependencies = [ ('Python', '3.6.1'), - ('freetype', '2.7.1', '-libpng-%s' % libpng_ver), + ('freetype', '2.7.1', '-libpng-%s' % local_libpng_ver), ] exts_list = [ @@ -33,7 +33,7 @@ exts_list = [ # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [], diff --git a/m/mumax/mumax-3.9.3-CUDA-7.5.18.eb b/m/mumax/mumax-3.9.3-CUDA-7.5.18.eb index b04393a9..842e1500 100644 --- a/m/mumax/mumax-3.9.3-CUDA-7.5.18.eb +++ b/m/mumax/mumax-3.9.3-CUDA-7.5.18.eb @@ -29,10 +29,10 @@ builddependencies = [ ('Go', '1.11.1'), ] -commands = "export GOPATH=%(builddir)s && " -commands += "cd src/github.com/mumax/3/cmd/mumax3 && go install" +local_commands = "export GOPATH=%(builddir)s && " +local_commands += "cd src/github.com/mumax/3/cmd/mumax3 && go install" -cmds_map = [('.*', commands)] +cmds_map = [('.*', local_commands)] start_dir = "%(builddir)s" diff --git a/n/NCCL/NCCL-2.4.2-gcccuda-2019a.eb b/n/NCCL/NCCL-2.4.2-gcccuda-2019a.eb index 4e220cd8..4a24027c 100644 --- a/n/NCCL/NCCL-2.4.2-gcccuda-2019a.eb +++ b/n/NCCL/NCCL-2.4.2-gcccuda-2019a.eb @@ -10,10 +10,10 @@ communication primitives that are performance optimized for NVIDIA GPUs.""" # gcccuda/2019a uses CUDA 10.1 toolchain = {'name': 'gcccuda', 'version': '2019a'} -cuda_version = '10.1' +local_cuda_version = '10.1' # Download from https://developer.nvidia.com/nccl/nccl-download (after log in) -sources = ['%%(namelower)s_%%(version)s-1+cuda%s_x86_64.txz' % cuda_version] +sources = ['%%(namelower)s_%%(version)s-1+cuda%s_x86_64.txz' % local_cuda_version] checksums = ['27dad0e9495d2382e34d2701472a702007be65275b22f782e74613af08e0a39b'] skipsteps = ['build'] diff --git a/n/ncurses/ncurses-5.9.eb b/n/ncurses/ncurses-5.9.eb index adb21854..370851c3 100644 --- a/n/ncurses/ncurses-5.9.eb +++ b/n/ncurses/ncurses-5.9.eb @@ -25,12 +25,12 @@ configopts = [ buildopts = "CFLAGS='-fPIC'" -libs = ["form", "menu", "ncurses", "panel"] +local_libs = ["form", "menu", "ncurses", "panel"] sanity_check_paths = { 'files': ['bin/%s' % x for x in ["captoinfo", "clear", "infocmp", "infotocap", "ncurses5-config", "reset", "tabs", "tic", "toe", "tput", "tset"]] + - ['lib/lib%s%s.a' % (x, y) for x in libs for y in ['', '_g', 'w', 'w_g']] + - ['lib/lib%s%s.so' % (x, y) for x in libs for y in ['', 'w']] + + ['lib/lib%s%s.a' % (x, y) for x in local_libs for y in ['', '_g', 'w', 'w_g']] + + ['lib/lib%s%s.so' % (x, y) for x in local_libs for y in ['', 'w']] + ['lib/libncurses++%s.a' % x for x in ['', 'w']], 'dirs': ['include', 'include/ncursesw'], } diff --git a/n/ncurses/ncurses-6.0.eb b/n/ncurses/ncurses-6.0.eb index 8f803ed4..e35a798a 100644 --- a/n/ncurses/ncurses-6.0.eb +++ b/n/ncurses/ncurses-6.0.eb @@ -23,12 +23,12 @@ configopts = [ '--with-shared --enable-overwrite --enable-ext-colors --enable-widec --includedir=%(installdir)s/include/ncursesw/' ] -libs = ["form", "menu", "ncurses", "panel"] +local_libs = ["form", "menu", "ncurses", "panel"] sanity_check_paths = { 'files': ['bin/%s' % x for x in ["captoinfo", "clear", "infocmp", "infotocap", "ncurses%(version_major)s-config", "reset", "tabs", "tic", "toe", "tput", "tset"]] + - ['lib/lib%s%s.a' % (x, y) for x in libs for y in ['', '_g', 'w', 'w_g']] + - ['lib/lib%s%s.%s' % (x, y, SHLIB_EXT) for x in libs for y in ['', 'w']] + + ['lib/lib%s%s.a' % (x, y) for x in local_libs for y in ['', '_g', 'w', 'w_g']] + + ['lib/lib%s%s.%s' % (x, y, SHLIB_EXT) for x in local_libs for y in ['', 'w']] + ['lib/libncurses++%s.a' % x for x in ['', 'w']], 'dirs': ['include', 'include/ncursesw'], } diff --git a/n/ncurses/ncurses-6.1-GCCcore-8.3.0.eb b/n/ncurses/ncurses-6.1-GCCcore-8.3.0.eb index 90748562..834eb575 100644 --- a/n/ncurses/ncurses-6.1-GCCcore-8.3.0.eb +++ b/n/ncurses/ncurses-6.1-GCCcore-8.3.0.eb @@ -29,12 +29,12 @@ configopts = [ '--with-shared --enable-overwrite --enable-ext-colors --enable-widec --includedir=%(installdir)s/include/ncursesw/' ] -libs = ["form", "menu", "ncurses", "panel"] +local_libs = ["form", "menu", "ncurses", "panel"] sanity_check_paths = { 'files': ['bin/%s' % x for x in ["captoinfo", "clear", "infocmp", "infotocap", "ncurses%(version_major)s-config", "reset", "tabs", "tic", "toe", "tput", "tset"]] + - ['lib/lib%s%s.a' % (x, y) for x in libs for y in ['', '_g', 'w', 'w_g']] + - ['lib/lib%s%s.%s' % (x, y, SHLIB_EXT) for x in libs for y in ['', 'w']] + + ['lib/lib%s%s.a' % (x, y) for x in local_libs for y in ['', '_g', 'w', 'w_g']] + + ['lib/lib%s%s.%s' % (x, y, SHLIB_EXT) for x in local_libs for y in ['', 'w']] + ['lib/libncurses++%s.a' % x for x in ['', 'w']], 'dirs': ['include', 'include/ncursesw'], } diff --git a/n/ncurses/ncurses-6.1.eb.orig_20220606091930_28539 b/n/ncurses/ncurses-6.1.eb.orig_20220606091930_28539 deleted file mode 100644 index e244290b..00000000 --- a/n/ncurses/ncurses-6.1.eb.orig_20220606091930_28539 +++ /dev/null @@ -1,38 +0,0 @@ -# IT4Innovations 2018 - -easyblock = 'ConfigureMake' - -name = 'ncurses' -version = '6.1' - -homepage = 'http://www.gnu.org/software/ncurses/' -description = """The Ncurses (new curses) library is a free software emulation of curses in System V Release 4.0, - and more. It uses Terminfo format, supports pads and color and multiple highlights and forms characters and - function-key mapping, and has all the other SYSV-curses enhancements over BSD Curses.""" - -toolchain = SYSTEM -toolchainopts = {'optarch': True, 'pic': True} - -source_urls = [GNU_SOURCE] -sources = [SOURCE_TAR_GZ] - -buildopts = 'CFLAGS="-O3 -fPIC"' - -configopts = [ - # default build - '--with-shared --enable-overwrite', - # the UTF-8 enabled version (ncursesw) - '--with-shared --enable-overwrite --enable-ext-colors --enable-widec --includedir=%(installdir)s/include/ncursesw/' -] - -libs = ["form", "menu", "ncurses", "panel"] -sanity_check_paths = { - 'files': ['bin/%s' % x for x in ["captoinfo", "clear", "infocmp", "infotocap", "ncurses%(version_major)s-config", - "reset", "tabs", "tic", "toe", "tput", "tset"]] + - ['lib/lib%s%s.a' % (x, y) for x in libs for y in ['', '_g', 'w', 'w_g']] + - ['lib/lib%s%s.%s' % (x, y, SHLIB_EXT) for x in libs for y in ['', 'w']] + - ['lib/libncurses++%s.a' % x for x in ['', 'w']], - 'dirs': ['include', 'include/ncursesw'], -} - -moduleclass = 'devel' diff --git a/n/numpy/numpy-1.15.4-Python-3.6.1.eb b/n/numpy/numpy-1.15.4-Python-3.6.1.eb index a8cb9b01..5d6c9fc7 100644 --- a/n/numpy/numpy-1.15.4-Python-3.6.1.eb +++ b/n/numpy/numpy-1.15.4-Python-3.6.1.eb @@ -13,9 +13,9 @@ toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'} source_urls = ['https://github.com/numpy/numpy/releases/download/v%(version)s'] sources = [SOURCE_TAR_GZ] -patch = [ - 'numpy-1.8.1-mkl.patch', - 'numpy-1.11.0-sse42.patch' +local_patch = [ + 'numpy-1.8.1-mkl.local_patch', + 'numpy-1.11.0-sse42.local_patch' ] dependencies = [ diff --git a/o/OpenBLAS/OpenBLAS-0.2.12-GCC-4.9.2-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.12-GCC-4.9.2-LAPACK-3.5.0.eb index 290c9e89..1414bd00 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.12-GCC-4.9.2-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.12-GCC-4.9.2-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.12' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '4.9.2'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.8.4-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.8.4-LAPACK-3.5.0.eb index fb13c2f7..a2624c78 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.8.4-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.8.4-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.13' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '4.8.4'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.9.2-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.9.2-LAPACK-3.5.0.eb index 59f2059a..a7a5951b 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.9.2-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.13-GCC-4.9.2-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.13' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '4.9.2'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.13-gompi-1.5.16-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.13-gompi-1.5.16-LAPACK-3.5.0.eb index 39183745..b31e9b36 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.13-gompi-1.5.16-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.13-gompi-1.5.16-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.13' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'gompi', 'version': '1.5.16'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,16 +29,16 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] -threading = 'USE_THREAD=1' -buildopts = 'BINARY=64 ' + threading + ' CC="$CC" FC="$F77"' -installopts = threading + " PREFIX=%(installdir)s" +local_threading = 'USE_THREAD=1' +buildopts = 'BINARY=64 ' + local_threading + ' CC="$CC" FC="$F77"' +installopts = local_threading + " PREFIX=%(installdir)s" # extensive testing can be enabled by uncommenting the line below #runtest = 'PATH=.:$PATH lapack-timing' diff --git a/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.2-2.25-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.2-2.25-LAPACK-3.5.0.eb index 96dbee91..88237b4c 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.2-2.25-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.2-2.25-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.14' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GNU', 'version': '4.9.2-2.25'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0.eb index 130ef049..78c99ca6 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.14' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GNU', 'version': '4.9.3-2.25'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0.eb index 913850c9..4a307938 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.14' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GNU', 'version': '5.1.0-2.25'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.14-gompi-2015e-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.14-gompi-2015e-LAPACK-3.5.0.eb index ea64c7ef..4e2f2bf2 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.14-gompi-2015e-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.14-gompi-2015e-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.14' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'gompi', 'version': '2015e'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0.eb b/o/OpenBLAS/OpenBLAS-0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0.eb index 2d1c6a9d..23446609 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.15' -lapackver = '3.6.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '4.9.3-2.25'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ @@ -30,9 +30,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0.eb b/o/OpenBLAS/OpenBLAS-0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0.eb index a8ed3ad7..7209617d 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.15' -lapackver = '3.6.0' -versionsuffix = '-LAPACK-%s-gompi-2016a' % lapackver +local_lapackver = '3.6.0' +versionsuffix = '-LAPACK-%s-gompi-2016a' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '5.1.0-local_binutils-2.25'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-4.9.4-2.25-LAPACK-3.6.0.eb b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-4.9.4-2.25-LAPACK-3.6.0.eb index 1b880be8..2ef4662f 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-4.9.4-2.25-LAPACK-3.6.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-4.9.4-2.25-LAPACK-3.6.0.eb @@ -3,27 +3,27 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.18' -lapackver = '3.6.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '4.9.4-2.25'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' -lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' -lapack_unpack_cmd += 'mkdir lapack-netlib;' -lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' +local_lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' +local_lapack_unpack_cmd += 'mkdir lapack-netlib;' +local_lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' sources = [ 'v%(version)s.tar.gz', - (lapack_src, lapack_unpack_cmd), - large_src, - timing_src, + (local_lapack_src, local_lapack_unpack_cmd), + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -34,8 +34,8 @@ source_urls = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.3.0-2.26-LAPACK-3.6.0.eb b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.3.0-2.26-LAPACK-3.6.0.eb index eefce45b..77524faf 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.3.0-2.26-LAPACK-3.6.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.3.0-2.26-LAPACK-3.6.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.18' -lapackver = '3.6.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '5.3.0-2.26'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.0.eb b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.0.eb index e215530e..126356d8 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.0.eb @@ -3,27 +3,27 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.18' -lapackver = '3.6.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '5.4.0-2.26'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' -lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' -lapack_unpack_cmd += 'mkdir lapack-netlib;' -lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' +local_lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' +local_lapack_unpack_cmd += 'mkdir lapack-netlib;' +local_lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' sources = [ 'v%(version)s.tar.gz', - (lapack_src, lapack_unpack_cmd), - large_src, - timing_src, + (local_lapack_src, local_lapack_unpack_cmd), + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -34,8 +34,8 @@ source_urls = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.1.eb b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.1.eb index 5581f5fc..0e949088 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.1.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.1.eb @@ -3,27 +3,27 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.18' -lapackver = '3.6.1' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.1' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '5.4.0-2.26'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' -lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' -lapack_unpack_cmd += 'mkdir lapack-netlib;' -lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' +local_lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' +local_lapack_unpack_cmd += 'mkdir lapack-netlib;' +local_lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' sources = [ 'v%(version)s.tar.gz', - (lapack_src, lapack_unpack_cmd), - large_src, - timing_src, + (local_lapack_src, local_lapack_unpack_cmd), + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -34,8 +34,8 @@ source_urls = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.19-GCC-5.4.0-2.26-LAPACK-3.6.0.eb b/o/OpenBLAS/OpenBLAS-0.2.19-GCC-5.4.0-2.26-LAPACK-3.6.0.eb index 1c615762..7d53fc03 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.19-GCC-5.4.0-2.26-LAPACK-3.6.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.19-GCC-5.4.0-2.26-LAPACK-3.6.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.19' -lapackver = '3.6.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.6.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '5.4.0-2.26'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0.eb b/o/OpenBLAS/OpenBLAS-0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0.eb index 1408ed6b..26c3cbe6 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0.eb @@ -3,27 +3,27 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.19' -lapackver = '3.7.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.7.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' -lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' -lapack_unpack_cmd += 'mkdir lapack-netlib;' -lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' +local_lapack_unpack_cmd = 'cd %(name)s-%(version)s; rm -rf lapack-netlib;' +local_lapack_unpack_cmd += 'mkdir lapack-netlib;' +local_lapack_unpack_cmd += 'tar -C lapack-netlib --strip-local_components=1 -zxf %s; cd -' sources = [ 'v%(version)s.tar.gz', - (lapack_src, lapack_unpack_cmd), - large_src, - timing_src, + (local_lapack_src, local_lapack_unpack_cmd), + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -34,8 +34,8 @@ source_urls = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), 'OpenBLAS-%(version)s_LAPACK-3.7.0-fixes.patch', ] diff --git a/o/OpenBLAS/OpenBLAS-0.2.20-GCC-6.3.0-2.27.eb b/o/OpenBLAS/OpenBLAS-0.2.20-GCC-6.3.0-2.27.eb index 1f0cfc78..34cbe03c 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.20-GCC-6.3.0-2.27.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.20-GCC-6.3.0-2.27.eb @@ -8,8 +8,8 @@ description = "OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'} -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' source_urls = [ # order matters, trying to download the large.tgz/timing.tgz LAPACK @@ -30,8 +30,8 @@ checksums = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), 'OpenBLAS-%(version)s_fix-Intel-L1-cache-size-detection.patch', 'OpenBLAS-%(version)s_revert-honor-cpuset.patch', ] diff --git a/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.1.0-2.30.eb b/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.1.0-2.30.eb index 27c01526..e9b225b7 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.1.0-2.30.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.1.0-2.30.eb @@ -10,8 +10,8 @@ description = "OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD toolchain = {'name': 'GCC', 'version': '8.1.0-2.30'} -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' source_urls = [ # order matters, trying to download the large.tgz/timing.tgz LAPACK @@ -32,8 +32,8 @@ checksums = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), 'OpenBLAS-%(version)s_fix-Intel-L1-cache-size-detection.patch', 'OpenBLAS-%(version)s_revert-honor-cpuset.patch', ] diff --git a/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.3.0-2.32.eb b/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.3.0-2.32.eb index ddb6df08..04e19271 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.3.0-2.32.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.20-GCC-8.3.0-2.32.eb @@ -10,8 +10,8 @@ description = "OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD toolchain = {'name': 'GCC', 'version': '8.3.0-2.32'} -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' source_urls = [ # order matters, trying to download the large.tgz/timing.tgz LAPACK @@ -32,8 +32,8 @@ checksums = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), 'OpenBLAS-%(version)s_fix-Intel-L1-cache-size-detection.patch', 'OpenBLAS-%(version)s_revert-honor-cpuset.patch', ] diff --git a/o/OpenBLAS/OpenBLAS-0.2.20-gompi-2019.02.eb b/o/OpenBLAS/OpenBLAS-0.2.20-gompi-2019.02.eb index b7c520a8..11924b12 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.20-gompi-2019.02.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.20-gompi-2019.02.eb @@ -10,8 +10,8 @@ description = "OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD toolchain = {'name': 'gompi', 'version': '2019.02'} -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' source_urls = [ # order matters, trying to download the large.tgz/timing.tgz LAPACK @@ -32,8 +32,8 @@ checksums = [ ] patches = [ - (large_src, '.'), - (timing_src, '.'), + (local_large_src, '.'), + (local_timing_src, '.'), 'OpenBLAS-%(version)s_fix-Intel-L1-cache-size-detection.patch', 'OpenBLAS-%(version)s_revert-honor-cpuset.patch', ] diff --git a/o/OpenBLAS/OpenBLAS-0.2.6-gompi-1.4.10-LAPACK-3.4.2.eb b/o/OpenBLAS/OpenBLAS-0.2.6-gompi-1.4.10-LAPACK-3.4.2.eb index ff364f55..3e535476 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.6-gompi-1.4.10-LAPACK-3.4.2.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.6-gompi-1.4.10-LAPACK-3.4.2.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.6' -lapackver = '3.4.2' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.4.2' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'gompi', 'version': '1.4.10'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -30,16 +30,16 @@ source_urls = [ patches = [ 'OpenBLAS-%(version)s_Makefile-LAPACK-sources.patch', - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] -threading = 'USE_THREAD=1' -buildopts = 'BINARY=64 ' + threading + ' CC="$CC" FC="$F77"' -installopts = threading + " PREFIX=%(installdir)s" +local_threading = 'USE_THREAD=1' +buildopts = 'BINARY=64 ' + local_threading + ' CC="$CC" FC="$F77"' +installopts = local_threading + " PREFIX=%(installdir)s" # extensive testing can be enabled by uncommenting the line below #runtest = 'PATH=.:$PATH lapack-timing' diff --git a/o/OpenBLAS/OpenBLAS-0.2.6-ictce-5.3.0-LAPACK-3.4.2.eb b/o/OpenBLAS/OpenBLAS-0.2.6-ictce-5.3.0-LAPACK-3.4.2.eb index 11f26390..317a1c55 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.6-ictce-5.3.0-LAPACK-3.4.2.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.6-ictce-5.3.0-LAPACK-3.4.2.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.6' -lapackver = '3.4.2' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.4.2' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'ictce', 'version': '5.3.0'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -30,16 +30,16 @@ source_urls = [ patches = [ 'OpenBLAS-%(version)s_Makefile-LAPACK-sources.patch', - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] -threading = 'USE_THREAD=1' -buildopts = 'BINARY=64 ' + threading + ' CC="$CC" FC="$F77"' -installopts = threading + " PREFIX=%(installdir)s" +local_threading = 'USE_THREAD=1' +buildopts = 'BINARY=64 ' + local_threading + ' CC="$CC" FC="$F77"' +installopts = local_threading + " PREFIX=%(installdir)s" # extensive testing can be enabled by uncommenting the line below #runtest = 'PATH=.:$PATH lapack-timing' diff --git a/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.12-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.12-LAPACK-3.5.0.eb index 521f915c..30587308 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.12-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.12-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.8' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'gompi', 'version': '1.5.12'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,16 +29,16 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] -threading = 'USE_THREAD=1' -buildopts = 'BINARY=64 ' + threading + ' CC="$CC" FC="$F77"' -installopts = threading + " PREFIX=%(installdir)s" +local_threading = 'USE_THREAD=1' +buildopts = 'BINARY=64 ' + local_threading + ' CC="$CC" FC="$F77"' +installopts = local_threading + " PREFIX=%(installdir)s" # extensive testing can be enabled by uncommenting the line below #runtest = 'PATH=.:$PATH lapack-timing' diff --git a/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.14-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.14-LAPACK-3.5.0.eb index 8feedd4e..0aa9e318 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.14-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.5.14-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.8' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'gompi', 'version': '1.5.14'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,16 +29,16 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] -threading = 'USE_THREAD=1' -buildopts = 'BINARY=64 ' + threading + ' CC="$CC" FC="$F77"' -installopts = threading + " PREFIX=%(installdir)s" +local_threading = 'USE_THREAD=1' +buildopts = 'BINARY=64 ' + local_threading + ' CC="$CC" FC="$F77"' +installopts = local_threading + " PREFIX=%(installdir)s" # extensive testing can be enabled by uncommenting the line below #runtest = 'PATH=.:$PATH lapack-timing' diff --git a/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.6.10-LAPACK-3.4.2.eb b/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.6.10-LAPACK-3.4.2.eb index 7e1666c3..4f4713cc 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.6.10-LAPACK-3.4.2.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.8-gompi-1.6.10-LAPACK-3.4.2.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.8' -lapackver = '3.4.2' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.4.2' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'gompi', 'version': '1.6.10'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,16 +29,16 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] -threading = 'USE_THREAD=1' -buildopts = 'BINARY=64 ' + threading + ' CC="$CC" FC="$F77"' -installopts = threading + " PREFIX=%(installdir)s" +local_threading = 'USE_THREAD=1' +buildopts = 'BINARY=64 ' + local_threading + ' CC="$CC" FC="$F77"' +installopts = local_threading + " PREFIX=%(installdir)s" # extensive testing can be enabled by uncommenting the line below #runtest = 'PATH=.:$PATH lapack-timing' diff --git a/o/OpenBLAS/OpenBLAS-0.2.8-ictce-5.3.0-LAPACK-3.4.2.eb b/o/OpenBLAS/OpenBLAS-0.2.8-ictce-5.3.0-LAPACK-3.4.2.eb index b6610d4f..e80ae691 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.8-ictce-5.3.0-LAPACK-3.4.2.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.8-ictce-5.3.0-LAPACK-3.4.2.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.8' -lapackver = '3.4.2' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.4.2' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'ictce', 'version': '5.3.0'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,16 +29,16 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] -threading = 'USE_THREAD=1' -buildopts = 'BINARY=64 ' + threading + ' CC="$CC" FC="$F77"' -installopts = threading + " PREFIX=%(installdir)s" +local_threading = 'USE_THREAD=1' +buildopts = 'BINARY=64 ' + local_threading + ' CC="$CC" FC="$F77"' +installopts = local_threading + " PREFIX=%(installdir)s" # extensive testing can be enabled by uncommenting the line below #runtest = 'PATH=.:$PATH lapack-timing' diff --git a/o/OpenBLAS/OpenBLAS-0.2.9-GCC-4.8.3-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.9-GCC-4.8.3-LAPACK-3.5.0.eb index ae911858..d2e09f64 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.9-GCC-4.8.3-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.9-GCC-4.8.3-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.9' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = {'name': 'GCC', 'version': '4.8.3'} -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenBLAS/OpenBLAS-0.2.9-LAPACK-3.5.0.eb b/o/OpenBLAS/OpenBLAS-0.2.9-LAPACK-3.5.0.eb index 3d5d9ec7..017bad3b 100644 --- a/o/OpenBLAS/OpenBLAS-0.2.9-LAPACK-3.5.0.eb +++ b/o/OpenBLAS/OpenBLAS-0.2.9-LAPACK-3.5.0.eb @@ -3,22 +3,22 @@ easyblock = 'ConfigureMake' name = 'OpenBLAS' version = '0.2.9' -lapackver = '3.5.0' -versionsuffix = '-LAPACK-%s' % lapackver +local_lapackver = '3.5.0' +versionsuffix = '-LAPACK-%s' % local_lapackver homepage = 'http://xianyi.github.com/OpenBLAS/' description = """OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.""" toolchain = SYSTEM -lapack_src = 'lapack-%s.tgz' % lapackver -large_src = 'large.tgz' -timing_src = 'timing.tgz' +local_lapack_src = 'lapack-%s.tgz' % local_lapackver +local_large_src = 'large.tgz' +local_timing_src = 'timing.tgz' sources = [ 'v%(version)s.tar.gz', - lapack_src, - large_src, - timing_src, + local_lapack_src, + local_large_src, + local_timing_src, ] source_urls = [ # order matters, trying to download the LAPACK tarball from GitHub causes @@ -29,9 +29,9 @@ source_urls = [ ] patches = [ - (lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir - (large_src, '.'), - (timing_src, '.'), + (local_lapack_src, '.'), # copy LAPACK tarball to unpacked OpenBLAS dir + (local_large_src, '.'), + (local_timing_src, '.'), ] skipsteps = ['configure'] diff --git a/o/OpenMPI/OpenMPI-1.10.1-GCC-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.10.1-GCC-4.9.3-2.25.eb index 94bc5deb..a7faffc1 100644 --- a/o/OpenMPI/OpenMPI-1.10.1-GCC-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.10.1-GCC-4.9.3-2.25.eb @@ -30,7 +30,7 @@ configopts += '--enable-mpi-java ' # Java support RT#4090 # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -51,7 +51,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.1-GNU-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.10.1-GNU-4.9.3-2.25.eb index 2999744d..609a021e 100644 --- a/o/OpenMPI/OpenMPI-1.10.1-GNU-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.10.1-GNU-4.9.3-2.25.eb @@ -33,7 +33,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -54,7 +54,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.2-GCC-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.10.2-GCC-4.9.3-2.25.eb index 08764502..79eaf73a 100644 --- a/o/OpenMPI/OpenMPI-1.10.2-GCC-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.10.2-GCC-4.9.3-2.25.eb @@ -35,7 +35,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -56,7 +56,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.2-GCC-5.3.0-2.26.eb b/o/OpenMPI/OpenMPI-1.10.2-GCC-5.3.0-2.26.eb index 68b8026b..016e5c0e 100644 --- a/o/OpenMPI/OpenMPI-1.10.2-GCC-5.3.0-2.26.eb +++ b/o/OpenMPI/OpenMPI-1.10.2-GCC-5.3.0-2.26.eb @@ -33,7 +33,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -54,7 +54,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.2-GCC-6.1.0-2.27.eb b/o/OpenMPI/OpenMPI-1.10.2-GCC-6.1.0-2.27.eb index b61d4fc1..d8de6921 100644 --- a/o/OpenMPI/OpenMPI-1.10.2-GCC-6.1.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-1.10.2-GCC-6.1.0-2.27.eb @@ -26,7 +26,7 @@ configopts += '--disable-dlopen ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -47,7 +47,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.2-PGI-16.3-GCC-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.10.2-PGI-16.3-GCC-4.9.3-2.25.eb index 02d3ea2d..e264715c 100644 --- a/o/OpenMPI/OpenMPI-1.10.2-PGI-16.3-GCC-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.10.2-PGI-16.3-GCC-4.9.3-2.25.eb @@ -25,7 +25,7 @@ dependencies = [('hwloc', '1.11.3')] # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -46,7 +46,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.2-PGI-16.4-GCC-5.3.0-2.26.eb b/o/OpenMPI/OpenMPI-1.10.2-PGI-16.4-GCC-5.3.0-2.26.eb index d03de9eb..4ea0e517 100644 --- a/o/OpenMPI/OpenMPI-1.10.2-PGI-16.4-GCC-5.3.0-2.26.eb +++ b/o/OpenMPI/OpenMPI-1.10.2-PGI-16.4-GCC-5.3.0-2.26.eb @@ -25,7 +25,7 @@ dependencies = [('hwloc', '1.11.3')] # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -46,7 +46,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.3-GCC-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.10.3-GCC-4.9.3-2.25.eb index b354fb0d..e2b59ef9 100644 --- a/o/OpenMPI/OpenMPI-1.10.3-GCC-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.10.3-GCC-4.9.3-2.25.eb @@ -24,7 +24,7 @@ configopts += '--disable-dlopen ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -45,7 +45,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.3-GCC-6.1.0-2.27.eb b/o/OpenMPI/OpenMPI-1.10.3-GCC-6.1.0-2.27.eb index 282c6a50..0a1cff84 100644 --- a/o/OpenMPI/OpenMPI-1.10.3-GCC-6.1.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-1.10.3-GCC-6.1.0-2.27.eb @@ -26,7 +26,7 @@ configopts += '--disable-dlopen ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -47,7 +47,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.4-PGI-16.7-GCC-5.4.0-2.26.eb b/o/OpenMPI/OpenMPI-1.10.4-PGI-16.7-GCC-5.4.0-2.26.eb index 327238e8..cdf8b112 100644 --- a/o/OpenMPI/OpenMPI-1.10.4-PGI-16.7-GCC-5.4.0-2.26.eb +++ b/o/OpenMPI/OpenMPI-1.10.4-PGI-16.7-GCC-5.4.0-2.26.eb @@ -27,7 +27,7 @@ dependencies = [('hwloc', '1.11.4')] # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -48,7 +48,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.7-GCC-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.10.7-GCC-4.9.3-2.25.eb index 08764502..79eaf73a 100644 --- a/o/OpenMPI/OpenMPI-1.10.7-GCC-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.10.7-GCC-4.9.3-2.25.eb @@ -35,7 +35,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -56,7 +56,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-noPBS.eb b/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-noPBS.eb index 60f863e3..e4f40047 100644 --- a/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-noPBS.eb +++ b/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-noPBS.eb @@ -28,7 +28,7 @@ configopts += '--disable-dlopen ' # needed for --with-verbs #osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -49,7 +49,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-uv.eb b/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-uv.eb index 26354b67..01689dbf 100644 --- a/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-uv.eb +++ b/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27-uv.eb @@ -34,7 +34,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs #osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -55,7 +55,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27.eb index 8d84c213..88323016 100644 --- a/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27.eb @@ -27,7 +27,7 @@ configopts += '--with-tm=/opt/pbs ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -48,7 +48,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.7-GCC-7.1.0-2.28.eb b/o/OpenMPI/OpenMPI-1.10.7-GCC-7.1.0-2.28.eb index 67b62952..3f553c81 100644 --- a/o/OpenMPI/OpenMPI-1.10.7-GCC-7.1.0-2.28.eb +++ b/o/OpenMPI/OpenMPI-1.10.7-GCC-7.1.0-2.28.eb @@ -33,7 +33,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -54,7 +54,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.10.7-PGI-18.5-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-1.10.7-PGI-18.5-GCC-6.3.0-2.27.eb index 10c54fff..a2cb6388 100644 --- a/o/OpenMPI/OpenMPI-1.10.7-PGI-18.5-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-1.10.7-PGI-18.5-GCC-6.3.0-2.27.eb @@ -31,7 +31,7 @@ preconfigopts = 'export LIBS="-ldl" && export CC="pgcc -noswitcherror" && export # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -53,7 +53,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.6.5-GCC-4.8.3.eb b/o/OpenMPI/OpenMPI-1.6.5-GCC-4.8.3.eb index b7cc533c..e57f4b47 100644 --- a/o/OpenMPI/OpenMPI-1.6.5-GCC-4.8.3.eb +++ b/o/OpenMPI/OpenMPI-1.6.5-GCC-4.8.3.eb @@ -28,7 +28,7 @@ dependencies = [('hwloc', '1.8.1')] # needed for --with-openib osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_f77", "mpi_f90", @@ -50,7 +50,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ @@ -64,6 +64,6 @@ sanity_check_paths = { 'dirs': ["include/openmpi/ompi/mpi/cxx"], } -opt = True +local_opt = True moduleclass = 'mpi' diff --git a/o/OpenMPI/OpenMPI-1.8.6-GCC-4.4.7-system.eb b/o/OpenMPI/OpenMPI-1.8.6-GCC-4.4.7-system.eb index 9dd3341a..7793577e 100644 --- a/o/OpenMPI/OpenMPI-1.8.6-GCC-4.4.7-system.eb +++ b/o/OpenMPI/OpenMPI-1.8.6-GCC-4.4.7-system.eb @@ -31,7 +31,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), 'hwloc'] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -52,7 +52,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.8.6-GNU-4.4.7-system.eb b/o/OpenMPI/OpenMPI-1.8.6-GNU-4.4.7-system.eb index 46c0a391..42a67749 100644 --- a/o/OpenMPI/OpenMPI-1.8.6-GNU-4.4.7-system.eb +++ b/o/OpenMPI/OpenMPI-1.8.6-GNU-4.4.7-system.eb @@ -30,7 +30,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), 'hwloc'] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -51,7 +51,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.8.6-GNU-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.8.6-GNU-4.9.3-2.25.eb index a4e3f52a..4329a620 100644 --- a/o/OpenMPI/OpenMPI-1.8.6-GNU-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.8.6-GNU-4.9.3-2.25.eb @@ -30,7 +30,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -51,7 +51,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.8.6-GNU-5.1.0-2.25.eb b/o/OpenMPI/OpenMPI-1.8.6-GNU-5.1.0-2.25.eb index 9a00269b..c448aff4 100644 --- a/o/OpenMPI/OpenMPI-1.8.6-GNU-5.1.0-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.8.6-GNU-5.1.0-2.25.eb @@ -30,7 +30,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -51,7 +51,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.8.6-iccifort-2015.3.187-GNU-5.1.0-2.25.eb b/o/OpenMPI/OpenMPI-1.8.6-iccifort-2015.3.187-GNU-5.1.0-2.25.eb index d88a1706..78dca634 100644 --- a/o/OpenMPI/OpenMPI-1.8.6-iccifort-2015.3.187-GNU-5.1.0-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.8.6-iccifort-2015.3.187-GNU-5.1.0-2.25.eb @@ -31,7 +31,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -52,7 +52,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.8.8-GNU-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.8.8-GNU-4.9.3-2.25.eb index fa61e4f8..b5ec124d 100644 --- a/o/OpenMPI/OpenMPI-1.8.8-GNU-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.8.8-GNU-4.9.3-2.25.eb @@ -31,7 +31,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -52,7 +52,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.8.8-GNU-5.1.0-2.25.eb b/o/OpenMPI/OpenMPI-1.8.8-GNU-5.1.0-2.25.eb index ae94ace0..bb0a47a1 100644 --- a/o/OpenMPI/OpenMPI-1.8.8-GNU-5.1.0-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.8.8-GNU-5.1.0-2.25.eb @@ -30,7 +30,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -51,7 +51,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25.eb index 148c9bb8..5200dfd6 100644 --- a/o/OpenMPI/OpenMPI-1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25.eb @@ -30,7 +30,7 @@ dependencies = [('hwloc', '1.11.1')] # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -51,7 +51,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-2.0.0-GCC-5.2.0.eb b/o/OpenMPI/OpenMPI-2.0.0-GCC-5.2.0.eb index b3c0284c..21c10677 100644 --- a/o/OpenMPI/OpenMPI-2.0.0-GCC-5.2.0.eb +++ b/o/OpenMPI/OpenMPI-2.0.0-GCC-5.2.0.eb @@ -28,7 +28,7 @@ osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ] # VampirTrace is no longer used : # https://www.open-mpi.org/community/lists/announce/2016/07/0085.php -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % @@ -39,7 +39,7 @@ sanity_check_paths = { [ "lib/lib%s.%s" % (libfile, - SHLIB_EXT) for libfile in libs] + + SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ diff --git a/o/OpenMPI/OpenMPI-2.0.1-GCC-6.2.0-2.27.eb b/o/OpenMPI/OpenMPI-2.0.1-GCC-6.2.0-2.27.eb index 76991d97..8e025e4a 100644 --- a/o/OpenMPI/OpenMPI-2.0.1-GCC-6.2.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-2.0.1-GCC-6.2.0-2.27.eb @@ -26,14 +26,14 @@ configopts += '--disable-dlopen ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.0.1-gcccuda-2016.10.eb b/o/OpenMPI/OpenMPI-2.0.1-gcccuda-2016.10.eb index 4dee08f7..d44749f2 100644 --- a/o/OpenMPI/OpenMPI-2.0.1-gcccuda-2016.10.eb +++ b/o/OpenMPI/OpenMPI-2.0.1-gcccuda-2016.10.eb @@ -26,14 +26,14 @@ configopts += '--with-cuda=$CUDA_HOME ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-5.4.0-2.26.eb b/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-5.4.0-2.26.eb index 8d56e141..175d29e6 100644 --- a/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-5.4.0-2.26.eb +++ b/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-5.4.0-2.26.eb @@ -34,7 +34,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", diff --git a/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-6.3.0-2.27.eb index 969bb61c..6d19bcb0 100644 --- a/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-2.0.1-iccifort-2017.1.132-GCC-6.3.0-2.27.eb @@ -36,7 +36,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", diff --git a/o/OpenMPI/OpenMPI-2.0.1.eb b/o/OpenMPI/OpenMPI-2.0.1.eb index e7e7ef94..226ea839 100644 --- a/o/OpenMPI/OpenMPI-2.0.1.eb +++ b/o/OpenMPI/OpenMPI-2.0.1.eb @@ -34,7 +34,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -57,7 +57,7 @@ sanity_check_paths = { binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [""], } diff --git a/o/OpenMPI/OpenMPI-2.0.2-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-2.0.2-GCC-6.3.0-2.27.eb index 4a0f8945..3b4974b8 100644 --- a/o/OpenMPI/OpenMPI-2.0.2-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-2.0.2-GCC-6.3.0-2.27.eb @@ -33,7 +33,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] modextravars = {'OMPI_MCA_btl_openib_if_include': 'mlx4_0', 'OMPI_MCA_oob_tcp_if_include': '10.0.0.0/8', @@ -45,7 +45,7 @@ sanity_check_paths = { binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.0-GCC-4.9.3-2.25.eb b/o/OpenMPI/OpenMPI-2.1.0-GCC-4.9.3-2.25.eb index f14d3e6d..077bbd08 100644 --- a/o/OpenMPI/OpenMPI-2.1.0-GCC-4.9.3-2.25.eb +++ b/o/OpenMPI/OpenMPI-2.1.0-GCC-4.9.3-2.25.eb @@ -33,7 +33,7 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", @@ -46,7 +46,7 @@ libs = [ "vt-mpi-unify"] # sanity_check_paths = { # 'files': ["bin/%s" % binfile for binfile in ["ompi_info", "opal_wrapper", "orterun"]] + -# ["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in libs] + +# ["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in local_libs] + # ["include/%s.h" % x for x in ["mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], # 'dirs': ["include/openmpi/ompi/mpi/cxx"], #} diff --git a/o/OpenMPI/OpenMPI-2.1.0-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-2.1.0-GCC-6.3.0-2.27.eb index 2bc19054..30915125 100644 --- a/o/OpenMPI/OpenMPI-2.1.0-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-2.1.0-GCC-6.3.0-2.27.eb @@ -38,14 +38,14 @@ configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27-uv.eb b/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27-uv.eb index 600cb934..2a6dc518 100644 --- a/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27-uv.eb +++ b/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27-uv.eb @@ -38,14 +38,14 @@ configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings # needed for --with-verbs # osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27.eb index 0e3c17f7..6f8fa813 100644 --- a/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27.eb @@ -36,14 +36,14 @@ configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.1-GCC-7.1.0-2.28.eb b/o/OpenMPI/OpenMPI-2.1.1-GCC-7.1.0-2.28.eb index ef82e60b..967ad90e 100644 --- a/o/OpenMPI/OpenMPI-2.1.1-GCC-7.1.0-2.28.eb +++ b/o/OpenMPI/OpenMPI-2.1.1-GCC-7.1.0-2.28.eb @@ -33,14 +33,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.1-GCC-7.3.0-2.30.eb b/o/OpenMPI/OpenMPI-2.1.1-GCC-7.3.0-2.30.eb index 749c6d0c..ce754239 100644 --- a/o/OpenMPI/OpenMPI-2.1.1-GCC-7.3.0-2.30.eb +++ b/o/OpenMPI/OpenMPI-2.1.1-GCC-7.3.0-2.30.eb @@ -35,14 +35,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.1-GCC-8.1.0-2.30.eb b/o/OpenMPI/OpenMPI-2.1.1-GCC-8.1.0-2.30.eb index 83ac56c1..cc5d8ba3 100644 --- a/o/OpenMPI/OpenMPI-2.1.1-GCC-8.1.0-2.30.eb +++ b/o/OpenMPI/OpenMPI-2.1.1-GCC-8.1.0-2.30.eb @@ -35,14 +35,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.1-c7.eb b/o/OpenMPI/OpenMPI-2.1.1-c7.eb index 810848cb..463b7363 100644 --- a/o/OpenMPI/OpenMPI-2.1.1-c7.eb +++ b/o/OpenMPI/OpenMPI-2.1.1-c7.eb @@ -33,14 +33,14 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS # needed for --with-verbs osdependencies = [('libibverbs-dev', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27-noPBS.eb b/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27-noPBS.eb index 333feb63..ce5fa6ab 100644 --- a/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27-noPBS.eb +++ b/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27-noPBS.eb @@ -34,14 +34,14 @@ configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27.eb index 2372c4fd..ef805eaf 100644 --- a/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-2.1.5-GCC-6.3.0-2.27.eb @@ -33,14 +33,14 @@ configopts += '--with-ucx=$EBROOTUCX ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-2.1.5-GCC-9.1.0-2.32.eb b/o/OpenMPI/OpenMPI-2.1.5-GCC-9.1.0-2.32.eb index 66a19be4..0ad4352d 100644 --- a/o/OpenMPI/OpenMPI-2.1.5-GCC-9.1.0-2.32.eb +++ b/o/OpenMPI/OpenMPI-2.1.5-GCC-9.1.0-2.32.eb @@ -34,14 +34,14 @@ configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27-uv.eb b/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27-uv.eb index 7caf9b8f..a5420b2c 100644 --- a/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27-uv.eb +++ b/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27-uv.eb @@ -42,14 +42,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs #osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27.eb index 9cdad4c6..f1301c1f 100644 --- a/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-3.0.0-GCC-6.3.0-2.27.eb @@ -41,14 +41,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.0.0-GCC-7.2.0-2.29.eb b/o/OpenMPI/OpenMPI-3.0.0-GCC-7.2.0-2.29.eb index d7eed339..509f506a 100644 --- a/o/OpenMPI/OpenMPI-3.0.0-GCC-7.2.0-2.29.eb +++ b/o/OpenMPI/OpenMPI-3.0.0-GCC-7.2.0-2.29.eb @@ -41,14 +41,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia-RHEL6.eb b/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia-RHEL6.eb index a439f2be..5b412374 100644 --- a/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia-RHEL6.eb +++ b/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia-RHEL6.eb @@ -45,14 +45,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia.eb b/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia.eb index 4027fb4e..103e3a03 100644 --- a/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia.eb +++ b/o/OpenMPI/OpenMPI-3.0.1-GCC-6.3.0-2.27-nvidia.eb @@ -45,14 +45,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.3-GCC-8.2.0-2.31.1.eb b/o/OpenMPI/OpenMPI-3.1.3-GCC-8.2.0-2.31.1.eb index 95d872f8..97b84826 100644 --- a/o/OpenMPI/OpenMPI-3.1.3-GCC-8.2.0-2.31.1.eb +++ b/o/OpenMPI/OpenMPI-3.1.3-GCC-8.2.0-2.31.1.eb @@ -39,10 +39,10 @@ configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support # to enable SLURM integration (site-specific) # configopts += '--with-slurm --with-pmi=/usr/include/slurm --with-pmi-libdir=/usr' -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': ["bin/%s" % binfile for binfile in ["ompi_info", "opal_wrapper", "orterun"]] + - ["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in libs] + + ["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in local_libs] + ["include/%s.h" % x for x in ["mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.3-GCCcore-8.3.0.eb b/o/OpenMPI/OpenMPI-3.1.3-GCCcore-8.3.0.eb index 6fe824f0..1099bc63 100644 --- a/o/OpenMPI/OpenMPI-3.1.3-GCCcore-8.3.0.eb +++ b/o/OpenMPI/OpenMPI-3.1.3-GCCcore-8.3.0.eb @@ -26,14 +26,14 @@ configopts += '--with-ucx=$EBROOTUCX ' osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.3-PGI-19.4-GCC-8.2.0-2.31.1.eb b/o/OpenMPI/OpenMPI-3.1.3-PGI-19.4-GCC-8.2.0-2.31.1.eb index 3d85da92..05ae3b2f 100644 --- a/o/OpenMPI/OpenMPI-3.1.3-PGI-19.4-GCC-8.2.0-2.31.1.eb +++ b/o/OpenMPI/OpenMPI-3.1.3-PGI-19.4-GCC-8.2.0-2.31.1.eb @@ -45,7 +45,7 @@ preconfigopts = 'export LIBS="-ldl" && export CC="pgcc -noswitcherror" && export # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", diff --git a/o/OpenMPI/OpenMPI-3.1.4-GCC-10.2.0.eb b/o/OpenMPI/OpenMPI-3.1.4-GCC-10.2.0.eb index 34fd4837..6e7a6866 100644 --- a/o/OpenMPI/OpenMPI-3.1.4-GCC-10.2.0.eb +++ b/o/OpenMPI/OpenMPI-3.1.4-GCC-10.2.0.eb @@ -32,14 +32,14 @@ configopts += '--disable-builtin-atomics ' # RT35770 osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-noPBS.eb b/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-noPBS.eb index 86049ec4..866b54bc 100644 --- a/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-noPBS.eb +++ b/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-noPBS.eb @@ -38,14 +38,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-nvidia.eb b/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-nvidia.eb index ae9b6ae4..95b22480 100644 --- a/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-nvidia.eb +++ b/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27-nvidia.eb @@ -46,14 +46,14 @@ preconfigopts = 'export LIBS="-ldl" && ' # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27.eb index 72730a99..f332d46d 100644 --- a/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27.eb @@ -30,14 +30,14 @@ configopts += '--with-ucx=$EBROOTUCX ' osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.4-GCC-8.3.0-2.32.eb b/o/OpenMPI/OpenMPI-3.1.4-GCC-8.3.0-2.32.eb index ee335598..efc3bac5 100644 --- a/o/OpenMPI/OpenMPI-3.1.4-GCC-8.3.0-2.32.eb +++ b/o/OpenMPI/OpenMPI-3.1.4-GCC-8.3.0-2.32.eb @@ -31,14 +31,14 @@ configopts += '--with-ucx=$EBROOTUCX ' osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.4-PGI-19.7-GCC-8.2.0-2.31.1.eb b/o/OpenMPI/OpenMPI-3.1.4-PGI-19.7-GCC-8.2.0-2.31.1.eb index 2b265384..1896760f 100644 --- a/o/OpenMPI/OpenMPI-3.1.4-PGI-19.7-GCC-8.2.0-2.31.1.eb +++ b/o/OpenMPI/OpenMPI-3.1.4-PGI-19.7-GCC-8.2.0-2.31.1.eb @@ -42,7 +42,7 @@ preconfigopts = 'export LIBS="-ldl" && export CC="pgcc -noswitcherror" && export # needed for --with-verbs osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = [ +local_libs = [ "mpi_cxx", "mpi_mpifh", "mpi", diff --git a/o/OpenMPI/OpenMPI-3.1.5-GCCcore-8.3.0.eb b/o/OpenMPI/OpenMPI-3.1.5-GCCcore-8.3.0.eb index 29cc26b5..c976c477 100644 --- a/o/OpenMPI/OpenMPI-3.1.5-GCCcore-8.3.0.eb +++ b/o/OpenMPI/OpenMPI-3.1.5-GCCcore-8.3.0.eb @@ -26,14 +26,14 @@ configopts += '--with-ucx=$EBROOTUCX ' osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.5.eb b/o/OpenMPI/OpenMPI-3.1.5.eb index ad22f7bb..10511381 100644 --- a/o/OpenMPI/OpenMPI-3.1.5.eb +++ b/o/OpenMPI/OpenMPI-3.1.5.eb @@ -26,14 +26,14 @@ configopts += '--with-ucx=$EBROOTUCX ' osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0-noPBS.eb b/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0-noPBS.eb index 51f48d75..be50d31a 100644 --- a/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0-noPBS.eb +++ b/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0-noPBS.eb @@ -27,14 +27,14 @@ configopts = '--with-ucx=$EBROOTUCX --enable-orterun-prefix-by-default' osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0.eb b/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0.eb index f12f28d7..dfd35431 100644 --- a/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0.eb +++ b/o/OpenMPI/OpenMPI-3.1.6-GCCcore-8.3.0.eb @@ -26,14 +26,14 @@ configopts += '--with-ucx=$EBROOTUCX ' osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27-noPBS.eb b/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27-noPBS.eb index 618934f4..c5c05248 100644 --- a/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27-noPBS.eb +++ b/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27-noPBS.eb @@ -47,14 +47,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27.eb b/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27.eb index a43a6af7..f790f9b6 100644 --- a/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27.eb +++ b/o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27.eb @@ -43,14 +43,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.2-GCC-8.3.0-2.32.eb b/o/OpenMPI/OpenMPI-4.0.2-GCC-8.3.0-2.32.eb index a78cbf94..b744af5a 100644 --- a/o/OpenMPI/OpenMPI-4.0.2-GCC-8.3.0-2.32.eb +++ b/o/OpenMPI/OpenMPI-4.0.2-GCC-8.3.0-2.32.eb @@ -35,14 +35,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.4-GCC-8.3.0-2.32-CUDA.eb b/o/OpenMPI/OpenMPI-4.0.4-GCC-8.3.0-2.32-CUDA.eb index faf7168e..9c64b3ea 100644 --- a/o/OpenMPI/OpenMPI-4.0.4-GCC-8.3.0-2.32-CUDA.eb +++ b/o/OpenMPI/OpenMPI-4.0.4-GCC-8.3.0-2.32-CUDA.eb @@ -39,14 +39,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0-without-verbs.eb b/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0-without-verbs.eb index 43a65234..2f34db28 100644 --- a/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0-without-verbs.eb +++ b/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0-without-verbs.eb @@ -37,14 +37,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0.eb b/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0.eb index 1ca6e048..9afc2b7e 100644 --- a/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0.eb +++ b/o/OpenMPI/OpenMPI-4.0.4-GCC-9.3.0.eb @@ -36,14 +36,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.4-GCCcore-8.3.0.eb b/o/OpenMPI/OpenMPI-4.0.4-GCCcore-8.3.0.eb index e15fcc24..073ed5ac 100644 --- a/o/OpenMPI/OpenMPI-4.0.4-GCCcore-8.3.0.eb +++ b/o/OpenMPI/OpenMPI-4.0.4-GCCcore-8.3.0.eb @@ -37,14 +37,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-1.8.0_221.eb b/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-1.8.0_221.eb index 9420e2bd..ae53b6ad 100644 --- a/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-1.8.0_221.eb +++ b/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-1.8.0_221.eb @@ -38,14 +38,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-13.0.1.eb b/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-13.0.1.eb index fba55e83..9290591e 100644 --- a/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-13.0.1.eb +++ b/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-13.0.1.eb @@ -42,14 +42,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0.eb b/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0.eb index a65f14ae..54542c9a 100644 --- a/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0.eb +++ b/o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0.eb @@ -39,14 +39,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2-devel.eb b/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2-devel.eb index 7401dda1..08806dc6 100644 --- a/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2-devel.eb +++ b/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2-devel.eb @@ -36,7 +36,7 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ @@ -44,7 +44,7 @@ sanity_check_paths = { binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2.eb b/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2.eb index 0a5e097c..5b215b11 100644 --- a/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2.eb +++ b/o/OpenMPI/OpenMPI-4.0.5-GCCcore-9.3.0-CUDA-11.2.2.eb @@ -35,7 +35,7 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ @@ -43,7 +43,7 @@ sanity_check_paths = { binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0-Java-1.8.0_221.eb b/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0-Java-1.8.0_221.eb index 27aeec24..0c9d80d4 100644 --- a/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0-Java-1.8.0_221.eb +++ b/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0-Java-1.8.0_221.eb @@ -38,14 +38,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0.eb b/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0.eb index 1c66b075..9b33bedb 100644 --- a/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0.eb +++ b/o/OpenMPI/OpenMPI-4.1.1-GCC-10.2.0.eb @@ -35,14 +35,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.1.1-GCC-11.2.0.eb b/o/OpenMPI/OpenMPI-4.1.1-GCC-11.2.0.eb index a150076e..0eb1cd7b 100644 --- a/o/OpenMPI/OpenMPI-4.1.1-GCC-11.2.0.eb +++ b/o/OpenMPI/OpenMPI-4.1.1-GCC-11.2.0.eb @@ -57,14 +57,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0-Java-1.8.0_221.eb b/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0-Java-1.8.0_221.eb index bd7560e4..22e65765 100644 --- a/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0-Java-1.8.0_221.eb +++ b/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0-Java-1.8.0_221.eb @@ -43,14 +43,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0.eb b/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0.eb index 33499ad7..815570c7 100644 --- a/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0.eb +++ b/o/OpenMPI/OpenMPI-4.1.2-GCC-11.2.0.eb @@ -40,14 +40,14 @@ postinstallcmds = [ 'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf', ] -libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] +local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"] sanity_check_paths = { 'files': [ "bin/%s" % binfile for binfile in [ "ompi_info", "opal_wrapper", "orterun"]] + [ "lib/lib%s.%s" % - (libfile, SHLIB_EXT) for libfile in libs] + [ + (libfile, SHLIB_EXT) for libfile in local_libs] + [ "include/%s.h" % x for x in [ "mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], } diff --git a/o/orthomcl/orthomcl-2.0.8-goolf-1.4.10-Perl-5.16.3.eb b/o/orthomcl/orthomcl-2.0.8-goolf-1.4.10-Perl-5.16.3.eb index 8f31632b..20b4fe83 100644 --- a/o/orthomcl/orthomcl-2.0.8-goolf-1.4.10-Perl-5.16.3.eb +++ b/o/orthomcl/orthomcl-2.0.8-goolf-1.4.10-Perl-5.16.3.eb @@ -15,14 +15,14 @@ source_urls = [ version.split('.')[ :2])] -patches = ['orthomcl_fix-perl-hashbang.patch'] +patches = ['orthomcl_fix-local_perl-hashbang.patch'] # a Perl installation providing the DBI module is required -perl = 'Perl' -perlver = '5.16.3' -versionsuffix = '-%s-%s' % (perl, perlver) +local_perl = 'Perl' +local_perlver = '5.16.3' +versionsuffix = '-%s-%s' % (local_perl, local_perlver) dependencies = [ - (perl, perlver), + (local_perl, local_perlver), ('MCL', '12.135'), ] @@ -47,11 +47,11 @@ sanity_check_paths = { 'Singletons', 'SortGroupMembersByScore', 'SortGroupsFile']], - 'dirs': ['lib/perl/OrthoMCLEngine'], + 'dirs': ['lib/local_perl/OrthoMCLEngine'], } -modextrapaths = {'PERL5LIB': 'lib/perl'} +modextrapaths = {'PERL5LIB': 'lib/local_perl'} -sanity_check_commands = [('perl', '-e "use OrthoMCLEngine::Main::Base"')] +sanity_check_commands = [('local_perl', '-e "use OrthoMCLEngine::Main::Base"')] moduleclass = 'bio' diff --git a/o/orthomcl/orthomcl-2.0.8-ictce-5.3.0-Perl-5.16.3.eb b/o/orthomcl/orthomcl-2.0.8-ictce-5.3.0-Perl-5.16.3.eb index e433fff3..71aa8e73 100644 --- a/o/orthomcl/orthomcl-2.0.8-ictce-5.3.0-Perl-5.16.3.eb +++ b/o/orthomcl/orthomcl-2.0.8-ictce-5.3.0-Perl-5.16.3.eb @@ -15,14 +15,14 @@ source_urls = [ version.split('.')[ :2])] -patches = ['orthomcl_fix-perl-hashbang.patch'] +patches = ['orthomcl_fix-local_perl-hashbang.patch'] # a Perl installation providing the DBI module is required -perl = 'Perl' -perlver = '5.16.3' -versionsuffix = '-%s-%s' % (perl, perlver) +local_perl = 'Perl' +local_perlver = '5.16.3' +versionsuffix = '-%s-%s' % (local_perl, local_perlver) dependencies = [ - (perl, perlver), + (local_perl, local_perlver), ('MCL', '12.135'), ] @@ -47,11 +47,11 @@ sanity_check_paths = { 'Singletons', 'SortGroupMembersByScore', 'SortGroupsFile']], - 'dirs': ['lib/perl/OrthoMCLEngine'], + 'dirs': ['lib/local_perl/OrthoMCLEngine'], } -modextrapaths = {'PERL5LIB': 'lib/perl'} +modextrapaths = {'PERL5LIB': 'lib/local_perl'} -sanity_check_commands = [('perl', '-e "use OrthoMCLEngine::Main::Base"')] +sanity_check_commands = [('local_perl', '-e "use OrthoMCLEngine::Main::Base"')] moduleclass = 'bio' diff --git a/p/PGI/PGI-15.7-GNU-4.9.2-2.25.eb b/p/PGI/PGI-15.7-GNU-4.9.2-2.25.eb index 9b970aab..313e5f39 100644 --- a/p/PGI/PGI-15.7-GNU-4.9.2-2.25.eb +++ b/p/PGI/PGI-15.7-GNU-4.9.2-2.25.eb @@ -9,11 +9,11 @@ toolchain = SYSTEM sources = [ 'pgilinux-20%(version_major)s-%(version_major)s%(version_minor)s-x86_64.tar.gz'] -gnu = 'GNU' -gnuver = '4.9.2-2.25' -versionsuffix = '-%s-%s' % (gnu, gnuver) +local_gnu = 'GNU' +local_gnuver = '4.9.2-2.25' +versionsuffix = '-%s-%s' % (local_gnu, local_gnuver) -dependencies = [(gnu, gnuver)] +dependencies = [(local_gnu, local_gnuver)] # license file import os diff --git a/p/PGI/PGI-15.7-GNU-4.9.3-2.25.eb b/p/PGI/PGI-15.7-GNU-4.9.3-2.25.eb index 3035c1ad..f130a634 100644 --- a/p/PGI/PGI-15.7-GNU-4.9.3-2.25.eb +++ b/p/PGI/PGI-15.7-GNU-4.9.3-2.25.eb @@ -9,11 +9,11 @@ toolchain = SYSTEM sources = [ 'pgilinux-20%(version_major)s-%(version_major)s%(version_minor)s-x86_64.tar.gz'] -gnu = 'GNU' -gnuver = '4.9.3-2.25' -versionsuffix = '-%s-%s' % (gnu, gnuver) +local_gnu = 'GNU' +local_gnuver = '4.9.3-2.25' +versionsuffix = '-%s-%s' % (local_gnu, local_gnuver) -dependencies = [(gnu, gnuver)] +dependencies = [(local_gnu, local_gnuver)] # license file import os diff --git a/p/PGI/PGI-16.10-GNU-4.9.3-2.25.eb b/p/PGI/PGI-16.10-GNU-4.9.3-2.25.eb index 865d3540..61540b14 100644 --- a/p/PGI/PGI-16.10-GNU-4.9.3-2.25.eb +++ b/p/PGI/PGI-16.10-GNU-4.9.3-2.25.eb @@ -9,11 +9,11 @@ toolchain = SYSTEM sources = [ 'pgicdk-Release20%(version_major)s-%(version_major)s%(version_minor)s.tar.gz'] -gnu = 'GNU' -gnuver = '4.9.3-2.25' -versionsuffix = '-%s-%s' % (gnu, gnuver) +local_gnu = 'GNU' +local_gnuver = '4.9.3-2.25' +versionsuffix = '-%s-%s' % (local_gnu, local_gnuver) -dependencies = [(gnu, gnuver)] +dependencies = [(local_gnu, local_gnuver)] # license file #import os diff --git a/p/PRINSEQ/PRINSEQ-0.20.4-goolf-1.4.10-Perl-5.16.3.eb b/p/PRINSEQ/PRINSEQ-0.20.4-goolf-1.4.10-Perl-5.16.3.eb index 93b5c022..998411d9 100644 --- a/p/PRINSEQ/PRINSEQ-0.20.4-goolf-1.4.10-Perl-5.16.3.eb +++ b/p/PRINSEQ/PRINSEQ-0.20.4-goolf-1.4.10-Perl-5.16.3.eb @@ -16,15 +16,15 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['http://sourceforge.net/projects/prinseq/files/standalone/'] sources = ['%(namelower)s-lite-%(version)s.tar.gz'] -perl = 'Perl' -perlver = '5.16.3' -versionsuffix = '-%s-%s' % (perl, perlver) +local_perl = 'Perl' +local_perlver = '5.16.3' +versionsuffix = '-%s-%s' % (local_perl, local_perlver) dependencies = [ - (perl, perlver), + (local_perl, local_perlver), ] -# these are the perl libraries dependencies +# these are the local_perl libraries dependencies exts_defaultclass = 'PerlModule' exts_filter = ("perldoc -lm %(ext_name)s ", "") @@ -97,16 +97,16 @@ exts_list = [ # this is the script which relies in many extra Perl libraries so we # verify it's working fine -sanity_check_commands = [('perl', '%(installdir)s/prinseq-graphs.pl')] +sanity_check_commands = [('local_perl', '%(installdir)s/prinseq-graphs.pl')] modextrapaths = { 'PATH': "", # add installation dir to PATH - 'PERL5LIB': 'lib/perl5/site_perl/%s/' % (perlver) + 'PERL5LIB': 'lib/perl5/site_perl/%s/' % (local_perlver) } postinstallcmds = [ # fix shebang line - "sed -i -e 's|/usr/bin/perl|/usr/bin/env\ perl|' %(installdir)s/*.pl", + "sed -i -e 's|/usr/bin/local_perl|/usr/bin/env\ local_perl|' %(installdir)s/*.pl", "chmod +x %(installdir)s/*.pl" # add execution permission ] diff --git a/p/PSI/PSI-4.0b4-ictce-5.3.0-mt.eb b/p/PSI/PSI-4.0b4-ictce-5.3.0-mt.eb index 382333cc..30c3fce8 100644 --- a/p/PSI/PSI-4.0b4-ictce-5.3.0-mt.eb +++ b/p/PSI/PSI-4.0b4-ictce-5.3.0-mt.eb @@ -17,17 +17,17 @@ sources = ['%(namelower)s%(version)s.tar.gz'] patches = [ 'PSI-4.0b4-mpi.patch', 'PSI-4.0b4-thread-pool.patch', - # workaround for broken python-config due to full path to bin/python being + # workaround for broken local_python-config due to full path to bin/local_python being # used 'PSI-%(version)s_python-config.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' dependencies = [ - (python, local_pyver), - ('Boost', '1.53.0', '-%s-%s' % (python, local_pyver)), + (local_python, local_pyver), + ('Boost', '1.53.0', '-%s-%s' % (local_python, local_pyver)), ] moduleclass = 'chem' diff --git a/p/PSI/PSI-4.0b4-ictce-5.3.0.eb b/p/PSI/PSI-4.0b4-ictce-5.3.0.eb index 7ef22dea..d44ccda5 100644 --- a/p/PSI/PSI-4.0b4-ictce-5.3.0.eb +++ b/p/PSI/PSI-4.0b4-ictce-5.3.0.eb @@ -15,17 +15,17 @@ sources = ['%(namelower)s%(version)s.tar.gz'] patches = [ 'PSI-4.0b4-mpi.patch', 'PSI-4.0b4-thread-pool.patch', - # workaround for broken python-config due to full path to bin/python being + # workaround for broken local_python-config due to full path to bin/local_python being # used 'PSI-%(version)s_python-config.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' dependencies = [ - (python, local_pyver), - ('Boost', '1.53.0', '-%s-%s' % (python, local_pyver)), + (local_python, local_pyver), + ('Boost', '1.53.0', '-%s-%s' % (local_python, local_pyver)), ] moduleclass = 'chem' diff --git a/p/PSI/PSI-4.0b5-ictce-5.3.0-mt.eb b/p/PSI/PSI-4.0b5-ictce-5.3.0-mt.eb index 2bdfd0d5..6f5027c9 100644 --- a/p/PSI/PSI-4.0b5-ictce-5.3.0-mt.eb +++ b/p/PSI/PSI-4.0b5-ictce-5.3.0-mt.eb @@ -18,17 +18,17 @@ patches = [ 'PSI-4.0b5-failed-test.patch', # the test works but it segfaults on exit 'PSI-4.0b5-thread-pool.patch', 'PSI-4.0b5-new-plugin.patch', - # workaround for broken python-config due to full path to bin/python being + # workaround for broken local_python-config due to full path to bin/local_python being # used 'PSI-%(version)s_python-config.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.5' dependencies = [ - (python, local_pyver), - ('Boost', '1.53.0', '-%s-%s' % (python, local_pyver)), + (local_python, local_pyver), + ('Boost', '1.53.0', '-%s-%s' % (local_python, local_pyver)), ] moduleclass = 'chem' diff --git a/p/PSI/PSI-4.0b5-ictce-5.3.0.eb b/p/PSI/PSI-4.0b5-ictce-5.3.0.eb index 388dac22..19d1f916 100644 --- a/p/PSI/PSI-4.0b5-ictce-5.3.0.eb +++ b/p/PSI/PSI-4.0b5-ictce-5.3.0.eb @@ -17,17 +17,17 @@ patches = [ 'PSI-4.0b5-failed-test.patch', # the test works but it segfaults on exit 'PSI-4.0b5-thread-pool.patch', 'PSI-4.0b5-new-plugin.patch', - # workaround for broken python-config due to full path to bin/python being + # workaround for broken local_python-config due to full path to bin/local_python being # used 'PSI-%(version)s_python-config.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.5' dependencies = [ - (python, local_pyver), - ('Boost', '1.53.0', '-%s-%s' % (python, local_pyver)), + (local_python, local_pyver), + ('Boost', '1.53.0', '-%s-%s' % (local_python, local_pyver)), ] moduleclass = 'chem' diff --git a/p/PSI/PSI-4.0b5-ictce-5.5.0-mt.eb b/p/PSI/PSI-4.0b5-ictce-5.5.0-mt.eb index 9f13a69e..5efbf67b 100644 --- a/p/PSI/PSI-4.0b5-ictce-5.5.0-mt.eb +++ b/p/PSI/PSI-4.0b5-ictce-5.5.0-mt.eb @@ -18,17 +18,17 @@ patches = [ 'PSI-4.0b5-failed-test.patch', # the test works but it segfaults on exit 'PSI-4.0b5-thread-pool.patch', 'PSI-4.0b5-new-plugin.patch', - # workaround for broken python-config due to full path to bin/python being + # workaround for broken local_python-config due to full path to bin/local_python being # used 'PSI-%(version)s_python-config.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.5' dependencies = [ - (python, local_pyver), - ('Boost', '1.53.0', '-%s-%s' % (python, local_pyver)), + (local_python, local_pyver), + ('Boost', '1.53.0', '-%s-%s' % (local_python, local_pyver)), ] moduleclass = 'chem' diff --git a/p/PSI/PSI-4.0b5-ictce-5.5.0.eb b/p/PSI/PSI-4.0b5-ictce-5.5.0.eb index fba245d0..3b16e4b7 100644 --- a/p/PSI/PSI-4.0b5-ictce-5.5.0.eb +++ b/p/PSI/PSI-4.0b5-ictce-5.5.0.eb @@ -17,17 +17,17 @@ patches = [ 'PSI-4.0b5-failed-test.patch', # the test works but it segfaults on exit 'PSI-4.0b5-thread-pool.patch', 'PSI-4.0b5-new-plugin.patch', - # workaround for broken python-config due to full path to bin/python being + # workaround for broken local_python-config due to full path to bin/local_python being # used 'PSI-%(version)s_python-config.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.5' dependencies = [ - (python, local_pyver), - ('Boost', '1.53.0', '-%s-%s' % (python, local_pyver)), + (local_python, local_pyver), + ('Boost', '1.53.0', '-%s-%s' % (local_python, local_pyver)), ] moduleclass = 'chem' diff --git a/p/Pango/Pango-1.39.0.eb b/p/Pango/Pango-1.39.0.eb index bebcc229..eb30d042 100644 --- a/p/Pango/Pango-1.39.0.eb +++ b/p/Pango/Pango-1.39.0.eb @@ -13,9 +13,9 @@ toolchain = SYSTEM source_urls = [FTPGNOME_SOURCE] sources = [SOURCELOWER_TAR_XZ] -glibver = '2.52.0' +local_glibver = '2.52.0' dependencies = [ - ('GLib', glibver), + ('GLib', local_glibver), ('cairo', '1.14.6'), ('HarfBuzz', '1.1.3'), ('GObject-Introspection', '1.47.1'), diff --git a/p/ParaView/ParaView-4.4.0-gimkl-2.11.5-mpi.eb b/p/ParaView/ParaView-4.4.0-gimkl-2.11.5-mpi.eb index 95439335..7c0e2cc5 100644 --- a/p/ParaView/ParaView-4.4.0-gimkl-2.11.5-mpi.eb +++ b/p/ParaView/ParaView-4.4.0-gimkl-2.11.5-mpi.eb @@ -10,17 +10,17 @@ description = "ParaView is a scientific parallel visualizer." toolchain = {'name': 'gimkl', 'version': '2.11.5'} toolchainopts = {'pic': True, 'usempi': True} -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-v%(version)s-source.tar.gz"] patches = ['%(name)s-%(version)s_missingheader.patch'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.10' -pylocal_suff = '-%s-%s' % (python, local_pyver) +local_pylocal_suff = '-%s-%s' % (local_python, local_pyver) dependencies = [ ('Mesa', '11.1.2'), ('libGLU', '9.0.0'), diff --git a/p/Paraview/Paraview-5.0.0-binary.eb b/p/Paraview/Paraview-5.0.0-binary.eb index feae61ce..ab33f775 100644 --- a/p/Paraview/Paraview-5.0.0-binary.eb +++ b/p/Paraview/Paraview-5.0.0-binary.eb @@ -9,10 +9,10 @@ description = "ParaView is a scientific parallel visualizer." toolchain = SYSTEM -download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' +local_download_local_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile=' source_urls = [ 'http://www.paraview.org/paraview-downloads/%s' % - download_local_suffix] + local_download_local_suffix] sources = ["ParaView-5.0.0-Qt4-OpenGL2-MPI-Linux-64bit.tar.gz"] install_cmd = "cp -a ParaView-5.0.0-Qt4-OpenGL2-MPI-Linux-64bit/* %(installdir)s/ && find %(installdir)s/ -type d -exec chmod 755 {} \; " diff --git a/p/phono3py/phono3py-0.9.14-Python-3.5.2-ictce-7.3.5.eb b/p/phono3py/phono3py-0.9.14-Python-3.5.2-ictce-7.3.5.eb index f1eda5b9..210059b0 100644 --- a/p/phono3py/phono3py-0.9.14-Python-3.5.2-ictce-7.3.5.eb +++ b/p/phono3py/phono3py-0.9.14-Python-3.5.2-ictce-7.3.5.eb @@ -13,20 +13,20 @@ source_urls = ['http://sourceforge.net/projects/phonopy/files/phono3py/'] patches = ['phono3py-0.9.14-mkl.patch'] # notice the hash hack to override setup.py -prebuildopts = 'python setup3.py build #' +prebuildopts = 'local_python setup3.py build #' # another hack -preinstallopts = 'python setup3.py install --prefix=%(installdir)s #' +preinstallopts = 'local_python setup3.py install --prefix=%(installdir)s #' skipsteps = ['test'] options = {'modulename': 'phonopy'} -python = "Python" -pythonversion = '3.5.2' -pythonshortversion = ".".join(pythonversion.split(".")[:-1]) +local_python = "Python" +local_pythonversion = '3.5.2' +local_pythonshortversion = ".".join(local_pythonversion.split(".")[:-1]) -versionsuffix = "-%s-%s" % (python, pythonversion) +versionsuffix = "-%s-%s" % (local_python, local_pythonversion) dependencies = [ - (python, pythonversion), + (local_python, local_pythonversion), ('LAPACKE', '3.5.0', '', ('LAPACK', '3.5.0')), ('h5py', '2.4.0', '-Python-2.7.9-serial') ] diff --git a/p/picard/picard-2.0.1-Java-1.8.0_66.eb b/p/picard/picard-2.0.1-Java-1.8.0_66.eb index 70094327..3422bc2c 100644 --- a/p/picard/picard-2.0.1-Java-1.8.0_66.eb +++ b/p/picard/picard-2.0.1-Java-1.8.0_66.eb @@ -11,11 +11,11 @@ source_urls = [ 'https://github.com/broadinstitute/picard/releases/download/%(version)s/'] sources = ['%(name)s-tools-%(version)s.zip'] -java = 'Java' -javaver = '1.8.0_66' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.8.0_66' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = "To execute picard run: java -jar \\${EBROOTPICARD}/%(name)s.jar" +modloadmsg = "To execute picard run: local_java -jar \\${EBROOTPICARD}/%(name)s.jar" moduleclass = 'bio' diff --git a/p/picard/picard-2.1.0-Java-1.8.0_74.eb b/p/picard/picard-2.1.0-Java-1.8.0_74.eb index 08ab091d..806fba17 100644 --- a/p/picard/picard-2.1.0-Java-1.8.0_74.eb +++ b/p/picard/picard-2.1.0-Java-1.8.0_74.eb @@ -11,11 +11,11 @@ source_urls = [ 'https://github.com/broadinstitute/picard/releases/download/%(version)s/'] sources = ['%(name)s-tools-%(version)s.zip'] -java = 'Java' -javaver = '1.8.0_74' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.8.0_74' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = "To execute picard run: java -jar \\${EBROOTPICARD}/%(name)s.jar" +modloadmsg = "To execute picard run: local_java -jar \\${EBROOTPICARD}/%(name)s.jar" moduleclass = 'bio' diff --git a/r/R/R-2.15.2-goolf-1.4.10.eb b/r/R/R-2.15.2-goolf-1.4.10.eb index 0ce1d655..9677914e 100644 --- a/r/R/R-2.15.2-goolf-1.4.10.eb +++ b/r/R/R-2.15.2-goolf-1.4.10.eb @@ -55,22 +55,22 @@ sanity_check_paths = { SHLIB_EXT], 'dirs': []} -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.11/bioc/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # !! order of packages is important !! exts_list = [ @@ -87,83 +87,83 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.5-9', ext_options), - ('irace', '1.03', ext_options), - ('rJava', '0.9-4', ext_options), - ('lattice', '0.20-15', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-24', ext_options), - ('Matrix', '1.0-12', ext_options), - ('png', '0.1-4', ext_options), - ('Rcpp', '0.10.3', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2013.4-1', ext_options), - ('MASS', '7.3-22', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('class', '7.3-5', ext_options), - ('e1071', '1.6-1', ext_options), - ('nnet', '7.3-6', ext_options), - ('car', '2.0-16', ext_options), - ('colorspace', '1.2-2', ext_options), - ('robustbase', '0.9-7', ext_options), - ('sp', '0.9-91', ext_options), - ('vcd', '1.2-13', ext_options), - ('Rserve', '0.6-1', ext_options), - ('DBI', '0.2-6', ext_options), - ('RSQLite', '0.11.3', ext_options), - ('hwriter', '1.3', ext_options), - ('bitops', '1.0-5', ext_options), - ('BiocGenerics', '0.4.0', bioconductor_options), - ('Biobase', '2.18.0', bioconductor_options), - ('IRanges', '1.16.6', bioconductor_options), - ('AnnotationDbi', '1.20.7', bioconductor_options), - ('Biostrings', '2.26.3', bioconductor_options), - ('GenomicRanges', '1.10.7', bioconductor_options), - ('BSgenome', '1.26.1', bioconductor_options), - ('zlibbioc', '1.4.0', bioconductor_options), - ('Rsamtools', '1.10.2', bioconductor_options), - ('ShortRead', '1.16.4', bioconductor_options), - ('akima', '0.5-9', ext_options), - ('boot', '1.3-7', ext_options), - ('cluster', '1.14.4', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('foreign', '0.8-53', ext_options), - ('gam', '1.08', ext_options), - ('nlme', '3.1-105', ext_options), - ('survival', '2.37-4', ext_options), - ('gamlss.data', '4.2-0', ext_options), - ('gamlss.dist', '4.2-0', ext_options), - ('gamlss', '4.2-0', ext_options), - ('gamlss.tr', '4.1-0', ext_options), - ('KernSmooth', '2.23-10', ext_options), - ('zoo', '1.7-9', ext_options), - ('lmtest', '0.9-31', ext_options), - ('mgcv', '1.7-22', ext_options), - ('mnormt', '1.4-5', ext_options), - ('mvtnorm', '0.9-9994', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('rpart', '4.1-1', ext_options), - ('sandwich', '2.2-10', ext_options), - ('sfsmisc', '1.0-23', ext_options), - ('spatial', '7.3-5', ext_options), - ('VGAM', '0.9-1', ext_options), - ('waveslim', '1.7.1', ext_options), - ('xtable', '1.7-0', ext_options), - ('profileModel', '0.5-8', ext_options), - ('brglm', '0.5-7', ext_options), - ('deSolve', '1.10-6', ext_options), - ('odesolve', '0.9-9', ext_options), - ('tseriesChaos', '0.1-11', ext_options), - ('tseries', '0.10-31', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.1-16', ext_options), - ('R.methodsS3', '1.4.2', ext_options), - ('R.oo', '1.13.0', ext_options), - ('R.matlab', '1.7.0', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('gbm', '2.1', ext_options), + ('Rmpi', '0.5-9', local_ext_options), + ('irace', '1.03', local_ext_options), + ('rJava', '0.9-4', local_ext_options), + ('lattice', '0.20-15', local_ext_options), + ('RColorBrewer', '1.0-5', local_ext_options), + ('latticeExtra', '0.6-24', local_ext_options), + ('Matrix', '1.0-12', local_ext_options), + ('png', '0.1-4', local_ext_options), + ('Rcpp', '0.10.3', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2013.4-1', local_ext_options), + ('MASS', '7.3-22', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('class', '7.3-5', local_ext_options), + ('e1071', '1.6-1', local_ext_options), + ('nnet', '7.3-6', local_ext_options), + ('car', '2.0-16', local_ext_options), + ('colorspace', '1.2-2', local_ext_options), + ('robustbase', '0.9-7', local_ext_options), + ('sp', '0.9-91', local_ext_options), + ('vcd', '1.2-13', local_ext_options), + ('Rserve', '0.6-1', local_ext_options), + ('DBI', '0.2-6', local_ext_options), + ('RSQLite', '0.11.3', local_ext_options), + ('hwriter', '1.3', local_ext_options), + ('bitops', '1.0-5', local_ext_options), + ('BiocGenerics', '0.4.0', local_bioconductor_options), + ('Biobase', '2.18.0', local_bioconductor_options), + ('IRanges', '1.16.6', local_bioconductor_options), + ('AnnotationDbi', '1.20.7', local_bioconductor_options), + ('Biostrings', '2.26.3', local_bioconductor_options), + ('GenomicRanges', '1.10.7', local_bioconductor_options), + ('BSgenome', '1.26.1', local_bioconductor_options), + ('zlibbioc', '1.4.0', local_bioconductor_options), + ('Rsamtools', '1.10.2', local_bioconductor_options), + ('ShortRead', '1.16.4', local_bioconductor_options), + ('akima', '0.5-9', local_ext_options), + ('boot', '1.3-7', local_ext_options), + ('cluster', '1.14.4', local_ext_options), + ('coda', '0.16-1', local_ext_options), + ('codetools', '0.2-8', local_ext_options), + ('foreign', '0.8-53', local_ext_options), + ('gam', '1.08', local_ext_options), + ('nlme', '3.1-105', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('gamlss.data', '4.2-0', local_ext_options), + ('gamlss.dist', '4.2-0', local_ext_options), + ('gamlss', '4.2-0', local_ext_options), + ('gamlss.tr', '4.1-0', local_ext_options), + ('KernSmooth', '2.23-10', local_ext_options), + ('zoo', '1.7-9', local_ext_options), + ('lmtest', '0.9-31', local_ext_options), + ('mgcv', '1.7-22', local_ext_options), + ('mnormt', '1.4-5', local_ext_options), + ('mvtnorm', '0.9-9994', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('pscl', '1.04.4', local_ext_options), + ('rpart', '4.1-1', local_ext_options), + ('sandwich', '2.2-10', local_ext_options), + ('sfsmisc', '1.0-23', local_ext_options), + ('spatial', '7.3-5', local_ext_options), + ('VGAM', '0.9-1', local_ext_options), + ('waveslim', '1.7.1', local_ext_options), + ('xtable', '1.7-0', local_ext_options), + ('profileModel', '0.5-8', local_ext_options), + ('brglm', '0.5-7', local_ext_options), + ('deSolve', '1.10-6', local_ext_options), + ('odesolve', '0.9-9', local_ext_options), + ('tseriesChaos', '0.1-11', local_ext_options), + ('tseries', '0.10-31', local_ext_options), + ('neuRosim', '0.2-10', local_ext_options), + ('fastICA', '1.1-16', local_ext_options), + ('R.methodsS3', '1.4.2', local_ext_options), + ('R.oo', '1.13.0', local_ext_options), + ('R.matlab', '1.7.0', local_ext_options), + ('Rniftilib', '0.0-32', local_ext_options), + ('gbm', '2.1', local_ext_options), ] moduleclass = 'lang' diff --git a/r/R/R-2.15.2-ictce-5.3.0.eb b/r/R/R-2.15.2-ictce-5.3.0.eb index 7d2e1e0c..6e83801f 100644 --- a/r/R/R-2.15.2-ictce-5.3.0.eb +++ b/r/R/R-2.15.2-ictce-5.3.0.eb @@ -55,22 +55,22 @@ sanity_check_paths = { SHLIB_EXT], 'dirs': []} -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.11/bioc/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # !! order of packages is important !! exts_list = [ @@ -87,83 +87,83 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.5-9', ext_options), - ('irace', '1.03', ext_options), - ('rJava', '0.9-4', ext_options), - ('lattice', '0.20-15', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-24', ext_options), - ('Matrix', '1.0-12', ext_options), - ('png', '0.1-4', ext_options), - ('Rcpp', '0.10.3', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2013.4-1', ext_options), - ('MASS', '7.3-22', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('class', '7.3-5', ext_options), - ('e1071', '1.6-1', ext_options), - ('nnet', '7.3-6', ext_options), - ('car', '2.0-16', ext_options), - ('colorspace', '1.2-2', ext_options), - ('robustbase', '0.9-7', ext_options), - ('sp', '0.9-91', ext_options), - ('vcd', '1.2-13', ext_options), - ('Rserve', '0.6-1', ext_options), - ('DBI', '0.2-6', ext_options), - ('RSQLite', '0.11.3', ext_options), - ('hwriter', '1.3', ext_options), - ('bitops', '1.0-5', ext_options), - ('BiocGenerics', '0.4.0', bioconductor_options), - ('Biobase', '2.18.0', bioconductor_options), - ('IRanges', '1.16.6', bioconductor_options), - ('AnnotationDbi', '1.20.7', bioconductor_options), - ('Biostrings', '2.26.3', bioconductor_options), - ('GenomicRanges', '1.10.7', bioconductor_options), - ('BSgenome', '1.26.1', bioconductor_options), - ('zlibbioc', '1.4.0', bioconductor_options), - ('Rsamtools', '1.10.2', bioconductor_options), - ('ShortRead', '1.16.4', bioconductor_options), - ('akima', '0.5-9', ext_options), - ('boot', '1.3-7', ext_options), - ('cluster', '1.14.4', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('foreign', '0.8-53', ext_options), - ('gam', '1.08', ext_options), - ('nlme', '3.1-105', ext_options), - ('survival', '2.37-4', ext_options), - ('gamlss.data', '4.2-0', ext_options), - ('gamlss.dist', '4.2-0', ext_options), - ('gamlss', '4.2-0', ext_options), - ('gamlss.tr', '4.1-0', ext_options), - ('KernSmooth', '2.23-10', ext_options), - ('zoo', '1.7-9', ext_options), - ('lmtest', '0.9-31', ext_options), - ('mgcv', '1.7-22', ext_options), - ('mnormt', '1.4-5', ext_options), - ('mvtnorm', '0.9-9994', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('rpart', '4.1-1', ext_options), - ('sandwich', '2.2-10', ext_options), - ('sfsmisc', '1.0-23', ext_options), - ('spatial', '7.3-5', ext_options), - ('VGAM', '0.9-1', ext_options), - ('waveslim', '1.7.1', ext_options), - ('xtable', '1.7-0', ext_options), - ('profileModel', '0.5-8', ext_options), - ('brglm', '0.5-7', ext_options), - ('deSolve', '1.10-6', ext_options), - ('odesolve', '0.9-9', ext_options), - ('tseriesChaos', '0.1-11', ext_options), - ('tseries', '0.10-31', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.1-16', ext_options), - ('R.methodsS3', '1.4.2', ext_options), - ('R.oo', '1.13.0', ext_options), - ('R.matlab', '1.7.0', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('gbm', '2.1', ext_options), + ('Rmpi', '0.5-9', local_ext_options), + ('irace', '1.03', local_ext_options), + ('rJava', '0.9-4', local_ext_options), + ('lattice', '0.20-15', local_ext_options), + ('RColorBrewer', '1.0-5', local_ext_options), + ('latticeExtra', '0.6-24', local_ext_options), + ('Matrix', '1.0-12', local_ext_options), + ('png', '0.1-4', local_ext_options), + ('Rcpp', '0.10.3', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2013.4-1', local_ext_options), + ('MASS', '7.3-22', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('class', '7.3-5', local_ext_options), + ('e1071', '1.6-1', local_ext_options), + ('nnet', '7.3-6', local_ext_options), + ('car', '2.0-16', local_ext_options), + ('colorspace', '1.2-2', local_ext_options), + ('robustbase', '0.9-7', local_ext_options), + ('sp', '0.9-91', local_ext_options), + ('vcd', '1.2-13', local_ext_options), + ('Rserve', '0.6-1', local_ext_options), + ('DBI', '0.2-6', local_ext_options), + ('RSQLite', '0.11.3', local_ext_options), + ('hwriter', '1.3', local_ext_options), + ('bitops', '1.0-5', local_ext_options), + ('BiocGenerics', '0.4.0', local_bioconductor_options), + ('Biobase', '2.18.0', local_bioconductor_options), + ('IRanges', '1.16.6', local_bioconductor_options), + ('AnnotationDbi', '1.20.7', local_bioconductor_options), + ('Biostrings', '2.26.3', local_bioconductor_options), + ('GenomicRanges', '1.10.7', local_bioconductor_options), + ('BSgenome', '1.26.1', local_bioconductor_options), + ('zlibbioc', '1.4.0', local_bioconductor_options), + ('Rsamtools', '1.10.2', local_bioconductor_options), + ('ShortRead', '1.16.4', local_bioconductor_options), + ('akima', '0.5-9', local_ext_options), + ('boot', '1.3-7', local_ext_options), + ('cluster', '1.14.4', local_ext_options), + ('coda', '0.16-1', local_ext_options), + ('codetools', '0.2-8', local_ext_options), + ('foreign', '0.8-53', local_ext_options), + ('gam', '1.08', local_ext_options), + ('nlme', '3.1-105', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('gamlss.data', '4.2-0', local_ext_options), + ('gamlss.dist', '4.2-0', local_ext_options), + ('gamlss', '4.2-0', local_ext_options), + ('gamlss.tr', '4.1-0', local_ext_options), + ('KernSmooth', '2.23-10', local_ext_options), + ('zoo', '1.7-9', local_ext_options), + ('lmtest', '0.9-31', local_ext_options), + ('mgcv', '1.7-22', local_ext_options), + ('mnormt', '1.4-5', local_ext_options), + ('mvtnorm', '0.9-9994', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('pscl', '1.04.4', local_ext_options), + ('rpart', '4.1-1', local_ext_options), + ('sandwich', '2.2-10', local_ext_options), + ('sfsmisc', '1.0-23', local_ext_options), + ('spatial', '7.3-5', local_ext_options), + ('VGAM', '0.9-1', local_ext_options), + ('waveslim', '1.7.1', local_ext_options), + ('xtable', '1.7-0', local_ext_options), + ('profileModel', '0.5-8', local_ext_options), + ('brglm', '0.5-7', local_ext_options), + ('deSolve', '1.10-6', local_ext_options), + ('odesolve', '0.9-9', local_ext_options), + ('tseriesChaos', '0.1-11', local_ext_options), + ('tseries', '0.10-31', local_ext_options), + ('neuRosim', '0.2-10', local_ext_options), + ('fastICA', '1.1-16', local_ext_options), + ('R.methodsS3', '1.4.2', local_ext_options), + ('R.oo', '1.13.0', local_ext_options), + ('R.matlab', '1.7.0', local_ext_options), + ('Rniftilib', '0.0-32', local_ext_options), + ('gbm', '2.1', local_ext_options), ] moduleclass = 'lang' diff --git a/r/R/R-2.15.3-goolf-1.4.10.eb b/r/R/R-2.15.3-goolf-1.4.10.eb index 87e0db47..763a2f0a 100644 --- a/r/R/R-2.15.3-goolf-1.4.10.eb +++ b/r/R/R-2.15.3-goolf-1.4.10.eb @@ -55,22 +55,22 @@ sanity_check_paths = { SHLIB_EXT], 'dirs': []} -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.12/bioc/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # !! order of packages is important !! exts_list = [ @@ -87,88 +87,88 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.5-9', ext_options), - ('irace', '1.03', ext_options), - ('rJava', '0.9-4', ext_options), - ('lattice', '0.20-15', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-24', ext_options), - ('Matrix', '1.0-12', ext_options), - ('png', '0.1-4', ext_options), - ('Rcpp', '0.10.3', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2013.4-1', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('snow', '0.3-12', ext_options), - ('MASS', '7.3-23', ext_options), - ('class', '7.3-5', ext_options), - ('e1071', '1.6-1', ext_options), - ('nnet', '7.3-6', ext_options), - ('car', '2.0-17', ext_options), - ('colorspace', '1.2-2', ext_options), - ('robustbase', '0.9-7', ext_options), - ('sp', '0.9-91', ext_options), - ('vcd', '1.2-13', ext_options), - ('snowfall', '1.84-4', ext_options), - ('logistf', '1.10', ext_options), - ('Rserve', '0.6-1', ext_options), - ('akima', '0.5-10', ext_options), - ('bitops', '1.0-5', ext_options), - ('boot', '1.3-7', ext_options), - ('cluster', '1.14.4', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('DBI', '0.2-7', ext_options), - ('foreign', '0.8-54', ext_options), - ('nlme', '3.1-108', ext_options), - ('survival', '2.37-4', ext_options), - ('gam', '1.08', ext_options), - ('gamlss.data', '4.2-0', ext_options), - ('gamlss.dist', '4.2-0', ext_options), - ('gamlss', '4.2-0', ext_options), - ('gamlss.tr', '4.1-0', ext_options), - ('hwriter', '1.3', ext_options), - ('KernSmooth', '2.23-10', ext_options), - ('zoo', '1.7-9', ext_options), - ('lmtest', '0.9-31', ext_options), - ('mgcv', '1.7-23', ext_options), - ('mnormt', '1.4-5', ext_options), - ('mvtnorm', '0.9-9994', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('rpart', '4.1-1', ext_options), - ('RSQLite', '0.11.3', ext_options), - ('sandwich', '2.2-10', ext_options), - ('sfsmisc', '1.0-23', ext_options), - ('spatial', '7.3-5', ext_options), - ('VGAM', '0.9-1', ext_options), - ('waveslim', '1.7.1', ext_options), - ('xtable', '1.7-1', ext_options), - ('profileModel', '0.5-8', ext_options), - ('brglm', '0.5-7', ext_options), - ('deSolve', '1.10-6', ext_options), - ('odesolve', '0.9-9', ext_options), - ('tseriesChaos', '0.1-11', ext_options), - ('tseries', '0.10-32', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.1-16', ext_options), - ('R.methodsS3', '1.4.2', ext_options), - ('R.oo', '1.13.0', ext_options), - ('R.matlab', '1.7.0', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('BiocGenerics', '0.6.0', bioconductor_options), - ('Biobase', '2.20.0', bioconductor_options), - ('IRanges', '1.18.1', bioconductor_options), - ('AnnotationDbi', '1.22.5', bioconductor_options), - ('Biostrings', '2.28.0', bioconductor_options), - ('GenomicRanges', '1.12.4', bioconductor_options), - ('BSgenome', '1.28.0', bioconductor_options), - ('zlibbioc', '1.6.0', bioconductor_options), - ('Rsamtools', '1.12.3', bioconductor_options), - ('ShortRead', '1.18.0', bioconductor_options), - ('graph', '1.38.0', bioconductor_options), - ('igraph0', '0.5.7', ext_options), - ('gbm', '2.1', ext_options), + ('Rmpi', '0.5-9', local_ext_options), + ('irace', '1.03', local_ext_options), + ('rJava', '0.9-4', local_ext_options), + ('lattice', '0.20-15', local_ext_options), + ('RColorBrewer', '1.0-5', local_ext_options), + ('latticeExtra', '0.6-24', local_ext_options), + ('Matrix', '1.0-12', local_ext_options), + ('png', '0.1-4', local_ext_options), + ('Rcpp', '0.10.3', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2013.4-1', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('snow', '0.3-12', local_ext_options), + ('MASS', '7.3-23', local_ext_options), + ('class', '7.3-5', local_ext_options), + ('e1071', '1.6-1', local_ext_options), + ('nnet', '7.3-6', local_ext_options), + ('car', '2.0-17', local_ext_options), + ('colorspace', '1.2-2', local_ext_options), + ('robustbase', '0.9-7', local_ext_options), + ('sp', '0.9-91', local_ext_options), + ('vcd', '1.2-13', local_ext_options), + ('snowfall', '1.84-4', local_ext_options), + ('logistf', '1.10', local_ext_options), + ('Rserve', '0.6-1', local_ext_options), + ('akima', '0.5-10', local_ext_options), + ('bitops', '1.0-5', local_ext_options), + ('boot', '1.3-7', local_ext_options), + ('cluster', '1.14.4', local_ext_options), + ('coda', '0.16-1', local_ext_options), + ('codetools', '0.2-8', local_ext_options), + ('DBI', '0.2-7', local_ext_options), + ('foreign', '0.8-54', local_ext_options), + ('nlme', '3.1-108', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('gam', '1.08', local_ext_options), + ('gamlss.data', '4.2-0', local_ext_options), + ('gamlss.dist', '4.2-0', local_ext_options), + ('gamlss', '4.2-0', local_ext_options), + ('gamlss.tr', '4.1-0', local_ext_options), + ('hwriter', '1.3', local_ext_options), + ('KernSmooth', '2.23-10', local_ext_options), + ('zoo', '1.7-9', local_ext_options), + ('lmtest', '0.9-31', local_ext_options), + ('mgcv', '1.7-23', local_ext_options), + ('mnormt', '1.4-5', local_ext_options), + ('mvtnorm', '0.9-9994', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('pscl', '1.04.4', local_ext_options), + ('rpart', '4.1-1', local_ext_options), + ('RSQLite', '0.11.3', local_ext_options), + ('sandwich', '2.2-10', local_ext_options), + ('sfsmisc', '1.0-23', local_ext_options), + ('spatial', '7.3-5', local_ext_options), + ('VGAM', '0.9-1', local_ext_options), + ('waveslim', '1.7.1', local_ext_options), + ('xtable', '1.7-1', local_ext_options), + ('profileModel', '0.5-8', local_ext_options), + ('brglm', '0.5-7', local_ext_options), + ('deSolve', '1.10-6', local_ext_options), + ('odesolve', '0.9-9', local_ext_options), + ('tseriesChaos', '0.1-11', local_ext_options), + ('tseries', '0.10-32', local_ext_options), + ('neuRosim', '0.2-10', local_ext_options), + ('fastICA', '1.1-16', local_ext_options), + ('R.methodsS3', '1.4.2', local_ext_options), + ('R.oo', '1.13.0', local_ext_options), + ('R.matlab', '1.7.0', local_ext_options), + ('Rniftilib', '0.0-32', local_ext_options), + ('BiocGenerics', '0.6.0', local_bioconductor_options), + ('Biobase', '2.20.0', local_bioconductor_options), + ('IRanges', '1.18.1', local_bioconductor_options), + ('AnnotationDbi', '1.22.5', local_bioconductor_options), + ('Biostrings', '2.28.0', local_bioconductor_options), + ('GenomicRanges', '1.12.4', local_bioconductor_options), + ('BSgenome', '1.28.0', local_bioconductor_options), + ('zlibbioc', '1.6.0', local_bioconductor_options), + ('Rsamtools', '1.12.3', local_bioconductor_options), + ('ShortRead', '1.18.0', local_bioconductor_options), + ('graph', '1.38.0', local_bioconductor_options), + ('igraph0', '0.5.7', local_ext_options), + ('gbm', '2.1', local_ext_options), ] moduleclass = 'lang' diff --git a/r/R/R-2.15.3-ictce-5.3.0.eb b/r/R/R-2.15.3-ictce-5.3.0.eb index 89375480..85d60eca 100644 --- a/r/R/R-2.15.3-ictce-5.3.0.eb +++ b/r/R/R-2.15.3-ictce-5.3.0.eb @@ -55,22 +55,22 @@ sanity_check_paths = { SHLIB_EXT], 'dirs': []} -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.12/bioc/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # !! order of packages is important !! exts_list = [ @@ -87,88 +87,88 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('Rmpi', '0.5-9', ext_options), - ('irace', '1.03', ext_options), - ('rJava', '0.9-4', ext_options), - ('lattice', '0.20-15', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-24', ext_options), - ('Matrix', '1.0-12', ext_options), - ('png', '0.1-4', ext_options), - ('Rcpp', '0.10.3', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2013.4-1', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('snow', '0.3-12', ext_options), - ('MASS', '7.3-23', ext_options), - ('class', '7.3-5', ext_options), - ('e1071', '1.6-1', ext_options), - ('nnet', '7.3-6', ext_options), - ('car', '2.0-17', ext_options), - ('colorspace', '1.2-2', ext_options), - ('robustbase', '0.9-7', ext_options), - ('sp', '0.9-91', ext_options), - ('vcd', '1.2-13', ext_options), - ('snowfall', '1.84-4', ext_options), - ('logistf', '1.10', ext_options), - ('Rserve', '0.6-1', ext_options), - ('akima', '0.5-10', ext_options), - ('bitops', '1.0-5', ext_options), - ('boot', '1.3-7', ext_options), - ('cluster', '1.14.4', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('DBI', '0.2-7', ext_options), - ('foreign', '0.8-54', ext_options), - ('nlme', '3.1-108', ext_options), - ('survival', '2.37-4', ext_options), - ('gam', '1.08', ext_options), - ('gamlss.data', '4.2-0', ext_options), - ('gamlss.dist', '4.2-0', ext_options), - ('gamlss', '4.2-0', ext_options), - ('gamlss.tr', '4.1-0', ext_options), - ('hwriter', '1.3', ext_options), - ('KernSmooth', '2.23-10', ext_options), - ('zoo', '1.7-9', ext_options), - ('lmtest', '0.9-31', ext_options), - ('mgcv', '1.7-23', ext_options), - ('mnormt', '1.4-5', ext_options), - ('mvtnorm', '0.9-9994', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('rpart', '4.1-1', ext_options), - ('RSQLite', '0.11.3', ext_options), - ('sandwich', '2.2-10', ext_options), - ('sfsmisc', '1.0-23', ext_options), - ('spatial', '7.3-5', ext_options), - ('VGAM', '0.9-1', ext_options), - ('waveslim', '1.7.1', ext_options), - ('xtable', '1.7-1', ext_options), - ('profileModel', '0.5-8', ext_options), - ('brglm', '0.5-7', ext_options), - ('deSolve', '1.10-6', ext_options), - ('odesolve', '0.9-9', ext_options), - ('tseriesChaos', '0.1-11', ext_options), - ('tseries', '0.10-32', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.1-16', ext_options), - ('R.methodsS3', '1.4.2', ext_options), - ('R.oo', '1.13.0', ext_options), - ('R.matlab', '1.7.0', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('BiocGenerics', '0.6.0', bioconductor_options), - ('Biobase', '2.20.0', bioconductor_options), - ('IRanges', '1.18.1', bioconductor_options), - ('AnnotationDbi', '1.22.5', bioconductor_options), - ('Biostrings', '2.28.0', bioconductor_options), - ('GenomicRanges', '1.12.4', bioconductor_options), - ('BSgenome', '1.28.0', bioconductor_options), - ('zlibbioc', '1.6.0', bioconductor_options), - ('Rsamtools', '1.12.3', bioconductor_options), - ('ShortRead', '1.18.0', bioconductor_options), - ('graph', '1.38.0', bioconductor_options), - ('igraph0', '0.5.7', ext_options), - ('gbm', '2.1', ext_options), + ('Rmpi', '0.5-9', local_ext_options), + ('irace', '1.03', local_ext_options), + ('rJava', '0.9-4', local_ext_options), + ('lattice', '0.20-15', local_ext_options), + ('RColorBrewer', '1.0-5', local_ext_options), + ('latticeExtra', '0.6-24', local_ext_options), + ('Matrix', '1.0-12', local_ext_options), + ('png', '0.1-4', local_ext_options), + ('Rcpp', '0.10.3', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2013.4-1', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('snow', '0.3-12', local_ext_options), + ('MASS', '7.3-23', local_ext_options), + ('class', '7.3-5', local_ext_options), + ('e1071', '1.6-1', local_ext_options), + ('nnet', '7.3-6', local_ext_options), + ('car', '2.0-17', local_ext_options), + ('colorspace', '1.2-2', local_ext_options), + ('robustbase', '0.9-7', local_ext_options), + ('sp', '0.9-91', local_ext_options), + ('vcd', '1.2-13', local_ext_options), + ('snowfall', '1.84-4', local_ext_options), + ('logistf', '1.10', local_ext_options), + ('Rserve', '0.6-1', local_ext_options), + ('akima', '0.5-10', local_ext_options), + ('bitops', '1.0-5', local_ext_options), + ('boot', '1.3-7', local_ext_options), + ('cluster', '1.14.4', local_ext_options), + ('coda', '0.16-1', local_ext_options), + ('codetools', '0.2-8', local_ext_options), + ('DBI', '0.2-7', local_ext_options), + ('foreign', '0.8-54', local_ext_options), + ('nlme', '3.1-108', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('gam', '1.08', local_ext_options), + ('gamlss.data', '4.2-0', local_ext_options), + ('gamlss.dist', '4.2-0', local_ext_options), + ('gamlss', '4.2-0', local_ext_options), + ('gamlss.tr', '4.1-0', local_ext_options), + ('hwriter', '1.3', local_ext_options), + ('KernSmooth', '2.23-10', local_ext_options), + ('zoo', '1.7-9', local_ext_options), + ('lmtest', '0.9-31', local_ext_options), + ('mgcv', '1.7-23', local_ext_options), + ('mnormt', '1.4-5', local_ext_options), + ('mvtnorm', '0.9-9994', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('pscl', '1.04.4', local_ext_options), + ('rpart', '4.1-1', local_ext_options), + ('RSQLite', '0.11.3', local_ext_options), + ('sandwich', '2.2-10', local_ext_options), + ('sfsmisc', '1.0-23', local_ext_options), + ('spatial', '7.3-5', local_ext_options), + ('VGAM', '0.9-1', local_ext_options), + ('waveslim', '1.7.1', local_ext_options), + ('xtable', '1.7-1', local_ext_options), + ('profileModel', '0.5-8', local_ext_options), + ('brglm', '0.5-7', local_ext_options), + ('deSolve', '1.10-6', local_ext_options), + ('odesolve', '0.9-9', local_ext_options), + ('tseriesChaos', '0.1-11', local_ext_options), + ('tseries', '0.10-32', local_ext_options), + ('neuRosim', '0.2-10', local_ext_options), + ('fastICA', '1.1-16', local_ext_options), + ('R.methodsS3', '1.4.2', local_ext_options), + ('R.oo', '1.13.0', local_ext_options), + ('R.matlab', '1.7.0', local_ext_options), + ('Rniftilib', '0.0-32', local_ext_options), + ('BiocGenerics', '0.6.0', local_bioconductor_options), + ('Biobase', '2.20.0', local_bioconductor_options), + ('IRanges', '1.18.1', local_bioconductor_options), + ('AnnotationDbi', '1.22.5', local_bioconductor_options), + ('Biostrings', '2.28.0', local_bioconductor_options), + ('GenomicRanges', '1.12.4', local_bioconductor_options), + ('BSgenome', '1.28.0', local_bioconductor_options), + ('zlibbioc', '1.6.0', local_bioconductor_options), + ('Rsamtools', '1.12.3', local_bioconductor_options), + ('ShortRead', '1.18.0', local_bioconductor_options), + ('graph', '1.38.0', local_bioconductor_options), + ('igraph0', '0.5.7', local_ext_options), + ('gbm', '2.1', local_ext_options), ] moduleclass = 'lang' diff --git a/r/R/R-3.0.2-goolf-1.4.10.eb b/r/R/R-3.0.2-goolf-1.4.10.eb index 25b3d181..4d494330 100644 --- a/r/R/R-3.0.2-goolf-1.4.10.eb +++ b/r/R/R-3.0.2-goolf-1.4.10.eb @@ -55,28 +55,28 @@ sanity_check_paths = { SHLIB_EXT], 'dirs': []} -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.13/bioc/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # some packages seem to only be in rforge, not in cran -rforge_options = { +local_rforge_options = { 'source_urls': ['http://download.r-forge.r-project.org/src/contrib/'], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } @@ -95,106 +95,106 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('irace', '1.04', ext_options), - ('rJava', '0.9-4', ext_options), - ('lattice', '0.20-24', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-26', ext_options), - ('Matrix', '1.1-0', ext_options), - ('png', '0.1-6', ext_options), - ('Rcpp', '0.10.6', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2013.4-1', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('snow', '0.3-13', ext_options), - ('MASS', '7.3-29', ext_options), - ('class', '7.3-9', ext_options), - ('e1071', '1.6-1', ext_options), - ('nnet', '7.3-7', ext_options), - ('car', '2.0-19', ext_options), - ('colorspace', '1.2-4', ext_options), - ('robustbase', '0.9-10', ext_options), - ('sp', '1.0-14', ext_options), - ('vcd', '1.3-1', ext_options), - ('snowfall', '1.84-4', ext_options), - ('rpart', '4.1-3', ext_options), - ('mice', '2.18', ext_options), - ('nlme', '3.1-111', ext_options), - ('mgcv', '1.7-27', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-11', ext_options), - ('bitops', '1.0-6', ext_options), - ('boot', '1.3-9', ext_options), - ('cluster', '1.14.4', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('DBI', '0.2-7', ext_options), - ('foreign', '0.8-57', ext_options), - ('survival', '2.37-4', ext_options), - ('gam', '1.09', ext_options), - ('gamlss.data', '4.2-6', ext_options), - ('gamlss.dist', '4.2-0', ext_options), - ('hwriter', '1.3', ext_options), - ('KernSmooth', '2.23-10', ext_options), - ('zoo', '1.7-10', ext_options), - ('lmtest', '0.9-32', ext_options), - ('mnormt', '1.4-5', ext_options), - ('mvtnorm', '0.9-9996', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('RSQLite', '0.11.4', ext_options), - ('sandwich', '2.3-0', ext_options), - ('sfsmisc', '1.0-24', ext_options), - ('spatial', '7.3-7', ext_options), - ('VGAM', '0.9-3', ext_options), - ('waveslim', '1.7.1', ext_options), - ('xtable', '1.7-1', ext_options), - ('profileModel', '0.5-9', ext_options), - ('brglm', '0.5-9', ext_options), - ('deSolve', '1.10-8', ext_options), - ('odesolve', '0.9-9', ext_options), - ('tseriesChaos', '0.1-13', ext_options), - ('tseries', '0.10-32', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.2-0', ext_options), - ('R.methodsS3', '1.5.2', ext_options), - ('R.oo', '1.15.8', ext_options), - ('R.matlab', '2.0.5', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('BiocGenerics', '0.8.0', bioconductor_options), - ('Biobase', '2.22.0', bioconductor_options), - ('IRanges', '1.20.5', bioconductor_options), - ('AnnotationDbi', '1.24.0', bioconductor_options), - ('XVector', '0.2.0', bioconductor_options), - ('Biostrings', '2.30.0', bioconductor_options), - ('GenomicRanges', '1.14.3', bioconductor_options), - ('BSgenome', '1.30.0', bioconductor_options), - ('zlibbioc', '1.8.0', bioconductor_options), - ('Rsamtools', '1.14.1', bioconductor_options), - ('ShortRead', '1.20.0', bioconductor_options), - ('graph', '1.40.0', bioconductor_options), - ('igraph0', '0.5.7', ext_options), - ('gbm', '2.1', ext_options), - ('plyr', '1.8', ext_options), - ('dichromat', '2.0-0', ext_options), - ('Formula', '1.1-1', ext_options), - ('Hmisc', '3.13-0', ext_options), - ('stringr', '0.6.2', ext_options), - ('munsell', '0.4.2', ext_options), - ('labeling', '0.2', ext_options), - ('scales', '0.2.3', ext_options), - ('fastcluster', '1.1.11', ext_options), - ('reshape2', '1.2.2', ext_options), - ('digest', '0.6.3', ext_options), - ('gtable', '0.1.2', ext_options), - ('proto', '0.3-10', ext_options), - ('ggplot2', '0.9.3.1', ext_options), - ('leaps', '2.9', ext_options), - ('survival', '2.37-4', ext_options), - ('speff2trial', '1.0.4', ext_options), - ('nleqslv', '2.1', ext_options), - ('glmnet', '1.9-5', ext_options), - ('pim', '1.1.5.4', rforge_options), + ('irace', '1.04', local_ext_options), + ('rJava', '0.9-4', local_ext_options), + ('lattice', '0.20-24', local_ext_options), + ('RColorBrewer', '1.0-5', local_ext_options), + ('latticeExtra', '0.6-26', local_ext_options), + ('Matrix', '1.1-0', local_ext_options), + ('png', '0.1-6', local_ext_options), + ('Rcpp', '0.10.6', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2013.4-1', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('snow', '0.3-13', local_ext_options), + ('MASS', '7.3-29', local_ext_options), + ('class', '7.3-9', local_ext_options), + ('e1071', '1.6-1', local_ext_options), + ('nnet', '7.3-7', local_ext_options), + ('car', '2.0-19', local_ext_options), + ('colorspace', '1.2-4', local_ext_options), + ('robustbase', '0.9-10', local_ext_options), + ('sp', '1.0-14', local_ext_options), + ('vcd', '1.3-1', local_ext_options), + ('snowfall', '1.84-4', local_ext_options), + ('rpart', '4.1-3', local_ext_options), + ('mice', '2.18', local_ext_options), + ('nlme', '3.1-111', local_ext_options), + ('mgcv', '1.7-27', local_ext_options), + ('logistf', '1.21', local_ext_options), + ('akima', '0.5-11', local_ext_options), + ('bitops', '1.0-6', local_ext_options), + ('boot', '1.3-9', local_ext_options), + ('cluster', '1.14.4', local_ext_options), + ('coda', '0.16-1', local_ext_options), + ('codetools', '0.2-8', local_ext_options), + ('DBI', '0.2-7', local_ext_options), + ('foreign', '0.8-57', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('gam', '1.09', local_ext_options), + ('gamlss.data', '4.2-6', local_ext_options), + ('gamlss.dist', '4.2-0', local_ext_options), + ('hwriter', '1.3', local_ext_options), + ('KernSmooth', '2.23-10', local_ext_options), + ('zoo', '1.7-10', local_ext_options), + ('lmtest', '0.9-32', local_ext_options), + ('mnormt', '1.4-5', local_ext_options), + ('mvtnorm', '0.9-9996', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('pscl', '1.04.4', local_ext_options), + ('RSQLite', '0.11.4', local_ext_options), + ('sandwich', '2.3-0', local_ext_options), + ('sfsmisc', '1.0-24', local_ext_options), + ('spatial', '7.3-7', local_ext_options), + ('VGAM', '0.9-3', local_ext_options), + ('waveslim', '1.7.1', local_ext_options), + ('xtable', '1.7-1', local_ext_options), + ('profileModel', '0.5-9', local_ext_options), + ('brglm', '0.5-9', local_ext_options), + ('deSolve', '1.10-8', local_ext_options), + ('odesolve', '0.9-9', local_ext_options), + ('tseriesChaos', '0.1-13', local_ext_options), + ('tseries', '0.10-32', local_ext_options), + ('neuRosim', '0.2-10', local_ext_options), + ('fastICA', '1.2-0', local_ext_options), + ('R.methodsS3', '1.5.2', local_ext_options), + ('R.oo', '1.15.8', local_ext_options), + ('R.matlab', '2.0.5', local_ext_options), + ('Rniftilib', '0.0-32', local_ext_options), + ('BiocGenerics', '0.8.0', local_bioconductor_options), + ('Biobase', '2.22.0', local_bioconductor_options), + ('IRanges', '1.20.5', local_bioconductor_options), + ('AnnotationDbi', '1.24.0', local_bioconductor_options), + ('XVector', '0.2.0', local_bioconductor_options), + ('Biostrings', '2.30.0', local_bioconductor_options), + ('GenomicRanges', '1.14.3', local_bioconductor_options), + ('BSgenome', '1.30.0', local_bioconductor_options), + ('zlibbioc', '1.8.0', local_bioconductor_options), + ('Rsamtools', '1.14.1', local_bioconductor_options), + ('ShortRead', '1.20.0', local_bioconductor_options), + ('graph', '1.40.0', local_bioconductor_options), + ('igraph0', '0.5.7', local_ext_options), + ('gbm', '2.1', local_ext_options), + ('plyr', '1.8', local_ext_options), + ('dichromat', '2.0-0', local_ext_options), + ('Formula', '1.1-1', local_ext_options), + ('Hmisc', '3.13-0', local_ext_options), + ('stringr', '0.6.2', local_ext_options), + ('munsell', '0.4.2', local_ext_options), + ('labeling', '0.2', local_ext_options), + ('scales', '0.2.3', local_ext_options), + ('fastcluster', '1.1.11', local_ext_options), + ('reshape2', '1.2.2', local_ext_options), + ('digest', '0.6.3', local_ext_options), + ('gtable', '0.1.2', local_ext_options), + ('proto', '0.3-10', local_ext_options), + ('ggplot2', '0.9.3.1', local_ext_options), + ('leaps', '2.9', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('speff2trial', '1.0.4', local_ext_options), + ('nleqslv', '2.1', local_ext_options), + ('glmnet', '1.9-5', local_ext_options), + ('pim', '1.1.5.4', local_rforge_options), ] moduleclass = 'lang' diff --git a/r/R/R-3.0.2-ictce-5.3.0.eb b/r/R/R-3.0.2-ictce-5.3.0.eb index a1072329..80f76d84 100644 --- a/r/R/R-3.0.2-ictce-5.3.0.eb +++ b/r/R/R-3.0.2-ictce-5.3.0.eb @@ -55,28 +55,28 @@ sanity_check_paths = { SHLIB_EXT], 'dirs': []} -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.13/bioc/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # some packages seem to only be in rforge, not in cran -rforge_options = { +local_rforge_options = { 'source_urls': ['http://download.r-forge.r-project.org/src/contrib/'], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # !! order of packages is important !! @@ -94,106 +94,106 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('irace', '1.04', ext_options), - ('rJava', '0.9-4', ext_options), - ('lattice', '0.20-24', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-26', ext_options), - ('Matrix', '1.1-0', ext_options), - ('png', '0.1-6', ext_options), - ('Rcpp', '0.10.6', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2013.4-1', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('snow', '0.3-13', ext_options), - ('MASS', '7.3-29', ext_options), - ('class', '7.3-9', ext_options), - ('e1071', '1.6-1', ext_options), - ('nnet', '7.3-7', ext_options), - ('car', '2.0-19', ext_options), - ('colorspace', '1.2-4', ext_options), - ('robustbase', '0.9-10', ext_options), - ('sp', '1.0-14', ext_options), - ('vcd', '1.3-1', ext_options), - ('snowfall', '1.84-4', ext_options), - ('rpart', '4.1-3', ext_options), - ('mice', '2.18', ext_options), - ('nlme', '3.1-111', ext_options), - ('mgcv', '1.7-27', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-11', ext_options), - ('bitops', '1.0-6', ext_options), - ('boot', '1.3-9', ext_options), - ('cluster', '1.14.4', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('DBI', '0.2-7', ext_options), - ('foreign', '0.8-57', ext_options), - ('survival', '2.37-4', ext_options), - ('gam', '1.09', ext_options), - ('gamlss.data', '4.2-6', ext_options), - ('gamlss.dist', '4.2-0', ext_options), - ('hwriter', '1.3', ext_options), - ('KernSmooth', '2.23-10', ext_options), - ('zoo', '1.7-10', ext_options), - ('lmtest', '0.9-32', ext_options), - ('mnormt', '1.4-5', ext_options), - ('mvtnorm', '0.9-9996', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('RSQLite', '0.11.4', ext_options), - ('sandwich', '2.3-0', ext_options), - ('sfsmisc', '1.0-24', ext_options), - ('spatial', '7.3-7', ext_options), - ('VGAM', '0.9-3', ext_options), - ('waveslim', '1.7.1', ext_options), - ('xtable', '1.7-1', ext_options), - ('profileModel', '0.5-9', ext_options), - ('brglm', '0.5-9', ext_options), - ('deSolve', '1.10-8', ext_options), - ('odesolve', '0.9-9', ext_options), - ('tseriesChaos', '0.1-13', ext_options), - ('tseries', '0.10-32', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.2-0', ext_options), - ('R.methodsS3', '1.5.2', ext_options), - ('R.oo', '1.15.8', ext_options), - ('R.matlab', '2.0.5', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('BiocGenerics', '0.8.0', bioconductor_options), - ('Biobase', '2.22.0', bioconductor_options), - ('IRanges', '1.20.5', bioconductor_options), - ('AnnotationDbi', '1.24.0', bioconductor_options), - ('XVector', '0.2.0', bioconductor_options), - ('Biostrings', '2.30.0', bioconductor_options), - ('GenomicRanges', '1.14.3', bioconductor_options), - ('BSgenome', '1.30.0', bioconductor_options), - ('zlibbioc', '1.8.0', bioconductor_options), - ('Rsamtools', '1.14.1', bioconductor_options), - ('ShortRead', '1.20.0', bioconductor_options), - ('graph', '1.40.0', bioconductor_options), - ('igraph0', '0.5.7', ext_options), - ('gbm', '2.1', ext_options), - ('plyr', '1.8', ext_options), - ('dichromat', '2.0-0', ext_options), - ('Formula', '1.1-1', ext_options), - ('Hmisc', '3.13-0', ext_options), - ('stringr', '0.6.2', ext_options), - ('munsell', '0.4.2', ext_options), - ('labeling', '0.2', ext_options), - ('scales', '0.2.3', ext_options), - ('fastcluster', '1.1.11', ext_options), - ('reshape2', '1.2.2', ext_options), - ('digest', '0.6.3', ext_options), - ('gtable', '0.1.2', ext_options), - ('proto', '0.3-10', ext_options), - ('ggplot2', '0.9.3.1', ext_options), - ('leaps', '2.9', ext_options), - ('survival', '2.37-4', ext_options), - ('speff2trial', '1.0.4', ext_options), - ('nleqslv', '2.1', ext_options), - ('glmnet', '1.9-5', ext_options), - ('pim', '1.1.5.4', rforge_options), + ('irace', '1.04', local_ext_options), + ('rJava', '0.9-4', local_ext_options), + ('lattice', '0.20-24', local_ext_options), + ('RColorBrewer', '1.0-5', local_ext_options), + ('latticeExtra', '0.6-26', local_ext_options), + ('Matrix', '1.1-0', local_ext_options), + ('png', '0.1-6', local_ext_options), + ('Rcpp', '0.10.6', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2013.4-1', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('snow', '0.3-13', local_ext_options), + ('MASS', '7.3-29', local_ext_options), + ('class', '7.3-9', local_ext_options), + ('e1071', '1.6-1', local_ext_options), + ('nnet', '7.3-7', local_ext_options), + ('car', '2.0-19', local_ext_options), + ('colorspace', '1.2-4', local_ext_options), + ('robustbase', '0.9-10', local_ext_options), + ('sp', '1.0-14', local_ext_options), + ('vcd', '1.3-1', local_ext_options), + ('snowfall', '1.84-4', local_ext_options), + ('rpart', '4.1-3', local_ext_options), + ('mice', '2.18', local_ext_options), + ('nlme', '3.1-111', local_ext_options), + ('mgcv', '1.7-27', local_ext_options), + ('logistf', '1.21', local_ext_options), + ('akima', '0.5-11', local_ext_options), + ('bitops', '1.0-6', local_ext_options), + ('boot', '1.3-9', local_ext_options), + ('cluster', '1.14.4', local_ext_options), + ('coda', '0.16-1', local_ext_options), + ('codetools', '0.2-8', local_ext_options), + ('DBI', '0.2-7', local_ext_options), + ('foreign', '0.8-57', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('gam', '1.09', local_ext_options), + ('gamlss.data', '4.2-6', local_ext_options), + ('gamlss.dist', '4.2-0', local_ext_options), + ('hwriter', '1.3', local_ext_options), + ('KernSmooth', '2.23-10', local_ext_options), + ('zoo', '1.7-10', local_ext_options), + ('lmtest', '0.9-32', local_ext_options), + ('mnormt', '1.4-5', local_ext_options), + ('mvtnorm', '0.9-9996', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('pscl', '1.04.4', local_ext_options), + ('RSQLite', '0.11.4', local_ext_options), + ('sandwich', '2.3-0', local_ext_options), + ('sfsmisc', '1.0-24', local_ext_options), + ('spatial', '7.3-7', local_ext_options), + ('VGAM', '0.9-3', local_ext_options), + ('waveslim', '1.7.1', local_ext_options), + ('xtable', '1.7-1', local_ext_options), + ('profileModel', '0.5-9', local_ext_options), + ('brglm', '0.5-9', local_ext_options), + ('deSolve', '1.10-8', local_ext_options), + ('odesolve', '0.9-9', local_ext_options), + ('tseriesChaos', '0.1-13', local_ext_options), + ('tseries', '0.10-32', local_ext_options), + ('neuRosim', '0.2-10', local_ext_options), + ('fastICA', '1.2-0', local_ext_options), + ('R.methodsS3', '1.5.2', local_ext_options), + ('R.oo', '1.15.8', local_ext_options), + ('R.matlab', '2.0.5', local_ext_options), + ('Rniftilib', '0.0-32', local_ext_options), + ('BiocGenerics', '0.8.0', local_bioconductor_options), + ('Biobase', '2.22.0', local_bioconductor_options), + ('IRanges', '1.20.5', local_bioconductor_options), + ('AnnotationDbi', '1.24.0', local_bioconductor_options), + ('XVector', '0.2.0', local_bioconductor_options), + ('Biostrings', '2.30.0', local_bioconductor_options), + ('GenomicRanges', '1.14.3', local_bioconductor_options), + ('BSgenome', '1.30.0', local_bioconductor_options), + ('zlibbioc', '1.8.0', local_bioconductor_options), + ('Rsamtools', '1.14.1', local_bioconductor_options), + ('ShortRead', '1.20.0', local_bioconductor_options), + ('graph', '1.40.0', local_bioconductor_options), + ('igraph0', '0.5.7', local_ext_options), + ('gbm', '2.1', local_ext_options), + ('plyr', '1.8', local_ext_options), + ('dichromat', '2.0-0', local_ext_options), + ('Formula', '1.1-1', local_ext_options), + ('Hmisc', '3.13-0', local_ext_options), + ('stringr', '0.6.2', local_ext_options), + ('munsell', '0.4.2', local_ext_options), + ('labeling', '0.2', local_ext_options), + ('scales', '0.2.3', local_ext_options), + ('fastcluster', '1.1.11', local_ext_options), + ('reshape2', '1.2.2', local_ext_options), + ('digest', '0.6.3', local_ext_options), + ('gtable', '0.1.2', local_ext_options), + ('proto', '0.3-10', local_ext_options), + ('ggplot2', '0.9.3.1', local_ext_options), + ('leaps', '2.9', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('speff2trial', '1.0.4', local_ext_options), + ('nleqslv', '2.1', local_ext_options), + ('glmnet', '1.9-5', local_ext_options), + ('pim', '1.1.5.4', local_rforge_options), ] moduleclass = 'lang' diff --git a/r/R/R-3.0.2-ictce-5.5.0.eb b/r/R/R-3.0.2-ictce-5.5.0.eb index 6097c713..9bbcda28 100644 --- a/r/R/R-3.0.2-ictce-5.5.0.eb +++ b/r/R/R-3.0.2-ictce-5.5.0.eb @@ -55,28 +55,28 @@ sanity_check_paths = { SHLIB_EXT], 'dirs': []} -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.13/bioc/src/contrib/', ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # some packages seem to only be in rforge, not in cran -rforge_options = { +local_rforge_options = { 'source_urls': ['http://download.r-forge.r-project.org/src/contrib/'], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # !! order of packages is important !! @@ -94,106 +94,106 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('irace', '1.04', ext_options), - ('rJava', '0.9-4', ext_options), - ('lattice', '0.20-24', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-26', ext_options), - ('Matrix', '1.1-0', ext_options), - ('png', '0.1-6', ext_options), - ('Rcpp', '0.10.6', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2013.4-1', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('snow', '0.3-13', ext_options), - ('MASS', '7.3-29', ext_options), - ('class', '7.3-9', ext_options), - ('e1071', '1.6-1', ext_options), - ('nnet', '7.3-7', ext_options), - ('car', '2.0-19', ext_options), - ('colorspace', '1.2-4', ext_options), - ('robustbase', '0.9-10', ext_options), - ('sp', '1.0-14', ext_options), - ('vcd', '1.3-1', ext_options), - ('snowfall', '1.84-4', ext_options), - ('rpart', '4.1-3', ext_options), - ('mice', '2.18', ext_options), - ('nlme', '3.1-111', ext_options), - ('mgcv', '1.7-27', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-11', ext_options), - ('bitops', '1.0-6', ext_options), - ('boot', '1.3-9', ext_options), - ('cluster', '1.14.4', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('DBI', '0.2-7', ext_options), - ('foreign', '0.8-57', ext_options), - ('survival', '2.37-4', ext_options), - ('gam', '1.09', ext_options), - ('gamlss.data', '4.2-6', ext_options), - ('gamlss.dist', '4.2-0', ext_options), - ('hwriter', '1.3', ext_options), - ('KernSmooth', '2.23-10', ext_options), - ('zoo', '1.7-10', ext_options), - ('lmtest', '0.9-32', ext_options), - ('mnormt', '1.4-5', ext_options), - ('mvtnorm', '0.9-9996', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('RSQLite', '0.11.4', ext_options), - ('sandwich', '2.3-0', ext_options), - ('sfsmisc', '1.0-24', ext_options), - ('spatial', '7.3-7', ext_options), - ('VGAM', '0.9-3', ext_options), - ('waveslim', '1.7.1', ext_options), - ('xtable', '1.7-1', ext_options), - ('profileModel', '0.5-9', ext_options), - ('brglm', '0.5-9', ext_options), - ('deSolve', '1.10-8', ext_options), - ('odesolve', '0.9-9', ext_options), - ('tseriesChaos', '0.1-13', ext_options), - ('tseries', '0.10-32', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.2-0', ext_options), - ('R.methodsS3', '1.5.2', ext_options), - ('R.oo', '1.15.8', ext_options), - ('R.matlab', '2.0.5', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('BiocGenerics', '0.8.0', bioconductor_options), - ('Biobase', '2.22.0', bioconductor_options), - ('IRanges', '1.20.5', bioconductor_options), - ('AnnotationDbi', '1.24.0', bioconductor_options), - ('XVector', '0.2.0', bioconductor_options), - ('Biostrings', '2.30.0', bioconductor_options), - ('GenomicRanges', '1.14.3', bioconductor_options), - ('BSgenome', '1.30.0', bioconductor_options), - ('zlibbioc', '1.8.0', bioconductor_options), - ('Rsamtools', '1.14.1', bioconductor_options), - ('ShortRead', '1.20.0', bioconductor_options), - ('graph', '1.40.0', bioconductor_options), - ('igraph0', '0.5.7', ext_options), - ('gbm', '2.1', ext_options), - ('plyr', '1.8', ext_options), - ('dichromat', '2.0-0', ext_options), - ('Formula', '1.1-1', ext_options), - ('Hmisc', '3.13-0', ext_options), - ('stringr', '0.6.2', ext_options), - ('munsell', '0.4.2', ext_options), - ('labeling', '0.2', ext_options), - ('scales', '0.2.3', ext_options), - ('fastcluster', '1.1.11', ext_options), - ('reshape2', '1.2.2', ext_options), - ('digest', '0.6.3', ext_options), - ('gtable', '0.1.2', ext_options), - ('proto', '0.3-10', ext_options), - ('ggplot2', '0.9.3.1', ext_options), - ('leaps', '2.9', ext_options), - ('survival', '2.37-4', ext_options), - ('speff2trial', '1.0.4', ext_options), - ('nleqslv', '2.1', ext_options), - ('glmnet', '1.9-5', ext_options), - ('pim', '1.1.5.4', rforge_options), + ('irace', '1.04', local_ext_options), + ('rJava', '0.9-4', local_ext_options), + ('lattice', '0.20-24', local_ext_options), + ('RColorBrewer', '1.0-5', local_ext_options), + ('latticeExtra', '0.6-26', local_ext_options), + ('Matrix', '1.1-0', local_ext_options), + ('png', '0.1-6', local_ext_options), + ('Rcpp', '0.10.6', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2013.4-1', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('snow', '0.3-13', local_ext_options), + ('MASS', '7.3-29', local_ext_options), + ('class', '7.3-9', local_ext_options), + ('e1071', '1.6-1', local_ext_options), + ('nnet', '7.3-7', local_ext_options), + ('car', '2.0-19', local_ext_options), + ('colorspace', '1.2-4', local_ext_options), + ('robustbase', '0.9-10', local_ext_options), + ('sp', '1.0-14', local_ext_options), + ('vcd', '1.3-1', local_ext_options), + ('snowfall', '1.84-4', local_ext_options), + ('rpart', '4.1-3', local_ext_options), + ('mice', '2.18', local_ext_options), + ('nlme', '3.1-111', local_ext_options), + ('mgcv', '1.7-27', local_ext_options), + ('logistf', '1.21', local_ext_options), + ('akima', '0.5-11', local_ext_options), + ('bitops', '1.0-6', local_ext_options), + ('boot', '1.3-9', local_ext_options), + ('cluster', '1.14.4', local_ext_options), + ('coda', '0.16-1', local_ext_options), + ('codetools', '0.2-8', local_ext_options), + ('DBI', '0.2-7', local_ext_options), + ('foreign', '0.8-57', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('gam', '1.09', local_ext_options), + ('gamlss.data', '4.2-6', local_ext_options), + ('gamlss.dist', '4.2-0', local_ext_options), + ('hwriter', '1.3', local_ext_options), + ('KernSmooth', '2.23-10', local_ext_options), + ('zoo', '1.7-10', local_ext_options), + ('lmtest', '0.9-32', local_ext_options), + ('mnormt', '1.4-5', local_ext_options), + ('mvtnorm', '0.9-9996', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('pscl', '1.04.4', local_ext_options), + ('RSQLite', '0.11.4', local_ext_options), + ('sandwich', '2.3-0', local_ext_options), + ('sfsmisc', '1.0-24', local_ext_options), + ('spatial', '7.3-7', local_ext_options), + ('VGAM', '0.9-3', local_ext_options), + ('waveslim', '1.7.1', local_ext_options), + ('xtable', '1.7-1', local_ext_options), + ('profileModel', '0.5-9', local_ext_options), + ('brglm', '0.5-9', local_ext_options), + ('deSolve', '1.10-8', local_ext_options), + ('odesolve', '0.9-9', local_ext_options), + ('tseriesChaos', '0.1-13', local_ext_options), + ('tseries', '0.10-32', local_ext_options), + ('neuRosim', '0.2-10', local_ext_options), + ('fastICA', '1.2-0', local_ext_options), + ('R.methodsS3', '1.5.2', local_ext_options), + ('R.oo', '1.15.8', local_ext_options), + ('R.matlab', '2.0.5', local_ext_options), + ('Rniftilib', '0.0-32', local_ext_options), + ('BiocGenerics', '0.8.0', local_bioconductor_options), + ('Biobase', '2.22.0', local_bioconductor_options), + ('IRanges', '1.20.5', local_bioconductor_options), + ('AnnotationDbi', '1.24.0', local_bioconductor_options), + ('XVector', '0.2.0', local_bioconductor_options), + ('Biostrings', '2.30.0', local_bioconductor_options), + ('GenomicRanges', '1.14.3', local_bioconductor_options), + ('BSgenome', '1.30.0', local_bioconductor_options), + ('zlibbioc', '1.8.0', local_bioconductor_options), + ('Rsamtools', '1.14.1', local_bioconductor_options), + ('ShortRead', '1.20.0', local_bioconductor_options), + ('graph', '1.40.0', local_bioconductor_options), + ('igraph0', '0.5.7', local_ext_options), + ('gbm', '2.1', local_ext_options), + ('plyr', '1.8', local_ext_options), + ('dichromat', '2.0-0', local_ext_options), + ('Formula', '1.1-1', local_ext_options), + ('Hmisc', '3.13-0', local_ext_options), + ('stringr', '0.6.2', local_ext_options), + ('munsell', '0.4.2', local_ext_options), + ('labeling', '0.2', local_ext_options), + ('scales', '0.2.3', local_ext_options), + ('fastcluster', '1.1.11', local_ext_options), + ('reshape2', '1.2.2', local_ext_options), + ('digest', '0.6.3', local_ext_options), + ('gtable', '0.1.2', local_ext_options), + ('proto', '0.3-10', local_ext_options), + ('ggplot2', '0.9.3.1', local_ext_options), + ('leaps', '2.9', local_ext_options), + ('survival', '2.37-4', local_ext_options), + ('speff2trial', '1.0.4', local_ext_options), + ('nleqslv', '2.1', local_ext_options), + ('glmnet', '1.9-5', local_ext_options), + ('pim', '1.1.5.4', local_rforge_options), ] moduleclass = 'lang' diff --git a/r/R/R-3.1.1-ictce-5.5.0.eb b/r/R/R-3.1.1-ictce-5.5.0.eb index 58b7b277..5d12bfb7 100644 --- a/r/R/R-3.1.1-ictce-5.5.0.eb +++ b/r/R/R-3.1.1-ictce-5.5.0.eb @@ -23,21 +23,21 @@ dependencies = [ ('Java', '1.7.0_79', '', True), ] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.freestatistics.org/src/contrib', # alternative for packages ], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # Bioconductor packages have a different download url -bioconductor_options = { +local_bioconductor_options = { 'source_urls': [ 'http://www.bioconductor.org/packages/release/bioc/src/contrib/', 'http://www.bioconductor.org/packages/2.14/bioc/src/contrib/'], - 'source_tmpl': name_tmpl, + 'source_tmpl': local_name_tmpl, } # !! order of packages is important !! exts_list = [ @@ -54,131 +54,131 @@ exts_list = [ 'tools', 'utils', # non-standard libraries, should be specified with fixed versions! - ('irace', '1.04', ext_options), - ('rJava', '0.9-6', ext_options), - ('lattice', '0.20-29', ext_options), - ('RColorBrewer', '1.0-5', ext_options), - ('latticeExtra', '0.6-26', ext_options), - ('Matrix', '1.1-3', ext_options), - ('png', '0.1-7', ext_options), - ('Rcpp', '0.11.1', ext_options), - ('quadprog', '1.5-5', ext_options), - ('BB', '2014.1-1', ext_options), - ('rlecuyer', '0.3-3', ext_options), - ('snow', '0.3-13', ext_options), - ('MASS', '7.3-33', ext_options), - ('class', '7.3-10', ext_options), - ('e1071', '1.6-3', ext_options), - ('nnet', '7.3-8', ext_options), - ('car', '2.0-20', ext_options), - ('colorspace', '1.2-4', ext_options), - ('DEoptimR', '1.0-1', ext_options), - ('robustbase', '0.91-1', ext_options), - ('sp', '1.0-15', ext_options), - ('vcd', '1.3-1', ext_options), - ('snowfall', '1.84-6', ext_options), - ('rpart', '4.1-8', ext_options), - ('randomForest', '4.6-7', ext_options), - ('mice', '2.21', ext_options), - ('nlme', '3.1-117', ext_options), - ('mgcv', '1.7-29', ext_options), - ('logistf', '1.21', ext_options), - ('akima', '0.5-11', ext_options), - ('bitops', '1.0-6', ext_options), - ('boot', '1.3-11', ext_options), - ('cluster', '1.15.2', ext_options), - ('coda', '0.16-1', ext_options), - ('codetools', '0.2-8', ext_options), - ('DBI', '0.2-7', ext_options), - ('foreign', '0.8-61', ext_options), - ('survival', '2.37-7', ext_options), - ('gam', '1.09.1', ext_options), - ('gamlss.data', '4.2-7', ext_options), - ('gamlss.dist', '4.2-7', ext_options), - ('hwriter', '1.3', ext_options), - ('KernSmooth', '2.23-12', ext_options), - ('zoo', '1.7-11', ext_options), - ('lmtest', '0.9-33', ext_options), - ('mnormt', '1.4-7', ext_options), - ('mvtnorm', '0.9-99992', ext_options), - ('numDeriv', '2012.9-1', ext_options), - ('pscl', '1.04.4', ext_options), - ('RSQLite', '0.11.4', ext_options), - ('sandwich', '2.3-0', ext_options), - ('sfsmisc', '1.0-25', ext_options), - ('spatial', '7.3-8', ext_options), - ('VGAM', '0.9-4', ext_options), - ('waveslim', '1.7.3', ext_options), - ('xtable', '1.7-3', ext_options), - ('profileModel', '0.5-9', ext_options), - ('brglm', '0.5-9', ext_options), - ('deSolve', '1.10-8', ext_options), - ('tseriesChaos', '0.1-13', ext_options), - ('tseries', '0.10-32', ext_options), - ('neuRosim', '0.2-10', ext_options), - ('fastICA', '1.2-0', ext_options), - ('R.methodsS3', '1.6.1', ext_options), - ('R.oo', '1.18.0', ext_options), - ('R.utils', '1.32.4', ext_options), - ('R.matlab', '3.0.1', ext_options), - ('Rniftilib', '0.0-32', ext_options), - ('iterators', '1.0.7', ext_options), - ('foreach', '1.4.2', ext_options), - ('BBmisc', '1.6', ext_options), - ('digest', '0.6.4', ext_options), - ('base64enc', '0.1-1', ext_options), - ('sendmailR', '1.1-2', ext_options), - ('brew', '1.0-6', ext_options), - ('plyr', '1.8.1', ext_options), - ('stringr', '0.6.2', ext_options), - ('fail', '1.2', ext_options), - ('BatchJobs', '1.2', ext_options), - ('BiocGenerics', '0.10.0', 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'1.20.0', local_ext_options), + ('miscTools', '0.6-16', local_ext_options), + ('maxLik', '1.2-0', local_ext_options), + ('statmod', '1.4.20', local_ext_options), + ('mlogit', '0.2-4', local_ext_options), + ('optparse', '1.2.0', local_ext_options), + ('permute', '0.8-3', local_ext_options), + ('vegan', '2.0-10', local_ext_options), + ('gtools', '3.4.1', local_ext_options), + ('combinat', '0.0-8', local_ext_options), + ('klaR', '0.6-11', local_ext_options), ] moduleclass = 'lang' diff --git a/r/R/R-3.2.0-goolf-1.7.20.eb b/r/R/R-3.2.0-goolf-1.7.20.eb index d0e87ba1..cf59ea49 100644 --- a/r/R/R-3.2.0-goolf-1.7.20.eb +++ b/r/R/R-3.2.0-goolf-1.7.20.eb @@ -28,8 +28,8 @@ dependencies = [ ('libxml2', '2.9.2'), # for XML ] -name_tmpl = '%(name)s_%(version)s.tar.gz' -ext_options = { +local_name_tmpl = '%(name)s_%(version)s.tar.gz' +local_ext_options = { 'source_urls': [ # package archive 'http://cran.r-project.org/src/contrib/Archive/%(name)s', @@ -37,7 +37,7 @@ ext_options = { # mirror 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ext_options), - ('locfit', '1.5-9.1', ext_options), - ('GGally', '0.5.0', ext_options), - ('beanplot', '1.2', ext_options), - ('clValid', '0.6-6', ext_options), - ('matrixStats', '0.14.0', ext_options), - ('DiscriMiner', '0.1-29', ext_options), - ('ellipse', '0.3-8', ext_options), - ('leaps', '2.9', ext_options), - ('nloptr', '1.0.4', ext_options), - ('lme4', '1.1-8', ext_options), - ('pbkrtest', '0.4-2', ext_options), - ('car', '2.0-25', ext_options), - ('flashClust', '1.01-2', ext_options), - ('FactoMineR', '1.29', ext_options), - ('modeltools', '0.2-21', ext_options), - ('flexclust', '1.3-4', ext_options), - ('flexmix', '2.3-13', ext_options), - ('prabclus', '2.2-6', ext_options), - ('diptest', '0.75-6', ext_options), - ('trimcluster', '0.1-2', ext_options), - ('fpc', '2.1-9', ext_options), - ('BiasedUrn', '1.06.1', ext_options), - ('TeachingDemos', '2.9', ext_options), - ('jsonlite', '0.9.16', ext_options), - ('kohonen', '2.0.18', ext_options), - ('base64', '1.1', ext_options), - ('registry', '0.2', ext_options), - ('pkgmaker', '0.22', ext_options), - ('rngtools', '1.2.4', ext_options), - ('doRNG', '1.6', ext_options), - ('nleqslv', '2.7', ext_options), - ('RGCCA', '2.0', ext_options), - ('pheatmap', '1.0.2', ext_options), - ('openxlsx', '2.4.0', ext_options), - ('pvclust', '1.3-2', ext_options), - ('RCircos', '1.1.2', ext_options), - ('VennDiagram', '1.6.9', ext_options), - ('xlsxjars', '0.6.1', ext_options), - ('xlsx', '0.5.7', ext_options), - ('vegan', '2.3-0', ext_options), - ('forecast', '6.1', ext_options), - ('fma', '2.01', ext_options), - ('expsmooth', '2.3', ext_options), - ('fpp', '0.5', ext_options), - ('XML', '3.98-1.1', ext_options), - ('memoise', '0.2.1', ext_options), - ('crayon', '1.3.1', ext_options), - ('testthat', '0.10.0', ext_options), - ('rmarkdown', '0.7', ext_options), - ('curl', '0.9.1', ext_options), - ('RCurl', '1.95-4.7', ext_options), - ('httr', '0.6.1', ext_options), - ('maptools', '0.8-36', ext_options), - ('deldir', '0.1-9', ext_options), - ('tensor', '1.5', ext_options), - ('polyclip', '1.3-0', ext_options), - ('goftest', '1.0-2', ext_options), - ('spatstat', '1.41-1', ext_options), - ('gdalUtils', '0.3.1', ext_options), - ('pracma', '1.8.3', ext_options), - ('bio3d', '2.2-2', ext_options), - ('penalized', '0.9-45', ext_options), - ('coin', '1.0-24', ext_options), - ('clusterRepro', '0.5-1.1', ext_options), - ('randomForestSRC', '2.0.7', ext_options), - ('sm', '2.2-5.4', ext_options), + #('Rmpi', '0.6-5', dict(local_ext_options.items() + [('patches', ['Rmpi-0.6-5_impi5.patch'])])), + ('abind', '1.4-3', local_ext_options), + ('magic', '1.5-6', local_ext_options), + ('geometry', '0.3-5', local_ext_options), + ('bit', '1.1-12', local_ext_options), + ('filehash', '2.2-2', local_ext_options), + ('ff', '2.2-13', local_ext_options), + ('bnlearn', '3.7.1', local_ext_options), + ('bootstrap', '2015.2', local_ext_options), + ('combinat', '0.0-8', local_ext_options), + ('deal', '1.2-37', local_ext_options), + ('fdrtool', '1.2.14', local_ext_options), + ('formatR', '1.2', local_ext_options), + ('gtools', '3.4.2', local_ext_options), + ('gdata', '2.13.3', local_ext_options), + ('GSA', '1.03', local_ext_options), + ('highr', '0.5', local_ext_options), + ('infotheo', '1.2.0', local_ext_options), + ('lars', '1.2', local_ext_options), + ('lazy', '1.2-15', local_ext_options), + ('kernlab', '0.9-20', local_ext_options), + ('mime', '0.3', local_ext_options), + ('markdown', '0.7.7', local_ext_options), + ('mlbench', '2.1-1', local_ext_options), + ('NLP', '0.1-6', local_ext_options), + ('mclust', '5.0.1', local_ext_options), + ('RANN', '2.5', local_ext_options), + ('rmeta', '2.16', local_ext_options), + ('segmented', '0.5-1.1', local_ext_options), + ('som', '0.3-5', local_ext_options), + ('SuppDists', '1.1-9.1', local_ext_options), + ('stabledist', '0.6-6', local_ext_options), + ('survivalROC', '1.0.3', local_ext_options), + ('pspline', '1.0-16', local_ext_options), + ('timeDate', '3012.100', local_ext_options), + ('longmemo', '1.0-0', local_ext_options), + ('ADGofTest', '0.3', local_ext_options), + ('ade4', '1.7-2', local_ext_options), + ('AlgDesign', '1.1-7.3', local_ext_options), + ('base64enc', '0.1-2', local_ext_options), + ('BH', '1.55.0-3', local_ext_options), + ('brew', '1.0-6', local_ext_options), + ('Brobdingnag', '1.2-4', local_ext_options), + ('corpcor', '1.6.7', local_ext_options), + ('longitudinal', '1.1.11', local_ext_options), + ('checkmate', '1.5.2', local_ext_options), + ('cubature', '1.1-2', local_ext_options), + ('DEoptimR', '1.0-2', local_ext_options), + ('digest', '0.6.8', local_ext_options), + ('fastmatch', '1.0-4', local_ext_options), + ('ffbase', '0.11.3', local_ext_options), + ('iterators', '1.0.7', local_ext_options), + ('maps', '2.3-9', local_ext_options), + ('nnls', '1.4', local_ext_options), + ('sendmailR', '1.2-1', local_ext_options), + ('spam', '1.0-1', local_ext_options), + ('subplex', '1.1-4', local_ext_options), + ('stringr', '0.6.2', local_ext_options), + ('evaluate', '0.7', local_ext_options), + ('logspline', '2.1.5', local_ext_options), + ('ncbit', '2013.03.29', local_ext_options), + ('permute', '0.8-3', local_ext_options), + ('plotrix', '3.5-11', local_ext_options), + ('randomForest', '4.6-10', local_ext_options), + ('scatterplot3d', '0.3-35', local_ext_options), + ('SparseM', '1.6', local_ext_options), + ('tripack', '1.3-6', local_ext_options), + ('irace', '1.06', local_ext_options), + ('rJava', '0.9-6', local_ext_options), + ('lattice', '0.20-31', local_ext_options), + ('RColorBrewer', '1.1-2', local_ext_options), + ('latticeExtra', '0.6-26', local_ext_options), + ('Matrix', '1.2-0', local_ext_options), + ('png', '0.1-7', local_ext_options), + ('Rcpp', '0.11.5', local_ext_options), + ('RcppArmadillo', '0.5.000.0', local_ext_options), + ('plyr', '1.8.2', local_ext_options), + ('pROC', '1.7.3', local_ext_options), + ('quadprog', '1.5-5', local_ext_options), + ('BB', '2014.10-1', local_ext_options), + ('BBmisc', '1.9', local_ext_options), + ('fail', '1.2', local_ext_options), + ('rlecuyer', '0.3-3', local_ext_options), + ('snow', '0.3-13', local_ext_options), + ('MASS', '7.3-40', local_ext_options), + ('tree', '1.0-35', local_ext_options), + ('pls', '2.4-3', local_ext_options), + ('class', '7.3-12', local_ext_options), + ('e1071', '1.6-4', local_ext_options), + ('nnet', '7.3-9', local_ext_options), + ('nlme', '3.1-120', local_ext_options), + ('minqa', '1.2.4', local_ext_options), + ('RcppEigen', '0.3.2.4.0', local_ext_options), + ('quantreg', '5.11', local_ext_options), + ('mgcv', '1.8-6', local_ext_options), + ('colorspace', '1.2-6', local_ext_options), + ('robustbase', '0.92-3', local_ext_options), + ('sp', '1.1-0', local_ext_options), + ('vcd', '1.3-2', local_ext_options), + ('snowfall', '1.84-6', local_ext_options), + ('rpart', '4.1-9', local_ext_options), + ('mice', '2.22', local_ext_options), + ('urca', '1.2-8', local_ext_options), + ('fracdiff', '1.4-2', local_ext_options), + ('logistf', '1.21', local_ext_options), + ('akima', '0.5-11', local_ext_options), + ('bitops', '1.0-6', local_ext_options), + ('boot', '1.3-15', local_ext_options), + ('mixtools', '1.0.3', local_ext_options), + ('cluster', '2.0.1', local_ext_options), + ('gclus', '1.3.1', local_ext_options), + ('coda', '0.17-1', local_ext_options), + ('codetools', '0.2-11', local_ext_options), + ('foreach', '1.4.2', local_ext_options), + ('doMC', '1.3.3', local_ext_options), + ('DBI', '0.3.1', local_ext_options), + ('foreign', '0.8-63', local_ext_options), + ('survival', '2.38-1', local_ext_options), + ('gam', '1.09.1', local_ext_options), + ('gamlss.data', '4.2-7', local_ext_options), + ('gamlss.dist', '4.3-4', local_ext_options), + ('hwriter', '1.3.2', local_ext_options), + ('KernSmooth', '2.23-14', local_ext_options), + ('zoo', '1.7-12', local_ext_options), + ('xts', '0.9-7', local_ext_options), + ('TTR', '0.22-0', local_ext_options), + ('quantmod', '0.4-4', local_ext_options), + ('lmtest', '0.9-33', local_ext_options), + ('mnormt', '1.5-2', local_ext_options), + ('mvtnorm', '1.0-2', local_ext_options), + ('pcaPP', '1.9-60', local_ext_options), + ('numDeriv', '2012.9-1', local_ext_options), + ('lava', '1.4.0', local_ext_options), + ('prodlim', '1.5.1', local_ext_options), + ('pscl', '1.4.9', local_ext_options), + ('RSQLite', '1.0.0', local_ext_options), + ('BatchJobs', '1.6', local_ext_options), + ('sandwich', '2.3-3', local_ext_options), + ('sfsmisc', '1.0-27', local_ext_options), + ('spatial', '7.3-9', local_ext_options), + ('VGAM', '0.9-7', local_ext_options), + ('waveslim', '1.7.5', local_ext_options), + ('xtable', '1.7-4', local_ext_options), + ('profileModel', '0.5-9', local_ext_options), + ('brglm', '0.5-9', local_ext_options), + ('deSolve', '1.11', local_ext_options), + ('tseriesChaos', '0.1-13', local_ext_options), + ('tseries', '0.10-34', local_ext_options), + ('fastICA', '1.2-0', local_ext_options), + ('R.methodsS3', '1.7.0', local_ext_options), + ('R.oo', '1.19.0', local_ext_options), + ('cgdsr', '1.1.33', local_ext_options), + ('R.utils', '2.0.1', local_ext_options), + ('R.matlab', '3.2.0', local_ext_options), + ('gbm', '2.1.1', local_ext_options), + ('dichromat', '2.0-0', local_ext_options), + ('Formula', '1.2-1', local_ext_options), + ('acepack', '1.3-3.3', local_ext_options), + ('reshape2', '1.4.1', local_ext_options), + ('gtable', '0.1.2', local_ext_options), + ('munsell', '0.4.2', local_ext_options), + ('labeling', '0.3', local_ext_options), + ('scales', '0.2.4', local_ext_options), + ('proto', '0.3-10', local_ext_options), + ('ggplot2', '1.0.1', local_ext_options), + ('Hmisc', '3.15-0', local_ext_options), + ('fastcluster', '1.1.16', local_ext_options), + ('chron', '2.3-45', local_ext_options), + ('data.table', '1.9.4', local_ext_options), + ('igraph', '0.7.1', local_ext_options), + ('GeneNet', '1.2.12', local_ext_options), + ('ape', '3.2', local_ext_options), + ('htmltools', '0.2.6', local_ext_options), + ('RJSONIO', '1.3-0', local_ext_options), + ('caTools', '1.17.1', local_ext_options), + ('gplots', '2.16.0', local_ext_options), + ('ROCR', '1.0-7', local_ext_options), + ('httpuv', '1.3.2', local_ext_options), + ('R6', '2.0.1', local_ext_options), + ('shiny', '0.11.1', local_ext_options), + ('adegenet', '1.4-2', local_ext_options), + ('phylobase', '0.6.8', local_ext_options), + ('adephylo', '1.1-6', local_ext_options), + ('animation', '2.3', local_ext_options), + ('bigmemory.sri', '0.1.3', local_ext_options), + ('bigmemory', '4.4.6', local_ext_options), + ('calibrate', '1.7.2', local_ext_options), + ('clusterGeneration', '1.3.4', local_ext_options), + ('raster', '2.3-40', local_ext_options), + ('dismo', '1.0-12', local_ext_options), + ('expm', '0.99-1.1', local_ext_options), + ('extrafontdb', '1.0', local_ext_options), + ('Rttf2pt1', '1.3.3', local_ext_options), + ('extrafont', '0.17', local_ext_options), + ('fields', '8.2-1', local_ext_options), + ('shapefiles', '0.7', local_ext_options), + ('fossil', '0.3.7', local_ext_options), + ('geiger', '2.0.3', local_ext_options), + ('glmnet', '2.0-2', local_ext_options), + ('labdsv', '1.6-1', local_ext_options), + ('MatrixModels', '0.4-0', local_ext_options), + ('stabs', '0.5-1', local_ext_options), + ('mboost', '2.4-2', local_ext_options), + ('msm', '1.5', local_ext_options), + ('nor1mix', '1.2-0', local_ext_options), + ('np', '0.60-2', local_ext_options), + ('polynom', '1.3-8', local_ext_options), + ('quantreg', '5.11', local_ext_options), + ('polspline', '1.1.9', local_ext_options), + ('TH.data', '1.0-6', local_ext_options), + ('multlocal_comp', '1.4-0', local_ext_options), + ('gridExtra', '0.9.1', local_ext_options), + ('rms', '4.3-0', local_ext_options), + ('RWekajars', '3.7.12-1', local_ext_options), + ('RWeka', '0.4-24', local_ext_options), + ('slam', '0.1-32', local_ext_options), + ('tm', '0.6', local_ext_options), + ('TraMineR', '1.8-9', local_ext_options), + ('chemometrics', '1.3.9', local_ext_options), + ('FNN', '1.1', local_ext_options), + ('ipred', '0.9-4', local_ext_options), + ('yaml', '2.1.13', local_ext_options), + ('knitr', '1.10', local_ext_options), + ('statmod', '1.4.21', local_ext_options), + ('miscTools', '0.6-16', local_ext_options), + ('maxLik', '1.2-4', local_ext_options), + ('mlogit', '0.2-4', local_ext_options), + ('getopt', '1.20.0', local_ext_options), + ('gsalib', '2.1', local_ext_options), + ('reshape', '0.8.5', local_ext_options), + ('optparse', '1.3.0', local_ext_options), + ('klaR', '0.6-12', local_ext_options), + ('neuRosim', '0.2-12', local_ext_options), + ('locfit', '1.5-9.1', local_ext_options), + ('GGally', '0.5.0', local_ext_options), + ('beanplot', '1.2', local_ext_options), + ('clValid', '0.6-6', local_ext_options), + ('matrixStats', '0.14.0', local_ext_options), + ('DiscriMiner', '0.1-29', local_ext_options), + ('ellipse', '0.3-8', local_ext_options), + ('leaps', '2.9', local_ext_options), + ('nloptr', '1.0.4', local_ext_options), + ('lme4', '1.1-8', local_ext_options), + ('pbkrtest', '0.4-2', local_ext_options), + ('car', '2.0-25', local_ext_options), + ('flashClust', '1.01-2', local_ext_options), + ('FactoMineR', '1.29', local_ext_options), + ('modeltools', '0.2-21', local_ext_options), + ('flexclust', '1.3-4', local_ext_options), + ('flexmix', '2.3-13', local_ext_options), + ('prabclus', '2.2-6', local_ext_options), + ('diptest', '0.75-6', local_ext_options), + ('trimcluster', '0.1-2', local_ext_options), + ('fpc', '2.1-9', local_ext_options), + ('BiasedUrn', '1.06.1', local_ext_options), + ('TeachingDemos', '2.9', local_ext_options), + ('jsonlite', '0.9.16', local_ext_options), + ('kohonen', '2.0.18', local_ext_options), + ('base64', '1.1', local_ext_options), + ('registry', '0.2', local_ext_options), + ('pkgmaker', '0.22', local_ext_options), + ('rngtools', '1.2.4', local_ext_options), + ('doRNG', '1.6', local_ext_options), + ('nleqslv', '2.7', local_ext_options), + ('RGCCA', '2.0', local_ext_options), + ('pheatmap', '1.0.2', local_ext_options), + ('openxlsx', '2.4.0', local_ext_options), + ('pvclust', '1.3-2', local_ext_options), + ('RCircos', '1.1.2', local_ext_options), + ('VennDiagram', '1.6.9', local_ext_options), + ('xlsxjars', '0.6.1', local_ext_options), + ('xlsx', '0.5.7', local_ext_options), + ('vegan', '2.3-0', local_ext_options), + ('forecast', '6.1', local_ext_options), + ('fma', '2.01', local_ext_options), + ('expsmooth', '2.3', local_ext_options), + ('fpp', '0.5', local_ext_options), + ('XML', '3.98-1.1', local_ext_options), + ('memoise', '0.2.1', local_ext_options), + ('crayon', '1.3.1', local_ext_options), + ('testthat', '0.10.0', local_ext_options), + ('rmarkdown', '0.7', local_ext_options), + ('curl', '0.9.1', local_ext_options), + ('RCurl', '1.95-4.7', local_ext_options), + ('httr', '0.6.1', local_ext_options), + ('maptools', '0.8-36', local_ext_options), + ('deldir', '0.1-9', local_ext_options), + ('tensor', '1.5', local_ext_options), + ('polyclip', '1.3-0', local_ext_options), + ('goftest', '1.0-2', local_ext_options), + ('spatstat', '1.41-1', local_ext_options), + ('gdalUtils', '0.3.1', local_ext_options), + ('pracma', '1.8.3', local_ext_options), + ('bio3d', '2.2-2', local_ext_options), + ('penalized', '0.9-45', local_ext_options), + ('coin', '1.0-24', local_ext_options), + ('clusterRepro', '0.5-1.1', local_ext_options), + ('randomForestSRC', '2.0.7', local_ext_options), + ('sm', '2.2-5.4', local_ext_options), ] moduleclass = 'lang' diff --git a/r/ROOT/ROOT-v5.30.06-goolf-1.4.10.eb b/r/ROOT/ROOT-v5.30.06-goolf-1.4.10.eb index e0f75387..6061658f 100644 --- a/r/ROOT/ROOT-v5.30.06-goolf-1.4.10.eb +++ b/r/ROOT/ROOT-v5.30.06-goolf-1.4.10.eb @@ -11,13 +11,13 @@ toolchainopts = {'pic': True} sources = ['%(namelower)s_%(version)s.source.tar.gz'] source_urls = ['ftp://root.cern.ch/root/'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.5' dependencies = [ ('GSL', '1.16'), - ('libxml2', '2.9.1', '-%s-%s' % (python, local_pyver)), - (python, local_pyver), + ('libxml2', '2.9.1', '-%s-%s' % (local_python, local_pyver)), + (local_python, local_pyver), ] # architecture @@ -30,6 +30,6 @@ configopts += ' --enable-unuran --enable-table --enable-explicitlink --enable-mi configopts += ' --with-gsl-incdir=$EBROOTGSL/include/gsl --with-gsl-libdir=$EBROOTGSL/lib' configopts += ' --with-fftw3-incdir=$FFTW_INC_DIR --with-fftw3-libdir=$FFTW_LIB_DIR' configopts += ' --with-xml-incdir=$EBROOTLIBXML2/include/libxml2/libxml --with-xml-libdir=$EBROOTLIBXML2/lib' -configopts += ' --with-python-libdir=$EBROOTPYTHON/lib' +configopts += ' --with-local_python-libdir=$EBROOTPYTHON/lib' moduleclass = 'data' diff --git a/r/ROOT/ROOT-v5.34.01-goolf-1.4.10.eb b/r/ROOT/ROOT-v5.34.01-goolf-1.4.10.eb index 9c670021..3da11b82 100644 --- a/r/ROOT/ROOT-v5.34.01-goolf-1.4.10.eb +++ b/r/ROOT/ROOT-v5.34.01-goolf-1.4.10.eb @@ -11,13 +11,13 @@ toolchainopts = {'pic': True} sources = ['%s_%s.source.tar.gz' % (name.lower(), version)] source_urls = ['ftp://root.cern.ch/root/'] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.3' dependencies = [ ('GSL', '1.15'), - ('libxml2', '2.8.0', '-%s-%s' % (python, local_pyver)), - (python, local_pyver), + ('libxml2', '2.8.0', '-%s-%s' % (local_python, local_pyver)), + (local_python, local_pyver), ] # architecture @@ -30,6 +30,6 @@ configopts += ' --enable-unuran --enable-table --enable-explicitlink --enable-mi configopts += ' --with-gsl-incdir=$EBROOTGSL/include/gsl --with-gsl-libdir=$EBROOTGSL/lib' configopts += ' --with-xml-incdir=$EBROOTLIBXML2/include/libxml2/libxml --with-xml-libdir=$EBROOTLIBXML2/lib' configopts += ' --with-fftw3-incdir=$FFTW_INC_DIR --with-fftw3-libdir=$FFTW_LIB_DIR' -configopts += ' --with-python-libdir=$EBROOTPYTHON/lib' +configopts += ' --with-local_python-libdir=$EBROOTPYTHON/lib' moduleclass = 'data' diff --git a/r/ROOT/ROOT-v5.34.13-ictce-5.5.0.eb b/r/ROOT/ROOT-v5.34.13-ictce-5.5.0.eb index aae9a6b8..bf6e58c8 100644 --- a/r/ROOT/ROOT-v5.34.13-ictce-5.5.0.eb +++ b/r/ROOT/ROOT-v5.34.13-ictce-5.5.0.eb @@ -15,13 +15,13 @@ patches = [ 'ROOT-v5_recent-ifort.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.6' dependencies = [ ('GSL', '1.16'), - ('libxml2', '2.9.1', '-%s-%s' % (python, local_pyver)), - (python, local_pyver), + ('libxml2', '2.9.1', '-%s-%s' % (local_python, local_pyver)), + (local_python, local_pyver), ] # architecture @@ -34,6 +34,6 @@ configopts += ' --enable-unuran --enable-table --enable-explicitlink --enable-mi configopts += ' --with-gsl-incdir=$EBROOTGSL/include/gsl --with-gsl-libdir=$EBROOTGSL/lib' configopts += ' --with-fftw3-incdir=$MKLROOT/mkl/include/fftw --with-fftw3-libdir=$MKLROOT/mkl/lib/intel64' configopts += ' --with-xml-incdir=$EBROOTLIBXML2/include/libxml2/libxml --with-xml-libdir=$EBROOTLIBXML2/lib' -configopts += ' --with-python-libdir=$EBROOTPYTHON/lib' +configopts += ' --with-local_python-libdir=$EBROOTPYTHON/lib' moduleclass = 'data' diff --git a/r/ROOT/ROOT-v5.34.18-ictce-5.5.0.eb b/r/ROOT/ROOT-v5.34.18-ictce-5.5.0.eb index a663b199..35c6154d 100644 --- a/r/ROOT/ROOT-v5.34.18-ictce-5.5.0.eb +++ b/r/ROOT/ROOT-v5.34.18-ictce-5.5.0.eb @@ -15,17 +15,17 @@ patches = [ 'ROOT-v5_recent-ifort.patch', ] -python = 'Python' +local_python = 'Python' local_pyver = '2.7.6' dependencies = [ ('GSL', '1.16'), - ('Mesa', '7.11.2', '-%s-%s' % (python, local_pyver)), - ('libxml2', '2.9.1', '-%s-%s' % (python, local_pyver)), + ('Mesa', '7.11.2', '-%s-%s' % (local_python, local_pyver)), + ('libxml2', '2.9.1', '-%s-%s' % (local_python, local_pyver)), ('PCRE', '8.12'), ('CFITSIO', '3.34'), #('graphviz', '2.34.0'), Graphviz is optional, not in EB yet. - (python, local_pyver), + (local_python, local_pyver), ] # architecture @@ -38,6 +38,6 @@ configopts += ' --enable-unuran --enable-table --enable-explicitlink --enable-mi configopts += ' --with-gsl-incdir=$EBROOTGSL/include/gsl --with-gsl-libdir=$EBROOTGSL/lib' configopts += ' --with-fftw3-incdir=$EBROOTIMKL/mkl/include/fftw --with-fftw3-libdir=$EBROOTIMKL/mkl/lib/intel64' configopts += ' --with-xml-incdir=$EBROOTLIBXML2/include/libxml2/libxml --with-xml-libdir=$EBROOTLIBXML2/lib' -configopts += ' --with-python-libdir=$EBROOTPYTHON/lib' +configopts += ' --with-local_python-libdir=$EBROOTPYTHON/lib' moduleclass = 'data' diff --git a/r/Ruby/Ruby-2.3.4-test.eb b/r/Ruby/Ruby-2.3.4-test.eb index e6790472..a4ee4189 100644 --- a/r/Ruby/Ruby-2.3.4-test.eb +++ b/r/Ruby/Ruby-2.3.4-test.eb @@ -12,46 +12,46 @@ toolchain = SYSTEM sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://cache.ruby-lang.org/pub/ruby/'] -ext_options = { +local_ext_options = { 'source_urls': ['http://rubygems.org/downloads/'], 'source_tmpl': '%(name)s-%(version)s.gem', } exts_list = [ - ('ffi', '1.9.14', ext_options), - ('childprocess', '0.5.9', ext_options), - ('json', '2.0.2', ext_options), - ('cabin', '0.9.0', ext_options), - ('backports', '3.6.8', ext_options), - ('arr-pm', '0.0.10', ext_options), - ('clamp', '1.1.1', ext_options), - ('multipart-post', '2.0.0', ext_options), - ('faraday', '0.10.0', ext_options), - ('faraday_middleware', '0.10.1', ext_options), - ('highline', '1.7.8', ext_options), - ('net-http-pipeline', '1.0.1', ext_options), - ('net-http-persistent', '2.9.4', ext_options), - ('multi_json', '1.12.1', ext_options), - ('public_local_suffix', '2.0.4', ext_options), - ('addressable', '2.4.0', ext_options), - ('gh', '0.15.0', ext_options), - ('launchy', '2.4.3', ext_options), - ('ethon', '0.10.1', ext_options), - ('typhoeus', '0.6.9', ext_options), - ('websocket', '1.2.3', ext_options), - ('pusher-client', '0.6.2', ext_options), - ('diff-lcs', '1.2.5', ext_options), - ('rspec-support', '3.5.0', ext_options), - ('rspec-mocks', '3.5.0', ext_options), - ('rspec-expectations', '3.5.0', ext_options), - ('rspec-core', '3.5.4', ext_options), - ('rspec', '3.5.0', ext_options), - ('rack', '1.6.5', ext_options), - ('rack-protection', '1.5.3', ext_options), - ('tilt', '2.0.5', ext_options), - ('sinatra', '1.4.7', ext_options), - ('rack-test', '0.6.3', ext_options), - ('faraday', '0.12.0.1', ext_options), + ('ffi', '1.9.14', local_ext_options), + ('childprocess', '0.5.9', local_ext_options), + ('json', '2.0.2', local_ext_options), + ('cabin', '0.9.0', local_ext_options), + ('backports', '3.6.8', local_ext_options), + ('arr-pm', '0.0.10', local_ext_options), + ('clamp', '1.1.1', local_ext_options), + ('multipart-post', '2.0.0', local_ext_options), + ('faraday', '0.10.0', local_ext_options), + ('faraday_middleware', '0.10.1', local_ext_options), + ('highline', '1.7.8', local_ext_options), + ('net-http-pipeline', '1.0.1', local_ext_options), + ('net-http-persistent', '2.9.4', local_ext_options), + ('multi_json', '1.12.1', local_ext_options), + ('public_local_suffix', '2.0.4', local_ext_options), + ('addressable', '2.4.0', local_ext_options), + ('gh', '0.15.0', local_ext_options), + ('launchy', '2.4.3', local_ext_options), + ('ethon', '0.10.1', local_ext_options), + ('typhoeus', '0.6.9', local_ext_options), + ('websocket', '1.2.3', local_ext_options), + ('pusher-client', '0.6.2', local_ext_options), + ('diff-lcs', '1.2.5', local_ext_options), + ('rspec-support', '3.5.0', local_ext_options), + ('rspec-mocks', '3.5.0', local_ext_options), + ('rspec-expectations', '3.5.0', local_ext_options), + ('rspec-core', '3.5.4', local_ext_options), + ('rspec', '3.5.0', local_ext_options), + ('rack', '1.6.5', local_ext_options), + ('rack-protection', '1.5.3', local_ext_options), + ('tilt', '2.0.5', local_ext_options), + ('sinatra', '1.4.7', local_ext_options), + ('rack-test', '0.6.3', local_ext_options), + ('faraday', '0.12.0.1', local_ext_options), ] moduleclass = 'lang' diff --git a/r/Ruby/Ruby-2.4.2.eb b/r/Ruby/Ruby-2.4.2.eb index 094598c0..0def53ab 100644 --- a/r/Ruby/Ruby-2.4.2.eb +++ b/r/Ruby/Ruby-2.4.2.eb @@ -11,46 +11,46 @@ toolchain = SYSTEM sources = [SOURCELOWER_TAR_GZ] source_urls = ['http://cache.ruby-lang.org/pub/ruby/'] -ext_options = { +local_ext_options = { 'source_urls': ['http://rubygems.org/downloads/'], 'source_tmpl': '%(name)s-%(version)s.gem', } exts_list = [ - ('ffi', '1.9.14', ext_options), - ('childprocess', '0.5.9', ext_options), - ('json', '2.0.2', ext_options), - ('cabin', '0.9.0', ext_options), - ('backports', '3.6.8', ext_options), - ('arr-pm', '0.0.10', ext_options), - ('clamp', '1.1.1', ext_options), - ('multipart-post', '2.0.0', ext_options), - ('faraday', '0.10.0', ext_options), - ('faraday_middleware', '0.10.1', ext_options), - ('highline', '1.7.8', ext_options), - ('net-http-pipeline', '1.0.1', ext_options), - ('net-http-persistent', '2.9.4', ext_options), - ('multi_json', '1.12.1', ext_options), -# ('public_local_suffix', '2.0.4', ext_options), - ('addressable', '2.4.0', ext_options), - ('gh', '0.15.0', ext_options), - ('launchy', '2.4.3', ext_options), - ('ethon', '0.10.1', ext_options), - ('typhoeus', '0.6.9', ext_options), - ('websocket', '1.2.3', ext_options), - ('pusher-client', '0.6.2', ext_options), - ('diff-lcs', '1.2.5', ext_options), - ('rspec-support', '3.5.0', ext_options), - ('rspec-mocks', '3.5.0', ext_options), - ('rspec-expectations', '3.5.0', ext_options), - ('rspec-core', '3.5.4', ext_options), - ('rspec', '3.5.0', ext_options), - ('rack', '1.6.5', ext_options), - ('rack-protection', '1.5.3', ext_options), - ('tilt', '2.0.5', ext_options), -# ('sinatra', '2.0.4', ext_options), - ('rack-test', '0.6.3', ext_options), - ('faraday', '0.12.0.1', ext_options), + ('ffi', '1.9.14', local_ext_options), + ('childprocess', '0.5.9', local_ext_options), + ('json', '2.0.2', local_ext_options), + ('cabin', '0.9.0', local_ext_options), + ('backports', '3.6.8', local_ext_options), + ('arr-pm', '0.0.10', local_ext_options), + ('clamp', '1.1.1', local_ext_options), + ('multipart-post', '2.0.0', local_ext_options), + ('faraday', '0.10.0', local_ext_options), + ('faraday_middleware', '0.10.1', local_ext_options), + ('highline', '1.7.8', local_ext_options), + ('net-http-pipeline', '1.0.1', local_ext_options), + ('net-http-persistent', '2.9.4', local_ext_options), + ('multi_json', '1.12.1', local_ext_options), +# ('public_local_suffix', '2.0.4', local_ext_options), + ('addressable', '2.4.0', local_ext_options), + ('gh', '0.15.0', local_ext_options), + ('launchy', '2.4.3', local_ext_options), + ('ethon', '0.10.1', local_ext_options), + ('typhoeus', '0.6.9', local_ext_options), + ('websocket', '1.2.3', local_ext_options), + ('pusher-client', '0.6.2', local_ext_options), + ('diff-lcs', '1.2.5', local_ext_options), + ('rspec-support', '3.5.0', local_ext_options), + ('rspec-mocks', '3.5.0', local_ext_options), + ('rspec-expectations', '3.5.0', local_ext_options), + ('rspec-core', '3.5.4', local_ext_options), + ('rspec', '3.5.0', local_ext_options), + ('rack', '1.6.5', local_ext_options), + ('rack-protection', '1.5.3', local_ext_options), + ('tilt', '2.0.5', local_ext_options), +# ('sinatra', '2.0.4', local_ext_options), + ('rack-test', '0.6.3', local_ext_options), + ('faraday', '0.12.0.1', local_ext_options), ] moduleclass = 'lang' diff --git a/s/SQLite/SQLite-3.13.0.eb b/s/SQLite/SQLite-3.13.0.eb index 775b85e4..d05f4bef 100644 --- a/s/SQLite/SQLite-3.13.0.eb +++ b/s/SQLite/SQLite-3.13.0.eb @@ -9,11 +9,11 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = SYSTEM source_urls = ['http://www.sqlite.org/2016/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.14.1-GCCcore-4.9.3.eb b/s/SQLite/SQLite-3.14.1-GCCcore-4.9.3.eb index 515ab93f..c8b17f74 100644 --- a/s/SQLite/SQLite-3.14.1-GCCcore-4.9.3.eb +++ b/s/SQLite/SQLite-3.14.1-GCCcore-4.9.3.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'GCCcore', 'version': '4.9.3'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2016/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] builddependencies = [ ('binutils', '2.25'), diff --git a/s/SQLite/SQLite-3.17.0.eb b/s/SQLite/SQLite-3.17.0.eb index 97dbaef4..1812b2a3 100644 --- a/s/SQLite/SQLite-3.17.0.eb +++ b/s/SQLite/SQLite-3.17.0.eb @@ -21,13 +21,13 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = SYSTEM source_urls = ['http://www.sqlite.org/2017/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) sources = [ - 'sqlite-autoconf-%s.tar.gz' % version_str, - 'sqlite-amalgamation-%s.zip' % version_str, + 'sqlite-autoconf-%s.tar.gz' % local_version_str, + 'sqlite-amalgamation-%s.zip' % local_version_str, ] dependencies = [ diff --git a/s/SQLite/SQLite-3.18.2-GCC-6.3.0-2.27.eb b/s/SQLite/SQLite-3.18.2-GCC-6.3.0-2.27.eb index 07c9fd97..6a074812 100644 --- a/s/SQLite/SQLite-3.18.2-GCC-6.3.0-2.27.eb +++ b/s/SQLite/SQLite-3.18.2-GCC-6.3.0-2.27.eb @@ -21,13 +21,13 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'} source_urls = ['http://www.sqlite.org/2017/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) sources = [ - 'sqlite-autoconf-%s.tar.gz' % version_str, - # 'sqlite-amalgamation-%s.zip' % version_str, + 'sqlite-autoconf-%s.tar.gz' % local_version_str, + # 'sqlite-amalgamation-%s.zip' % local_version_str, ] dependencies = [ diff --git a/s/SQLite/SQLite-3.21.0.eb b/s/SQLite/SQLite-3.21.0.eb index c7db46b4..fb0d5c20 100644 --- a/s/SQLite/SQLite-3.21.0.eb +++ b/s/SQLite/SQLite-3.21.0.eb @@ -11,13 +11,13 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = SYSTEM source_urls = ['http://www.sqlite.org/2017/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) sources = [ - 'sqlite-autoconf-%s.tar.gz' % version_str, - 'sqlite-amalgamation-%s.zip' % version_str, + 'sqlite-autoconf-%s.tar.gz' % local_version_str, + 'sqlite-amalgamation-%s.zip' % local_version_str, ] dependencies = [ diff --git a/s/SQLite/SQLite-3.24.0.eb b/s/SQLite/SQLite-3.24.0.eb index 9e0facd5..2ceb125c 100644 --- a/s/SQLite/SQLite-3.24.0.eb +++ b/s/SQLite/SQLite-3.24.0.eb @@ -11,13 +11,13 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = SYSTEM source_urls = ['http://www.sqlite.org/2018/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) sources = [ - 'sqlite-autoconf-%s.tar.gz' % version_str, - 'sqlite-amalgamation-%s.zip' % version_str, + 'sqlite-autoconf-%s.tar.gz' % local_version_str, + 'sqlite-amalgamation-%s.zip' % local_version_str, ] dependencies = [ diff --git a/s/SQLite/SQLite-3.25.2-GCC-6.3.0-2.27.eb b/s/SQLite/SQLite-3.25.2-GCC-6.3.0-2.27.eb index 3127e37e..2d8c14c9 100644 --- a/s/SQLite/SQLite-3.25.2-GCC-6.3.0-2.27.eb +++ b/s/SQLite/SQLite-3.25.2-GCC-6.3.0-2.27.eb @@ -11,13 +11,13 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'} source_urls = ['http://www.sqlite.org/2018/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) sources = [ - 'sqlite-autoconf-%s.tar.gz' % version_str, - 'sqlite-amalgamation-%s.zip' % version_str, + 'sqlite-autoconf-%s.tar.gz' % local_version_str, + 'sqlite-amalgamation-%s.zip' % local_version_str, ] dependencies = [ diff --git a/s/SQLite/SQLite-3.27.1.eb b/s/SQLite/SQLite-3.27.1.eb index f2a63870..320796e7 100644 --- a/s/SQLite/SQLite-3.27.1.eb +++ b/s/SQLite/SQLite-3.27.1.eb @@ -11,13 +11,13 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = SYSTEM source_urls = ['http://www.sqlite.org/2019/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) sources = [ - 'sqlite-autoconf-%s.tar.gz' % version_str, - 'sqlite-amalgamation-%s.zip' % version_str, + 'sqlite-autoconf-%s.tar.gz' % local_version_str, + 'sqlite-amalgamation-%s.zip' % local_version_str, ] dependencies = [ diff --git a/s/SQLite/SQLite-3.27.2.eb b/s/SQLite/SQLite-3.27.2.eb index aff11e9d..fc04f4c6 100644 --- a/s/SQLite/SQLite-3.27.2.eb +++ b/s/SQLite/SQLite-3.27.2.eb @@ -11,13 +11,13 @@ description = 'SQLite: SQL Database Engine in a C Library' toolchain = SYSTEM source_urls = ['http://www.sqlite.org/2019/'] -version_minor_etc = version.split('.')[1:] -version_minor_etc += '0' * (3 - len(version_minor_etc)) -version_str = '%(version_major)s' + ''.join('%02d' % int(x) - for x in version_minor_etc) +local_version_minor_etc = version.split('.')[1:] +local_version_minor_etc += '0' * (3 - len(local_version_minor_etc)) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) + for x in local_version_minor_etc) sources = [ - 'sqlite-autoconf-%s.tar.gz' % version_str, - 'sqlite-amalgamation-%s.zip' % version_str, + 'sqlite-autoconf-%s.tar.gz' % local_version_str, + 'sqlite-amalgamation-%s.zip' % local_version_str, ] dependencies = [ diff --git a/s/SQLite/SQLite-3.8.10.2-GCC-4.9.3-2.25.eb b/s/SQLite/SQLite-3.8.10.2-GCC-4.9.3-2.25.eb index a0411ac1..d2e4cd8d 100644 --- a/s/SQLite/SQLite-3.8.10.2-GCC-4.9.3-2.25.eb +++ b/s/SQLite/SQLite-3.8.10.2-GCC-4.9.3-2.25.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'GCC', 'version': '4.9.3-2.25'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3', '', ('GCCcore', '4.9.3')), diff --git a/s/SQLite/SQLite-3.8.10.2-gimkl-2.11.5.eb b/s/SQLite/SQLite-3.8.10.2-gimkl-2.11.5.eb index 60f892f6..2a3a4535 100644 --- a/s/SQLite/SQLite-3.8.10.2-gimkl-2.11.5.eb +++ b/s/SQLite/SQLite-3.8.10.2-gimkl-2.11.5.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'gimkl', 'version': '2.11.5'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.8.10.2-goolf-1.4.10.eb b/s/SQLite/SQLite-3.8.10.2-goolf-1.4.10.eb index 2886a880..717593d0 100644 --- a/s/SQLite/SQLite-3.8.10.2-goolf-1.4.10.eb +++ b/s/SQLite/SQLite-3.8.10.2-goolf-1.4.10.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.8.10.2-goolf-1.7.20.eb b/s/SQLite/SQLite-3.8.10.2-goolf-1.7.20.eb index 5b382a08..298cc01e 100644 --- a/s/SQLite/SQLite-3.8.10.2-goolf-1.7.20.eb +++ b/s/SQLite/SQLite-3.8.10.2-goolf-1.7.20.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'goolf', 'version': '1.7.20'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.8.8.1-GNU-5.1.0-2.25.eb b/s/SQLite/SQLite-3.8.8.1-GNU-5.1.0-2.25.eb index 240a8f05..9d26bedd 100644 --- a/s/SQLite/SQLite-3.8.8.1-GNU-5.1.0-2.25.eb +++ b/s/SQLite/SQLite-3.8.8.1-GNU-5.1.0-2.25.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'GNU', 'version': '5.1.0-2.25'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.8.8.1-gompi-2015e.eb b/s/SQLite/SQLite-3.8.8.1-gompi-2015e.eb index 3ae34f7c..2c1e5062 100644 --- a/s/SQLite/SQLite-3.8.8.1-gompi-2015e.eb +++ b/s/SQLite/SQLite-3.8.8.1-gompi-2015e.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'gompi', 'version': '2015e'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.8.8.1-ictce-7.3.5.eb b/s/SQLite/SQLite-3.8.8.1-ictce-7.3.5.eb index aa6fe3a9..3d15d847 100644 --- a/s/SQLite/SQLite-3.8.8.1-ictce-7.3.5.eb +++ b/s/SQLite/SQLite-3.8.8.1-ictce-7.3.5.eb @@ -23,9 +23,9 @@ toolchain = {'name': 'ictce', 'version': '7.3.5'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.8.8.1.eb b/s/SQLite/SQLite-3.8.8.1.eb index f85649dc..9597677a 100644 --- a/s/SQLite/SQLite-3.8.8.1.eb +++ b/s/SQLite/SQLite-3.8.8.1.eb @@ -22,9 +22,9 @@ toolchain = SYSTEM # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%(version_major)s' + ''.join('%02d' % int(x) +local_version_str = '%(version_major)s' + ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] patches = ['enable_column_metadata.patch'] diff --git a/s/SQLite/SQLite-3.9.2-CrayGNU-2015.11.eb b/s/SQLite/SQLite-3.9.2-CrayGNU-2015.11.eb index 60e50b93..e2c10619 100644 --- a/s/SQLite/SQLite-3.9.2-CrayGNU-2015.11.eb +++ b/s/SQLite/SQLite-3.9.2-CrayGNU-2015.11.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'CrayGNU', 'version': '2015.11'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.9.2-CrayGNU-2016.03.eb b/s/SQLite/SQLite-3.9.2-CrayGNU-2016.03.eb index 3e5f221a..8bce1c40 100644 --- a/s/SQLite/SQLite-3.9.2-CrayGNU-2016.03.eb +++ b/s/SQLite/SQLite-3.9.2-CrayGNU-2016.03.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'CrayGNU', 'version': '2016.03'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.9.2-gimkl-2.11.5.eb b/s/SQLite/SQLite-3.9.2-gimkl-2.11.5.eb index 3d3d1309..725e8577 100644 --- a/s/SQLite/SQLite-3.9.2-gimkl-2.11.5.eb +++ b/s/SQLite/SQLite-3.9.2-gimkl-2.11.5.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'gimkl', 'version': '2.11.5'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.9.2-goolf-1.7.20.eb b/s/SQLite/SQLite-3.9.2-goolf-1.7.20.eb index 7aa28a41..59c75678 100644 --- a/s/SQLite/SQLite-3.9.2-goolf-1.7.20.eb +++ b/s/SQLite/SQLite-3.9.2-goolf-1.7.20.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'goolf', 'version': '1.7.20'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.9.2-iomkl-2016.07.eb b/s/SQLite/SQLite-3.9.2-iomkl-2016.07.eb index 44b0c996..f856b0b2 100644 --- a/s/SQLite/SQLite-3.9.2-iomkl-2016.07.eb +++ b/s/SQLite/SQLite-3.9.2-iomkl-2016.07.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'iomkl', 'version': '2016.07'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/SQLite/SQLite-3.9.2-iomkl-2016.09-GCC-4.9.3-2.25.eb b/s/SQLite/SQLite-3.9.2-iomkl-2016.09-GCC-4.9.3-2.25.eb index 6d916bea..55f6a3f5 100644 --- a/s/SQLite/SQLite-3.9.2-iomkl-2016.09-GCC-4.9.3-2.25.eb +++ b/s/SQLite/SQLite-3.9.2-iomkl-2016.09-GCC-4.9.3-2.25.eb @@ -22,9 +22,9 @@ toolchain = {'name': 'iomkl', 'version': '2016.09-GCC-4.9.3-2.25'} # eg. http://www.sqlite.org/2014/sqlite-autoconf-3080600.tar.gz source_urls = ['http://www.sqlite.org/2015/'] -version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) +local_version_str = '%%(version_major)s%s00' % ''.join('%02d' % int(x) for x in version.split('.')[1:]) -sources = ['sqlite-autoconf-%s.tar.gz' % version_str] +sources = ['sqlite-autoconf-%s.tar.gz' % local_version_str] dependencies = [ ('libreadline', '6.3'), diff --git a/s/Saxon-HE/Saxon-HE-9.7.0.4-Java-1.7.0_79.eb b/s/Saxon-HE/Saxon-HE-9.7.0.4-Java-1.7.0_79.eb index 69671cc6..34151b0e 100644 --- a/s/Saxon-HE/Saxon-HE-9.7.0.4-Java-1.7.0_79.eb +++ b/s/Saxon-HE/Saxon-HE-9.7.0.4-Java-1.7.0_79.eb @@ -16,16 +16,16 @@ source_urls = [ dependencies = [('Java', '1.7.0_79')] -jarfiles = [ +local_jarfiles = [ 'saxon%(version_major)she.jar', 'saxon%(version_major)s-test.jar', 'saxon%(version_major)s-xqj.jar'] sanity_check_paths = { - 'files': jarfiles, + 'files': local_jarfiles, 'dirs': [], } -modextrapaths = {'CLASSPATH': jarfiles} +modextrapaths = {'CLASSPATH': local_jarfiles} moduleclass = 'devel' diff --git a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-1.5.12-OpenBLAS-0.2.8-LAPACK-3.5.0.eb b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-1.5.12-OpenBLAS-0.2.8-LAPACK-3.5.0.eb index 24d561e9..0653d97d 100644 --- a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-1.5.12-OpenBLAS-0.2.8-LAPACK-3.5.0.eb +++ b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-1.5.12-OpenBLAS-0.2.8-LAPACK-3.5.0.eb @@ -13,11 +13,11 @@ sources = [SOURCELOWER_TGZ] local_blaslib = 'OpenBLAS' local_blasver = '0.2.8' -blaslocal_suff = '-LAPACK-3.5.0' +local_blaslocal_suff = '-LAPACK-3.5.0' -versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, blaslocal_suff) +versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, local_blaslocal_suff) -dependencies = [(local_blaslib, local_blasver, blaslocal_suff)] +dependencies = [(local_blaslib, local_blasver, local_blaslocal_suff)] # parallel build tends to fail, so disabling it parallel = 1 diff --git a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0.eb b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0.eb index bc8a999a..403a9f35 100644 --- a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0.eb +++ b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0.eb @@ -13,11 +13,11 @@ sources = [SOURCELOWER_TGZ] local_blaslib = 'OpenBLAS' local_blasver = '0.2.14' -blaslocal_suff = '-LAPACK-3.5.0' +local_blaslocal_suff = '-LAPACK-3.5.0' -versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, blaslocal_suff) +versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, local_blaslocal_suff) -dependencies = [(local_blaslib, local_blasver, blaslocal_suff, ('gompi', '2015e'))] +dependencies = [(local_blaslib, local_blasver, local_blaslocal_suff, ('gompi', '2015e'))] # parallel build tends to fail, so disabling it parallel = 1 diff --git a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0.eb b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0.eb index 6e644e85..7c8fee40 100644 --- a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0.eb +++ b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0.eb @@ -13,11 +13,11 @@ sources = [SOURCELOWER_TGZ] local_blaslib = 'OpenBLAS' local_blasver = '0.2.14' -blaslocal_suff = '-LAPACK-3.5.0' +local_blaslocal_suff = '-LAPACK-3.5.0' -versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, blaslocal_suff) +versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, local_blaslocal_suff) -dependencies = [(local_blaslib, local_blasver, blaslocal_suff, ('GNU', '4.9.3-2.25'))] +dependencies = [(local_blaslib, local_blasver, local_blaslocal_suff, ('GNU', '4.9.3-2.25'))] # parallel build tends to fail, so disabling it parallel = 1 diff --git a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0-GCC-5.1.0-binutils-2.25.eb b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0-GCC-5.1.0-binutils-2.25.eb index d4e137aa..c2f25dd6 100644 --- a/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0-GCC-5.1.0-binutils-2.25.eb +++ b/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0-GCC-5.1.0-binutils-2.25.eb @@ -13,9 +13,9 @@ sources = [SOURCELOWER_TGZ] local_blaslib = 'OpenBLAS' local_blasver = '0.2.15' -blaslocal_suff = '-LAPACK-3.6.0' +local_blaslocal_suff = '-LAPACK-3.6.0' -versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, blaslocal_suff) +versionsuffix = "-%s-%s%s" % (local_blaslib, local_blasver, local_blaslocal_suff) #dependencies = [('OpenBLAS', '0.2.15-GCC-5.1.0-local_binutils-2.25-LAPACK-3.6.0')] diff --git a/s/scikit-image/scikit-image-0.18.2-Python-3.6.1.eb b/s/scikit-image/scikit-image-0.18.2-Python-3.6.1.eb index 1ad0e103..a2cf8cf3 100644 --- a/s/scikit-image/scikit-image-0.18.2-Python-3.6.1.eb +++ b/s/scikit-image/scikit-image-0.18.2-Python-3.6.1.eb @@ -15,14 +15,14 @@ toolchain = SYSTEM source_urls = [PYPI_SOURCE] sources = [SOURCE_TAR_GZ] -freetype_ver = '2.6.5' +local_freetype_ver = '2.6.5' dependencies = [ ('Python', '3.6.1'), ('Qhull', '2015.2'), - ('matplotlib', '2.0.2', versionsuffix + '-freetype-%s' % freetype_ver), + ('matplotlib', '2.0.2', versionsuffix + '-freetype-%s' % local_freetype_ver), ('networkx', '1.11', versionsuffix), - ('Pillow', '4.2.1', versionsuffix + '-freetype-%s' % freetype_ver), + ('Pillow', '4.2.1', versionsuffix + '-freetype-%s' % local_freetype_ver), #('sPickle', '0.1.11', versionsuffix) ] diff --git a/t/Tensorflow/Tensorflow-1.1.0-CUDA-7.5.18-Python-3.6.1.eb b/t/Tensorflow/Tensorflow-1.1.0-CUDA-7.5.18-Python-3.6.1.eb index 12d6ce6b..d3d9b9d5 100644 --- a/t/Tensorflow/Tensorflow-1.1.0-CUDA-7.5.18-Python-3.6.1.eb +++ b/t/Tensorflow/Tensorflow-1.1.0-CUDA-7.5.18-Python-3.6.1.eb @@ -9,9 +9,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = SYSTEM -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ @@ -19,7 +19,7 @@ sources = [ ] dependencies = [ - ('Python', '%s.%s.1' % (pymaj, pymin)), + ('Python', '%s.%s.1' % (local_pymaj, local_pymin)), ('cuDNN', '5.1', '-CUDA-7.5.18'), ('GCC', '4.9.3', '-tf'), ] diff --git a/t/Tensorflow/Tensorflow-1.1.0-CUDA-8.0.44-Python-3.6.1.eb b/t/Tensorflow/Tensorflow-1.1.0-CUDA-8.0.44-Python-3.6.1.eb index caeb7b38..5ebaf491 100644 --- a/t/Tensorflow/Tensorflow-1.1.0-CUDA-8.0.44-Python-3.6.1.eb +++ b/t/Tensorflow/Tensorflow-1.1.0-CUDA-8.0.44-Python-3.6.1.eb @@ -9,9 +9,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = SYSTEM -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ @@ -19,7 +19,7 @@ sources = [ ] dependencies = [ - ('Python', '%s.%s.1' % (pymaj, pymin)), + ('Python', '%s.%s.1' % (local_pymaj, local_pymin)), ('cuDNN', '5.1', '-CUDA-8.0.44'), ('GCC', '4.9.3', '-tf'), ] diff --git a/t/Tensorflow/Tensorflow-1.1.0-Python-3.6.1.eb b/t/Tensorflow/Tensorflow-1.1.0-Python-3.6.1.eb index 624adffd..a59681fb 100644 --- a/t/Tensorflow/Tensorflow-1.1.0-Python-3.6.1.eb +++ b/t/Tensorflow/Tensorflow-1.1.0-Python-3.6.1.eb @@ -8,9 +8,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = SYSTEM -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ @@ -18,7 +18,7 @@ sources = [ ] dependencies = [ - ('Python', '%s.%s.1' % (pymaj, pymin)), + ('Python', '%s.%s.1' % (local_pymaj, local_pymin)), ('GCC', '4.9.3', '-tf'), ] diff --git a/t/Tensorflow/Tensorflow-1.2.0-GCC-7.1.0-2.28.eb b/t/Tensorflow/Tensorflow-1.2.0-GCC-7.1.0-2.28.eb index 74fa48f9..5eed9f5d 100644 --- a/t/Tensorflow/Tensorflow-1.2.0-GCC-7.1.0-2.28.eb +++ b/t/Tensorflow/Tensorflow-1.2.0-GCC-7.1.0-2.28.eb @@ -8,9 +8,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = {'name': 'GCC', 'version': '7.1.0-2.28'} -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ diff --git a/t/Tensorflow/Tensorflow-1.2.1-Python-3.6.1.eb b/t/Tensorflow/Tensorflow-1.2.1-Python-3.6.1.eb index b7cd4a66..6f0d28b5 100644 --- a/t/Tensorflow/Tensorflow-1.2.1-Python-3.6.1.eb +++ b/t/Tensorflow/Tensorflow-1.2.1-Python-3.6.1.eb @@ -8,9 +8,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = SYSTEM -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ @@ -18,7 +18,7 @@ sources = [ ] dependencies = [ - ('Python', '%s.%s.1' % (pymaj, pymin)), + ('Python', '%s.%s.1' % (local_pymaj, local_pymin)), ('GCC', '7.1.0-2.28'), ] diff --git a/t/Tensorflow/Tensorflow-1.6.0rc0-CUDA-9.0.176-Python-3.6.1.eb b/t/Tensorflow/Tensorflow-1.6.0rc0-CUDA-9.0.176-Python-3.6.1.eb index d826611e..80a3ed42 100644 --- a/t/Tensorflow/Tensorflow-1.6.0rc0-CUDA-9.0.176-Python-3.6.1.eb +++ b/t/Tensorflow/Tensorflow-1.6.0rc0-CUDA-9.0.176-Python-3.6.1.eb @@ -9,9 +9,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = SYSTEM -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ @@ -19,7 +19,7 @@ sources = [ ] dependencies = [ - ('Python', '%s.%s.1' % (pymaj, pymin)), + ('Python', '%s.%s.1' % (local_pymaj, local_pymin)), ('cuDNN', '7.0.5', '-CUDA-9.0.176'), ('GCC', '6.3.0-2.27'), ] diff --git a/t/Tensorflow/Tensorflow-1.6.0rc0-Python-3.6.1.eb b/t/Tensorflow/Tensorflow-1.6.0rc0-Python-3.6.1.eb index 3f193c5e..363895a9 100644 --- a/t/Tensorflow/Tensorflow-1.6.0rc0-Python-3.6.1.eb +++ b/t/Tensorflow/Tensorflow-1.6.0rc0-Python-3.6.1.eb @@ -8,9 +8,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = SYSTEM -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin #source_urls = ['https://pypi.python.org/packages/1f/38/c255432f18005362dd2459e3bff2b2411eb7d02ca09fa20ee1dd1311f69f/'] sources = [ @@ -18,7 +18,7 @@ sources = [ ] dependencies = [ - ('Python', '%s.%s.1' % (pymaj, pymin)), + ('Python', '%s.%s.1' % (local_pymaj, local_pymin)), ('GCC', '7.1.0-2.28'), ] diff --git a/t/Tensorflow/Tensorflow-Python-3.6.1.eb b/t/Tensorflow/Tensorflow-Python-3.6.1.eb index af3dd913..0bd35452 100644 --- a/t/Tensorflow/Tensorflow-Python-3.6.1.eb +++ b/t/Tensorflow/Tensorflow-Python-3.6.1.eb @@ -8,9 +8,9 @@ description = "An open-source software library for Machine Intelligence" toolchain = SYSTEM -pymaj = '3' -pymin = '6' -pymajmin = pymaj + pymin +local_pymaj = '3' +local_pymin = '6' +local_pymajmin = local_pymaj + local_pymin sources = [ 'tensorflow-%(version)src1-cp36-cp36m-linux_x86_64.whl', diff --git a/t/Trimmomatic/Trimmomatic-0.32-Java-1.7.0_80.eb b/t/Trimmomatic/Trimmomatic-0.32-Java-1.7.0_80.eb index d8bfbccf..6e8f3c1c 100644 --- a/t/Trimmomatic/Trimmomatic-0.32-Java-1.7.0_80.eb +++ b/t/Trimmomatic/Trimmomatic-0.32-Java-1.7.0_80.eb @@ -19,12 +19,12 @@ source_urls = [ 'http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/'] sources = [SOURCE_ZIP] -java = 'Java' -javaver = '1.7.0_80' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_80' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute Trimmomatic run: java -jar \\$EBROOTTRIMMOMATIC/trimmomatic-%(version)s.jar""" +modloadmsg = """To execute Trimmomatic run: local_java -jar \\$EBROOTTRIMMOMATIC/trimmomatic-%(version)s.jar""" sanity_check_paths = { 'files': ["trimmomatic-%(version)s.jar"], diff --git a/t/Trimmomatic/Trimmomatic-0.35-Java-1.7.0_79.eb b/t/Trimmomatic/Trimmomatic-0.35-Java-1.7.0_79.eb index 0292d179..31472604 100644 --- a/t/Trimmomatic/Trimmomatic-0.35-Java-1.7.0_79.eb +++ b/t/Trimmomatic/Trimmomatic-0.35-Java-1.7.0_79.eb @@ -19,12 +19,12 @@ source_urls = [ 'http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/'] sources = [SOURCE_ZIP] -java = 'Java' -javaver = '1.7.0_79' -versionsuffix = '-%s-%s' % (java, javaver) -dependencies = [(java, javaver)] +local_java = 'Java' +local_javaver = '1.7.0_79' +versionsuffix = '-%s-%s' % (local_java, local_javaver) +dependencies = [(local_java, local_javaver)] -modloadmsg = """To execute Trimmomatic run: java -jar \\$EBROOTTRIMMOMATIC/trimmomatic-%(version)s.jar""" +modloadmsg = """To execute Trimmomatic run: local_java -jar \\$EBROOTTRIMMOMATIC/trimmomatic-%(version)s.jar""" sanity_check_paths = { 'files': ["trimmomatic-%(version)s.jar"], diff --git a/t/Trinity/Trinity-2012-10-05-goolf-1.4.10.eb b/t/Trinity/Trinity-2012-10-05-goolf-1.4.10.eb index a856e66f..d4a466c9 100644 --- a/t/Trinity/Trinity-2012-10-05-goolf-1.4.10.eb +++ b/t/Trinity/Trinity-2012-10-05-goolf-1.4.10.eb @@ -21,12 +21,12 @@ patches = [ 'trinity_jellyfish-GCC-4.7.patch', ] -java = 'Java' -javaver = '1.7.0_10' +local_java = 'Java' +local_javaver = '1.7.0_10' dependencies = [ - (java, javaver, '', True), - ('ant', '1.8.4', '-%s-%s' % (java, javaver), True), + (local_java, local_javaver, '', True), + ('ant', '1.8.4', '-%s-%s' % (local_java, local_javaver), True), ('ncurses', '5.9'), ('zlib', '1.2.7'), ] diff --git a/t/tecplot360ex/tecplot360ex-linux64.eb b/t/tecplot360ex/tecplot360ex-linux64.eb index c13461ed..06229cd8 100644 --- a/t/tecplot360ex/tecplot360ex-linux64.eb +++ b/t/tecplot360ex/tecplot360ex-linux64.eb @@ -12,14 +12,14 @@ description = """ toolchain = SYSTEM # fi. http://www.tecplot.com/my/product-releases/ -installername = '%(name)s_%(version)s.sh' -sources = [installername] +local_installername = '%(name)s_%(version)s.sh' +sources = [local_installername] sanity_check_paths = { 'files': ['bin/tec360'], 'dirs': [] } install_cmd = 'chmod +x %s && ./%s --skip-license --prefix=%%(installdir)s' % ( - installername, installername) + local_installername, local_installername) moduleclass = 'vis' diff --git a/u/USEARCH/USEARCH-5.2.236-i86linux32.eb b/u/USEARCH/USEARCH-5.2.236-i86linux32.eb index 512c4a98..76bb6405 100644 --- a/u/USEARCH/USEARCH-5.2.236-i86linux32.eb +++ b/u/USEARCH/USEARCH-5.2.236-i86linux32.eb @@ -11,10 +11,10 @@ description = """USEARCH is a unique sequence analysis tool which offers search toolchain = SYSTEM # download via http://www.drive5.com/usearch/download.html -usearch_bin = 'usearch%s_%s' % (version, versionsuffix[1:]) -sources = [usearch_bin] +local_usearch_bin = 'usearch%s_%s' % (version, versionsuffix[1:]) +sources = [local_usearch_bin] -install_cmd = "mkdir -p %%(installdir)s/bin && mv %s %%(installdir)s/bin/%%(namelower)s && " % usearch_bin +install_cmd = "mkdir -p %%(installdir)s/bin && mv %s %%(installdir)s/bin/%%(namelower)s && " % local_usearch_bin install_cmd += "chmod a+rx %(installdir)s/bin/%(namelower)s" modloadmsg = """USEARCH (32-bit) is licensed software but diff --git a/u/USEARCH/USEARCH-6.1.544-i86linux32.eb b/u/USEARCH/USEARCH-6.1.544-i86linux32.eb index a25608ae..c935d276 100644 --- a/u/USEARCH/USEARCH-6.1.544-i86linux32.eb +++ b/u/USEARCH/USEARCH-6.1.544-i86linux32.eb @@ -11,10 +11,10 @@ description = """USEARCH is a unique sequence analysis tool which offers search toolchain = SYSTEM # download via http://www.drive5.com/usearch/download.html -usearch_bin = 'usearch%s_%s' % (version, versionsuffix[1:]) -sources = [usearch_bin] +local_usearch_bin = 'usearch%s_%s' % (version, versionsuffix[1:]) +sources = [local_usearch_bin] -install_cmd = "mkdir -p %%(installdir)s/bin && mv %s %%(installdir)s/bin/%%(namelower)s && " % usearch_bin +install_cmd = "mkdir -p %%(installdir)s/bin && mv %s %%(installdir)s/bin/%%(namelower)s && " % local_usearch_bin install_cmd += "chmod a+rx %(installdir)s/bin/%(namelower)s" modloadmsg = """USEARCH (32-bit) is licensed software but diff --git a/v/Valgrind/Valgrind-3.16.1-intel-2020b.eb b/v/Valgrind/Valgrind-3.16.1-intel-2020b.eb index 5f19c115..3c841aed 100644 --- a/v/Valgrind/Valgrind-3.16.1-intel-2020b.eb +++ b/v/Valgrind/Valgrind-3.16.1-intel-2020b.eb @@ -17,13 +17,13 @@ sources = [SOURCELOWER_TAR_BZ2] configopts = ' --with-mpicc="$MPICC"' -binaries = [ +local_binaries = [ 'callgrind_annotate', 'callgrind_control', 'cg_annotate', 'cg_diff', 'cg_merge', 'ms_print', 'valgrind', 'valgrind-listener', 'vgdb' ] sanity_check_paths = { - 'files': ['bin/%s' % x for x in binaries], + 'files': ['bin/%s' % x for x in local_binaries], 'dirs': [] } diff --git a/v/Vampir/Vampir-10.0.2.eb b/v/Vampir/Vampir-10.0.2.eb index 01624684..aee65148 100644 --- a/v/Vampir/Vampir-10.0.2.eb +++ b/v/Vampir/Vampir-10.0.2.eb @@ -5,7 +5,7 @@ easyblock = 'Binary' name = 'Vampir' version = '10.0.2' -variant = 'linux-x86_64' +local_variant = 'linux-x86_64' homepage = 'http://www.vampir.eu' description = """The Vampir software tool provides an easy-to-use framework that enables @@ -15,7 +15,7 @@ description = """The Vampir software tool provides an easy-to-use framework that toolchain = SYSTEM -sources = ['vampir-%s-%s-setup.sh' % (version, variant)] +sources = ['vampir-%s-%s-setup.sh' % (version, local_variant)] checksums = [ 'b7a66118ae515a7d6ac807085cf19ddb', # vampir-10.0.2-linux-x86_64-setup.sh diff --git a/v/Vampir/Vampir-8.5.0.eb b/v/Vampir/Vampir-8.5.0.eb index a6148c62..f1004115 100644 --- a/v/Vampir/Vampir-8.5.0.eb +++ b/v/Vampir/Vampir-8.5.0.eb @@ -14,7 +14,7 @@ easyblock = 'Binary' name = 'Vampir' version = '8.5.0' -variant = 'linux-x86_64' +local_variant = 'linux-x86_64' homepage = 'http://www.vampir.eu' description = """The Vampir software tool provides an easy-to-use framework that enables @@ -24,7 +24,7 @@ description = """The Vampir software tool provides an easy-to-use framework that toolchain = SYSTEM -sources = ['vampir-%s-%s-setup.bin' % (version, variant)] +sources = ['vampir-%s-%s-setup.bin' % (version, local_variant)] checksums = [ '6d949e37a095a70a6fc61fa2eeae9389', # vampir-8.5.0-linux-x86_64-setup.bin diff --git a/v/Vampir/Vampir-9.0.0.eb b/v/Vampir/Vampir-9.0.0.eb index 615f3753..b3368a61 100644 --- a/v/Vampir/Vampir-9.0.0.eb +++ b/v/Vampir/Vampir-9.0.0.eb @@ -14,7 +14,7 @@ easyblock = 'Binary' name = 'Vampir' version = '9.0.0' -variant = 'linux-x86_64' +local_variant = 'linux-x86_64' homepage = 'http://www.vampir.eu' description = """The Vampir software tool provides an easy-to-use framework that enables @@ -24,7 +24,7 @@ description = """The Vampir software tool provides an easy-to-use framework that toolchain = SYSTEM -sources = ['vampir-%s-%s-setup.bin' % (version, variant)] +sources = ['vampir-%s-%s-setup.bin' % (version, local_variant)] checksums = [ 'a1de704599994c07d4e5cacf7c3ddaf6', # vampir-9.0.0-linux-x86_64-setup.bin diff --git a/v/Vampir/Vampir-9.6.1.eb b/v/Vampir/Vampir-9.6.1.eb index cbf4ef80..c5c7cd38 100644 --- a/v/Vampir/Vampir-9.6.1.eb +++ b/v/Vampir/Vampir-9.6.1.eb @@ -5,7 +5,7 @@ easyblock = 'Binary' name = 'Vampir' version = '9.6.1' -variant = 'linux-x86_64' +local_variant = 'linux-x86_64' homepage = 'http://www.vampir.eu' description = """The Vampir software tool provides an easy-to-use framework that enables @@ -15,7 +15,7 @@ description = """The Vampir software tool provides an easy-to-use framework that toolchain = SYSTEM -sources = ['vampir-%s-%s-setup.bin' % (version, variant)] +sources = ['vampir-%s-%s-setup.bin' % (version, local_variant)] checksums = [ '9aa16e23aef4d9798b2238b76aa6cc31', # vampir-9.6.1-linux-x86_64-setup.bin diff --git a/v/Vampir/Vampir-9.9.0.eb b/v/Vampir/Vampir-9.9.0.eb index bee2c2bf..b66b6163 100644 --- a/v/Vampir/Vampir-9.9.0.eb +++ b/v/Vampir/Vampir-9.9.0.eb @@ -5,7 +5,7 @@ easyblock = 'Binary' name = 'Vampir' version = '9.9.0' -variant = 'linux-x86_64' +local_variant = 'linux-x86_64' homepage = 'http://www.vampir.eu' description = """The Vampir software tool provides an easy-to-use framework that enables @@ -15,7 +15,7 @@ description = """The Vampir software tool provides an easy-to-use framework that toolchain = SYSTEM -sources = ['vampir-%s-%s-setup.sh' % (version, variant)] +sources = ['vampir-%s-%s-setup.sh' % (version, local_variant)] checksums = [ '107ab03b1b2142ff8967e17f7eecc80f', # vampir-9.9.0-linux-x86_64-setup.sh diff --git a/w/WEKA/WEKA-3.6.12-Java-1.7.0_80.eb b/w/WEKA/WEKA-3.6.12-Java-1.7.0_80.eb index 997b6de7..62e35e4b 100644 --- a/w/WEKA/WEKA-3.6.12-Java-1.7.0_80.eb +++ b/w/WEKA/WEKA-3.6.12-Java-1.7.0_80.eb @@ -20,11 +20,11 @@ toolchain = SYSTEM source_urls = ['http://prdownloads.sourceforge.net/weka/'] sources = ['%s-%s.zip' % (name.lower(), version.replace('.', '-'))] -java = 'Java' -javaver = '1.7.0_80' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_80' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] sanity_check_paths = { 'files': ["weka.jar"], @@ -35,6 +35,6 @@ modextravars = { 'WEKAINSTALL': '$root', } -modloadmsg = " execute WEKA: java -jar \\$EBROOTWEKA/weka.jar " +modloadmsg = " execute WEKA: local_java -jar \\$EBROOTWEKA/weka.jar " moduleclass = 'bio' diff --git a/w/WEKA/WEKA-3.7.0-Java-1.7.0_80.eb b/w/WEKA/WEKA-3.7.0-Java-1.7.0_80.eb index 2a98108b..25e3c29e 100644 --- a/w/WEKA/WEKA-3.7.0-Java-1.7.0_80.eb +++ b/w/WEKA/WEKA-3.7.0-Java-1.7.0_80.eb @@ -20,11 +20,11 @@ toolchain = SYSTEM source_urls = ['http://prdownloads.sourceforge.net/weka/'] sources = ['%s-%s.zip' % (name.lower(), version.replace('.', '-'))] -java = 'Java' -javaver = '1.7.0_80' -versionsuffix = '-%s-%s' % (java, javaver) +local_java = 'Java' +local_javaver = '1.7.0_80' +versionsuffix = '-%s-%s' % (local_java, local_javaver) -dependencies = [(java, javaver)] +dependencies = [(local_java, local_javaver)] sanity_check_paths = { 'files': ["weka.jar"], @@ -35,6 +35,6 @@ modextravars = { 'WEKAINSTALL': '$root', } -modloadmsg = " execute WEKA: java -jar \\$EBROOTWEKA/weka.jar " +modloadmsg = " execute WEKA: local_java -jar \\$EBROOTWEKA/weka.jar " moduleclass = 'bio' diff --git a/x/X11/X11-20160819-test.eb b/x/X11/X11-20160819-test.eb index 0e11615f..25f44bef 100644 --- a/x/X11/X11-20160819-test.eb +++ b/x/X11/X11-20160819-test.eb @@ -30,7 +30,7 @@ dependencies = [ default_easyblock = 'ConfigureMake' -common_specs = { +local_common_specs = { 'sources': [SOURCE_TAR_GZ], 'start_dir': '%(name)s-%(version)s', } @@ -39,79 +39,79 @@ local_components = [ 'sources': ['util-macros-%(version)s.tar.gz'], 'start_dir': 'util-macros-%(version)s', }), - ('xf86-video-dummy', '0.3.5', common_specs), - ('libpthread-stubs', '0.3', common_specs), - ('bigreqsproto', '1.1.2', common_specs), - ('local_compositeproto', '0.4.2', common_specs), - ('damageproto', '1.2.1', common_specs), - ('dmxproto', '2.3.1', common_specs), - ('dri2proto', '2.8', common_specs), - ('dri3proto', '1.0', common_specs), - ('fixesproto', '5.0', common_specs), - ('fontsproto', '2.1.3', common_specs), - ('glproto', '1.4.17', common_specs), - ('inputproto', '2.3.1', common_specs), - ('kbproto', '1.0.7', common_specs), - ('presentproto', '1.0', common_specs), - ('randrproto', '1.5.0', common_specs), - ('recordproto', '1.14.2', common_specs), - ('renderproto', '0.11', common_specs), - ('resourceproto', '1.2.0', common_specs), - ('scrnsaverproto', '1.2.2', common_specs), - ('videoproto', '2.3.3', common_specs), - ('xcmiscproto', '1.2.2', common_specs), - ('xextproto', '7.3.0', common_specs), - ('xf86bigfontproto', '1.2.0', common_specs), - ('xf86dgaproto', '2.1', common_specs), - ('xf86driproto', '2.1.1', common_specs), - ('xf86vidmodeproto', '2.3.1', common_specs), - ('xineramaproto', '1.2.1', common_specs), - ('xproto', '7.0.28', common_specs), - ('libXau', '1.0.8', common_specs), - ('libXdmcp', '1.1.2', common_specs), - ('xcb-proto', '1.11', common_specs), - ('libxcb', '1.11.1', common_specs), - ('xtrans', '1.3.5', common_specs), + ('xf86-video-dummy', '0.3.5', local_common_specs), + ('libpthread-stubs', '0.3', local_common_specs), + ('bigreqsproto', '1.1.2', local_common_specs), + ('local_compositeproto', '0.4.2', local_common_specs), + ('damageproto', '1.2.1', local_common_specs), + ('dmxproto', '2.3.1', local_common_specs), + ('dri2proto', '2.8', local_common_specs), + ('dri3proto', '1.0', local_common_specs), + ('fixesproto', '5.0', local_common_specs), + ('fontsproto', '2.1.3', local_common_specs), + ('glproto', '1.4.17', local_common_specs), + ('inputproto', '2.3.1', local_common_specs), + ('kbproto', '1.0.7', local_common_specs), + ('presentproto', '1.0', local_common_specs), + ('randrproto', '1.5.0', local_common_specs), + ('recordproto', '1.14.2', local_common_specs), + ('renderproto', '0.11', local_common_specs), + ('resourceproto', '1.2.0', local_common_specs), + ('scrnsaverproto', '1.2.2', local_common_specs), + ('videoproto', '2.3.3', local_common_specs), + ('xcmiscproto', '1.2.2', local_common_specs), + ('xextproto', '7.3.0', local_common_specs), + ('xf86bigfontproto', '1.2.0', local_common_specs), + ('xf86dgaproto', '2.1', local_common_specs), + ('xf86driproto', '2.1.1', local_common_specs), + ('xf86vidmodeproto', '2.3.1', local_common_specs), + ('xineramaproto', '1.2.1', local_common_specs), + ('xproto', '7.0.28', local_common_specs), + ('libXau', '1.0.8', local_common_specs), + ('libXdmcp', '1.1.2', local_common_specs), + ('xcb-proto', '1.11', local_common_specs), + ('libxcb', '1.11.1', local_common_specs), + ('xtrans', '1.3.5', local_common_specs), ('libxkbcommon', '0.6.1', { 'sources': ['libxkbcommon-%(version)s.tar.xz'], 'start_dir': 'libxkbcommon-%(version)s', }), - ('libX11', '1.6.3', common_specs), - ('libXext', '1.3.3', common_specs), - ('libFS', '1.0.7', common_specs), - ('libICE', '1.0.9', common_specs), - ('libSM', '1.2.2', common_specs), - ('libXScrnSaver', '1.2.2', common_specs), - ('libXt', '1.1.5', common_specs), - ('libXmu', '1.1.2', common_specs), - ('libXpm', '3.5.11', common_specs), - ('libXaw', '1.0.13', common_specs), - ('libXfixes', '5.0.2', common_specs), - ('libXlocal_composite', '0.4.4', common_specs), - ('libXrender', '0.9.9', common_specs), - ('libXcursor', '1.1.14', common_specs), - ('libXdamage', '1.1.4', common_specs), - ('libfontenc', '1.1.3', common_specs), - ('libXfont', '1.5.1', common_specs), - ('libXi', '1.7.6', common_specs), - ('libXinerama', '1.1.3', common_specs), - ('libXrandr', '1.5.0', common_specs), - ('libXres', '1.0.7', common_specs), - ('libXtst', '1.2.2', common_specs), - ('libXv', '1.0.10', common_specs), - ('libXvMC', '1.0.9', common_specs), - ('libXxf86dga', '1.1.4', common_specs), - ('libXxf86vm', '1.1.4', common_specs), - ('libdmx', '1.1.3', common_specs), - ('libpciaccess', '0.13.4', common_specs), - ('libxkbfile', '1.0.9', common_specs), - ('libxshmfence', '1.2', common_specs), - ('xcb-util', '0.4.0', common_specs), - ('xcb-util-image', '0.4.0', common_specs), - ('xcb-util-keysyms', '0.4.0', common_specs), - ('xcb-util-renderutil', '0.3.9', common_specs), - ('xcb-util-wm', '0.4.1', common_specs), - ('xcb-util-cursor', '0.1.3', common_specs), + ('libX11', '1.6.3', local_common_specs), + ('libXext', '1.3.3', local_common_specs), + ('libFS', '1.0.7', local_common_specs), + ('libICE', '1.0.9', local_common_specs), + ('libSM', '1.2.2', local_common_specs), + ('libXScrnSaver', '1.2.2', local_common_specs), + ('libXt', '1.1.5', local_common_specs), + ('libXmu', '1.1.2', local_common_specs), + ('libXpm', '3.5.11', local_common_specs), + ('libXaw', '1.0.13', local_common_specs), + ('libXfixes', '5.0.2', local_common_specs), + ('libXlocal_composite', '0.4.4', local_common_specs), + ('libXrender', '0.9.9', local_common_specs), + ('libXcursor', '1.1.14', local_common_specs), + ('libXdamage', '1.1.4', local_common_specs), + ('libfontenc', '1.1.3', local_common_specs), + ('libXfont', '1.5.1', local_common_specs), + ('libXi', '1.7.6', local_common_specs), + ('libXinerama', '1.1.3', local_common_specs), + ('libXrandr', '1.5.0', local_common_specs), + ('libXres', '1.0.7', local_common_specs), + ('libXtst', '1.2.2', local_common_specs), + ('libXv', '1.0.10', local_common_specs), + ('libXvMC', '1.0.9', local_common_specs), + ('libXxf86dga', '1.1.4', local_common_specs), + ('libXxf86vm', '1.1.4', local_common_specs), + ('libdmx', '1.1.3', local_common_specs), + ('libpciaccess', '0.13.4', local_common_specs), + ('libxkbfile', '1.0.9', local_common_specs), + ('libxshmfence', '1.2', local_common_specs), + ('xcb-util', '0.4.0', local_common_specs), + ('xcb-util-image', '0.4.0', local_common_specs), + ('xcb-util-keysyms', '0.4.0', local_common_specs), + ('xcb-util-renderutil', '0.3.9', local_common_specs), + ('xcb-util-wm', '0.4.1', local_common_specs), + ('xcb-util-cursor', '0.1.3', local_common_specs), ] # Python is required for xcb-proto @@ -122,7 +122,7 @@ preconfigopts = "if [ ! -f configure ]; then ./autogen.sh; fi && " # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True modluafooter = 'add_property("state","testing")' diff --git a/x/X11/X11-20160819.eb b/x/X11/X11-20160819.eb index f88bdc02..5278bc9e 100644 --- a/x/X11/X11-20160819.eb +++ b/x/X11/X11-20160819.eb @@ -29,7 +29,7 @@ dependencies = [ default_easyblock = 'ConfigureMake' -common_specs = { +local_common_specs = { 'sources': [SOURCE_TAR_GZ], 'start_dir': '%(name)s-%(version)s', } @@ -38,78 +38,78 @@ local_components = [ 'sources': ['util-macros-%(version)s.tar.gz'], 'start_dir': 'util-macros-%(version)s', }), - ('libpthread-stubs', '0.3', common_specs), - ('bigreqsproto', '1.1.2', common_specs), - ('local_compositeproto', '0.4.2', common_specs), - ('damageproto', '1.2.1', common_specs), - ('dmxproto', '2.3.1', common_specs), - ('dri2proto', '2.8', common_specs), - ('dri3proto', '1.0', common_specs), - ('fixesproto', '5.0', common_specs), - ('fontsproto', '2.1.3', common_specs), - ('glproto', '1.4.17', common_specs), - ('inputproto', '2.3.1', common_specs), - ('kbproto', '1.0.7', common_specs), - ('presentproto', '1.0', common_specs), - ('randrproto', '1.5.0', common_specs), - ('recordproto', '1.14.2', common_specs), - ('renderproto', '0.11', common_specs), - ('resourceproto', '1.2.0', common_specs), - ('scrnsaverproto', '1.2.2', common_specs), - ('videoproto', '2.3.3', common_specs), - ('xcmiscproto', '1.2.2', common_specs), - ('xextproto', '7.3.0', common_specs), - ('xf86bigfontproto', '1.2.0', common_specs), - ('xf86dgaproto', '2.1', common_specs), - ('xf86driproto', '2.1.1', common_specs), - ('xf86vidmodeproto', '2.3.1', common_specs), - ('xineramaproto', '1.2.1', common_specs), - ('xproto', '7.0.28', common_specs), - ('libXau', '1.0.8', common_specs), - ('libXdmcp', '1.1.2', common_specs), - ('xcb-proto', '1.11', common_specs), - ('libxcb', '1.11.1', common_specs), - ('xtrans', '1.3.5', common_specs), + ('libpthread-stubs', '0.3', local_common_specs), + ('bigreqsproto', '1.1.2', local_common_specs), + ('local_compositeproto', '0.4.2', local_common_specs), + ('damageproto', '1.2.1', local_common_specs), + ('dmxproto', '2.3.1', local_common_specs), + ('dri2proto', '2.8', local_common_specs), + ('dri3proto', '1.0', local_common_specs), + ('fixesproto', '5.0', local_common_specs), + ('fontsproto', '2.1.3', local_common_specs), + ('glproto', '1.4.17', local_common_specs), + ('inputproto', '2.3.1', local_common_specs), + ('kbproto', '1.0.7', local_common_specs), + ('presentproto', '1.0', local_common_specs), + ('randrproto', '1.5.0', local_common_specs), + ('recordproto', '1.14.2', local_common_specs), + ('renderproto', '0.11', local_common_specs), + ('resourceproto', '1.2.0', local_common_specs), + ('scrnsaverproto', '1.2.2', local_common_specs), + ('videoproto', '2.3.3', local_common_specs), + ('xcmiscproto', '1.2.2', local_common_specs), + ('xextproto', '7.3.0', local_common_specs), + ('xf86bigfontproto', '1.2.0', local_common_specs), + ('xf86dgaproto', '2.1', local_common_specs), + ('xf86driproto', '2.1.1', local_common_specs), + ('xf86vidmodeproto', '2.3.1', local_common_specs), + ('xineramaproto', '1.2.1', local_common_specs), + ('xproto', '7.0.28', local_common_specs), + ('libXau', '1.0.8', local_common_specs), + ('libXdmcp', '1.1.2', local_common_specs), + ('xcb-proto', '1.11', local_common_specs), + ('libxcb', '1.11.1', local_common_specs), + ('xtrans', '1.3.5', local_common_specs), ('libxkbcommon', '0.6.1', { 'sources': ['libxkbcommon-%(version)s.tar.xz'], 'start_dir': 'libxkbcommon-%(version)s', }), - ('libX11', '1.6.3', common_specs), - ('libXext', '1.3.3', common_specs), - ('libFS', '1.0.7', common_specs), - ('libICE', '1.0.9', common_specs), - ('libSM', '1.2.2', common_specs), - ('libXScrnSaver', '1.2.2', common_specs), - ('libXt', '1.1.5', common_specs), - ('libXmu', '1.1.2', common_specs), - ('libXpm', '3.5.11', common_specs), - ('libXaw', '1.0.13', common_specs), - ('libXfixes', '5.0.2', common_specs), - ('libXlocal_composite', '0.4.4', common_specs), - ('libXrender', '0.9.9', common_specs), - ('libXcursor', '1.1.14', common_specs), - ('libXdamage', '1.1.4', common_specs), - ('libfontenc', '1.1.3', common_specs), - ('libXfont', '1.5.1', common_specs), - ('libXi', '1.7.6', common_specs), - ('libXinerama', '1.1.3', common_specs), - ('libXrandr', '1.5.0', common_specs), - ('libXres', '1.0.7', common_specs), - ('libXtst', '1.2.2', common_specs), - ('libXv', '1.0.10', common_specs), - ('libXvMC', '1.0.9', common_specs), - ('libXxf86dga', '1.1.4', common_specs), - ('libXxf86vm', '1.1.4', common_specs), - ('libdmx', '1.1.3', common_specs), - ('libpciaccess', '0.13.4', common_specs), - ('libxkbfile', '1.0.9', common_specs), - ('libxshmfence', '1.2', common_specs), - ('xcb-util', '0.4.0', common_specs), - ('xcb-util-image', '0.4.0', common_specs), - ('xcb-util-keysyms', '0.4.0', common_specs), - ('xcb-util-renderutil', '0.3.9', common_specs), - ('xcb-util-wm', '0.4.1', common_specs), - ('xcb-util-cursor', '0.1.3', common_specs), + ('libX11', '1.6.3', local_common_specs), + ('libXext', '1.3.3', local_common_specs), + ('libFS', '1.0.7', local_common_specs), + ('libICE', '1.0.9', local_common_specs), + ('libSM', '1.2.2', local_common_specs), + ('libXScrnSaver', '1.2.2', local_common_specs), + ('libXt', '1.1.5', local_common_specs), + ('libXmu', '1.1.2', local_common_specs), + ('libXpm', '3.5.11', local_common_specs), + ('libXaw', '1.0.13', local_common_specs), + ('libXfixes', '5.0.2', local_common_specs), + ('libXlocal_composite', '0.4.4', local_common_specs), + ('libXrender', '0.9.9', local_common_specs), + ('libXcursor', '1.1.14', local_common_specs), + ('libXdamage', '1.1.4', local_common_specs), + ('libfontenc', '1.1.3', local_common_specs), + ('libXfont', '1.5.1', local_common_specs), + ('libXi', '1.7.6', local_common_specs), + ('libXinerama', '1.1.3', local_common_specs), + ('libXrandr', '1.5.0', local_common_specs), + ('libXres', '1.0.7', local_common_specs), + ('libXtst', '1.2.2', local_common_specs), + ('libXv', '1.0.10', local_common_specs), + ('libXvMC', '1.0.9', local_common_specs), + ('libXxf86dga', '1.1.4', local_common_specs), + ('libXxf86vm', '1.1.4', local_common_specs), + ('libdmx', '1.1.3', local_common_specs), + ('libpciaccess', '0.13.4', local_common_specs), + ('libxkbfile', '1.0.9', local_common_specs), + ('libxshmfence', '1.2', local_common_specs), + ('xcb-util', '0.4.0', local_common_specs), + ('xcb-util-image', '0.4.0', local_common_specs), + ('xcb-util-keysyms', '0.4.0', local_common_specs), + ('xcb-util-renderutil', '0.3.9', local_common_specs), + ('xcb-util-wm', '0.4.1', local_common_specs), + ('xcb-util-cursor', '0.1.3', local_common_specs), ] # Python is required for xcb-proto @@ -120,7 +120,7 @@ preconfigopts = "if [ ! -f configure ]; then ./autogen.sh; fi && " # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [ diff --git a/x/X11/X11-20170314-test.eb b/x/X11/X11-20170314-test.eb index 372f9a35..3dd0a494 100644 --- a/x/X11/X11-20170314-test.eb +++ b/x/X11/X11-20170314-test.eb @@ -41,13 +41,13 @@ builddependencies = [ default_easyblock = 'ConfigureMake' -common_specs = { +local_common_specs = { 'sources': [SOURCE_TAR_GZ], 'start_dir': '%(name)s-%(version)s', 'parallel': '16', } -server_specs = { +local_server_specs = { 'sources': [SOURCE_TAR_GZ], 'start_dir': '%(name)s-%(version)s', 'preconfigopts': 'export XSERVERCFLAGS_CFLAGS=" " && export XSERVERCFLAGS_LIBS=$EBROOTX11/lib &&', @@ -61,94 +61,94 @@ local_components = [ 'sources': ['util-macros-%(version)s.tar.gz'], 'start_dir': 'util-macros-%(version)s', }), - ('libpthread-stubs', '0.4', common_specs), # 2017-03-14 - ('bigreqsproto', '1.1.2', common_specs), # 2012-03-23 - ('local_compositeproto', '0.4.2', common_specs), # 2010-10-30 - ('damageproto', '1.2.1', common_specs), # 2010-10-30 - ('dmxproto', '2.3.1', common_specs), # 2011-01-06 - ('dri2proto', '2.8', common_specs), # 2012-07-11 - ('dri3proto', '1.0', common_specs), # 2013-11-01 - ('fixesproto', '5.0', common_specs), # 2011-03-08 - ('fontsproto', '2.1.3', common_specs), # 2014-04-14 - ('glproto', '1.4.17', common_specs), # 2013-12-10 - ('inputproto', '2.3.2', common_specs), # 2016-04-04 - ('kbproto', '1.0.7', common_specs), # 2015-05-01 - ('xkbdata', '1.0.1', common_specs), - ('presentproto', '1.1', common_specs), # 2017-01-26 - ('randrproto', '1.5.0', common_specs), # 2015-05-17 - ('recordproto', '1.14.2', common_specs), # 2012-03-23 - ('renderproto', '0.11.1', common_specs), # 2010-08-10 - ('resourceproto', '1.2.0', common_specs), # 2011-05-28 - ('scrnsaverproto', '1.2.2', common_specs), # 2012-03-23 - ('videoproto', '2.3.3', common_specs), # 2016-03-11 - ('xcmiscproto', '1.2.2', common_specs), # 2012-03-23 - ('xextproto', '7.3.0', common_specs), # 2013-12-27 - ('xf86bigfontproto', '1.2.0', common_specs), # 2009-08-27 - ('xf86dgaproto', '2.1', common_specs), # 2009-10-01 - ('xf86driproto', '2.1.1', common_specs), # 2011-01-06 - ('xf86vidmodeproto', '2.3.1', common_specs), # 2011-01-06 - ('xineramaproto', '1.2.1', common_specs), # 2011-01-06 - ('xproto', '7.0.31', common_specs), # 2016-09-23 - ('libXau', '1.0.8', common_specs), # 2013-05-24 - ('libXdmcp', '1.1.2', common_specs), # 2015-03-21 - ('xcb-proto', '1.12', common_specs), # 2016-05-18 - ('libxcb', '1.12', common_specs), # 2016-05-18 - ('xtrans', '1.3.5', common_specs), # 2014-09-22 + ('libpthread-stubs', '0.4', local_common_specs), # 2017-03-14 + ('bigreqsproto', '1.1.2', local_common_specs), # 2012-03-23 + ('local_compositeproto', '0.4.2', local_common_specs), # 2010-10-30 + ('damageproto', '1.2.1', local_common_specs), # 2010-10-30 + ('dmxproto', '2.3.1', local_common_specs), # 2011-01-06 + ('dri2proto', '2.8', local_common_specs), # 2012-07-11 + ('dri3proto', '1.0', local_common_specs), # 2013-11-01 + ('fixesproto', '5.0', local_common_specs), # 2011-03-08 + ('fontsproto', '2.1.3', local_common_specs), # 2014-04-14 + ('glproto', '1.4.17', local_common_specs), # 2013-12-10 + ('inputproto', '2.3.2', local_common_specs), # 2016-04-04 + ('kbproto', '1.0.7', local_common_specs), # 2015-05-01 + ('xkbdata', '1.0.1', local_common_specs), + ('presentproto', '1.1', local_common_specs), # 2017-01-26 + ('randrproto', '1.5.0', local_common_specs), # 2015-05-17 + ('recordproto', '1.14.2', local_common_specs), # 2012-03-23 + ('renderproto', '0.11.1', local_common_specs), # 2010-08-10 + ('resourceproto', '1.2.0', local_common_specs), # 2011-05-28 + ('scrnsaverproto', '1.2.2', local_common_specs), # 2012-03-23 + ('videoproto', '2.3.3', local_common_specs), # 2016-03-11 + ('xcmiscproto', '1.2.2', local_common_specs), # 2012-03-23 + ('xextproto', '7.3.0', local_common_specs), # 2013-12-27 + ('xf86bigfontproto', '1.2.0', local_common_specs), # 2009-08-27 + ('xf86dgaproto', '2.1', local_common_specs), # 2009-10-01 + ('xf86driproto', '2.1.1', local_common_specs), # 2011-01-06 + ('xf86vidmodeproto', '2.3.1', local_common_specs), # 2011-01-06 + ('xineramaproto', '1.2.1', local_common_specs), # 2011-01-06 + ('xproto', '7.0.31', local_common_specs), # 2016-09-23 + ('libXau', '1.0.8', local_common_specs), # 2013-05-24 + ('libXdmcp', '1.1.2', local_common_specs), # 2015-03-21 + ('xcb-proto', '1.12', local_common_specs), # 2016-05-18 + ('libxcb', '1.12', local_common_specs), # 2016-05-18 + ('xtrans', '1.3.5', local_common_specs), # 2014-09-22 ('libxkbcommon', '0.7.1', { # 2017-01-18 'sources': ['libxkbcommon-%(version)s.tar.xz'], 'start_dir': 'libxkbcommon-%(version)s', }), - ('libX11', '1.6.5', common_specs), # 2017-02-26 - ('libXext', '1.3.3', common_specs), # 2014-07-24 - ('libFS', '1.0.7', common_specs), # 2015-05-01 - ('libICE', '1.0.9', common_specs), # 2014-06-07 - ('libSM', '1.2.2', common_specs), # 2013-09-08 - ('libXScrnSaver', '1.2.2', common_specs), # 2012-03-08 - ('libXt', '1.1.5', common_specs), # 2015-05-01 - ('libXmu', '1.1.2', common_specs), # 2013-09-08 - ('libXpm', '3.5.12', common_specs), # 2016-12-15 - ('libXaw', '1.0.13', common_specs), # 2015-05-01 - ('libXfixes', '5.0.3', common_specs), # 2016-10-04 - ('libXlocal_composite', '0.4.4', common_specs), # 2013-01-03 - ('libXrender', '0.9.10', common_specs), # 2016-10-04 - ('libXcursor', '1.1.14', common_specs), # 2013-05-30 - ('libXdamage', '1.1.4', common_specs), # 2013-01-03 - ('libfontenc', '1.1.3', common_specs), # 2015-05-01 - ('libXfont', '1.5.2', common_specs), # 2016-08-31 - ('libXfont2', '2.0.1', common_specs), # 2015-12-11 - ('libXft', '2.3.2', common_specs), # 2014-06-06 - ('libXi', '1.7.9', common_specs), # 2017-01-23 - ('libXinerama', '1.1.3', common_specs), # 2013-05-31 - ('libXrandr', '1.5.1', common_specs), # 2016-10-04 - ('libXres', '1.0.7', common_specs), # 2013-05-31 - ('libXtst', '1.2.3', common_specs), # 2016-10-04 - ('libXv', '1.0.11', common_specs), # 2016-10-04 - ('libXvMC', '1.0.10', common_specs), # 2016-10-04 - ('libXxf86dga', '1.1.4', common_specs), # 2013-05-31 - ('libXxf86vm', '1.1.4', common_specs), # 2015-02-24 - ('libdmx', '1.1.3', common_specs), # 2013-05-28 - ('libpciaccess', '0.13.4', common_specs), # 2015-05-01 - ('libxkbfile', '1.0.9', common_specs), # 2015-05-01 - ('libxshmfence', '1.2', common_specs), # 2015-01-02 - ('xkblocal_comp', '1.4.0', common_specs), - ('xcb-util', '0.4.0', common_specs), # 2014-10-15 - ('xcb-util-image', '0.4.0', common_specs), # 2014-10-15 - ('xcb-util-keysyms', '0.4.0', common_specs), # 2014-10-01 - ('xcb-util-renderutil', '0.3.9', common_specs), # 2014-06-13 - ('xcb-util-wm', '0.4.1', common_specs), # 2014-02-19 - ('xcb-util-cursor', '0.1.3', common_specs), # 2016-05-12 - ('xcursor-themes', '1.0.4', common_specs), - ('font-util', '1.3.1', common_specs), - ('encodings', '1.0.4', common_specs), - ('font-alias', '1.0.3', common_specs), - ('font-adobe-utopia-type1', '1.0.4', common_specs), - ('font-bh-ttf', '1.0.3', common_specs), - ('font-bh-type1', '1.0.3', common_specs), - ('font-ibm-type1', '1.0.3', common_specs), - ('font-misc-ethiopic', '1.0.3', common_specs), - ('font-xfree86-type1', '1.0.4', common_specs), - ('pixman', '0.34.0', common_specs), - ('xorg-server', '1.19.3', server_specs), + ('libX11', '1.6.5', local_common_specs), # 2017-02-26 + ('libXext', '1.3.3', local_common_specs), # 2014-07-24 + ('libFS', '1.0.7', local_common_specs), # 2015-05-01 + ('libICE', '1.0.9', local_common_specs), # 2014-06-07 + ('libSM', '1.2.2', local_common_specs), # 2013-09-08 + ('libXScrnSaver', '1.2.2', local_common_specs), # 2012-03-08 + ('libXt', '1.1.5', local_common_specs), # 2015-05-01 + ('libXmu', '1.1.2', local_common_specs), # 2013-09-08 + ('libXpm', '3.5.12', local_common_specs), # 2016-12-15 + ('libXaw', '1.0.13', local_common_specs), # 2015-05-01 + ('libXfixes', '5.0.3', local_common_specs), # 2016-10-04 + ('libXlocal_composite', '0.4.4', local_common_specs), # 2013-01-03 + ('libXrender', '0.9.10', local_common_specs), # 2016-10-04 + ('libXcursor', '1.1.14', local_common_specs), # 2013-05-30 + ('libXdamage', '1.1.4', local_common_specs), # 2013-01-03 + ('libfontenc', '1.1.3', local_common_specs), # 2015-05-01 + ('libXfont', '1.5.2', local_common_specs), # 2016-08-31 + ('libXfont2', '2.0.1', local_common_specs), # 2015-12-11 + ('libXft', '2.3.2', local_common_specs), # 2014-06-06 + ('libXi', '1.7.9', local_common_specs), # 2017-01-23 + ('libXinerama', '1.1.3', local_common_specs), # 2013-05-31 + ('libXrandr', '1.5.1', local_common_specs), # 2016-10-04 + ('libXres', '1.0.7', local_common_specs), # 2013-05-31 + ('libXtst', '1.2.3', local_common_specs), # 2016-10-04 + ('libXv', '1.0.11', local_common_specs), # 2016-10-04 + ('libXvMC', '1.0.10', local_common_specs), # 2016-10-04 + ('libXxf86dga', '1.1.4', local_common_specs), # 2013-05-31 + ('libXxf86vm', '1.1.4', local_common_specs), # 2015-02-24 + ('libdmx', '1.1.3', local_common_specs), # 2013-05-28 + ('libpciaccess', '0.13.4', local_common_specs), # 2015-05-01 + ('libxkbfile', '1.0.9', local_common_specs), # 2015-05-01 + ('libxshmfence', '1.2', local_common_specs), # 2015-01-02 + ('xkblocal_comp', '1.4.0', local_common_specs), + ('xcb-util', '0.4.0', local_common_specs), # 2014-10-15 + ('xcb-util-image', '0.4.0', local_common_specs), # 2014-10-15 + ('xcb-util-keysyms', '0.4.0', local_common_specs), # 2014-10-01 + ('xcb-util-renderutil', '0.3.9', local_common_specs), # 2014-06-13 + ('xcb-util-wm', '0.4.1', local_common_specs), # 2014-02-19 + ('xcb-util-cursor', '0.1.3', local_common_specs), # 2016-05-12 + ('xcursor-themes', '1.0.4', local_common_specs), + ('font-util', '1.3.1', local_common_specs), + ('encodings', '1.0.4', local_common_specs), + ('font-alias', '1.0.3', local_common_specs), + ('font-adobe-utopia-type1', '1.0.4', local_common_specs), + ('font-bh-ttf', '1.0.3', local_common_specs), + ('font-bh-type1', '1.0.3', local_common_specs), + ('font-ibm-type1', '1.0.3', local_common_specs), + ('font-misc-ethiopic', '1.0.3', local_common_specs), + ('font-xfree86-type1', '1.0.4', local_common_specs), + ('pixman', '0.34.0', local_common_specs), + ('xorg-server', '1.19.3', local_server_specs), ] # Python is required for xcb-proto @@ -166,7 +166,7 @@ modluafooter = 'add_property("state","testing")' # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [ diff --git a/x/X11/X11-20170314.eb b/x/X11/X11-20170314.eb index d9f3a1d1..c5b9c088 100644 --- a/x/X11/X11-20170314.eb +++ b/x/X11/X11-20170314.eb @@ -33,7 +33,7 @@ builddependencies = [ default_easyblock = 'ConfigureMake' -common_specs = { +local_common_specs = { 'sources': [SOURCE_TAR_GZ], 'start_dir': '%(name)s-%(version)s', } @@ -42,80 +42,80 @@ local_components = [ 'sources': ['util-macros-%(version)s.tar.gz'], 'start_dir': 'util-macros-%(version)s', }), - ('libpthread-stubs', '0.4', common_specs), # 2017-03-14 - ('bigreqsproto', '1.1.2', common_specs), # 2012-03-23 - ('local_compositeproto', '0.4.2', common_specs), # 2010-10-30 - ('damageproto', '1.2.1', common_specs), # 2010-10-30 - ('dmxproto', '2.3.1', common_specs), # 2011-01-06 - ('dri2proto', '2.8', common_specs), # 2012-07-11 - ('dri3proto', '1.0', common_specs), # 2013-11-01 - ('fixesproto', '5.0', common_specs), # 2011-03-08 - ('fontsproto', '2.1.3', common_specs), # 2014-04-14 - ('glproto', '1.4.17', common_specs), # 2013-12-10 - ('inputproto', '2.3.2', common_specs), # 2016-04-04 - ('kbproto', '1.0.7', common_specs), # 2015-05-01 - ('presentproto', '1.1', common_specs), # 2017-01-26 - ('randrproto', '1.5.0', common_specs), # 2015-05-17 - ('recordproto', '1.14.2', common_specs), # 2012-03-23 - ('renderproto', '0.11.1', common_specs), # 2010-08-10 - ('resourceproto', '1.2.0', common_specs), # 2011-05-28 - ('scrnsaverproto', '1.2.2', common_specs), # 2012-03-23 - ('videoproto', '2.3.3', common_specs), # 2016-03-11 - ('xcmiscproto', '1.2.2', common_specs), # 2012-03-23 - ('xextproto', '7.3.0', common_specs), # 2013-12-27 - ('xf86bigfontproto', '1.2.0', common_specs), # 2009-08-27 - ('xf86dgaproto', '2.1', common_specs), # 2009-10-01 - ('xf86driproto', '2.1.1', common_specs), # 2011-01-06 - ('xf86vidmodeproto', '2.3.1', common_specs), # 2011-01-06 - ('xineramaproto', '1.2.1', common_specs), # 2011-01-06 - ('xproto', '7.0.31', common_specs), # 2016-09-23 - ('libXau', '1.0.8', common_specs), # 2013-05-24 - ('libXdmcp', '1.1.2', common_specs), # 2015-03-21 - ('xcb-proto', '1.12', common_specs), # 2016-05-18 - ('libxcb', '1.12', common_specs), # 2016-05-18 - ('xtrans', '1.3.5', common_specs), # 2014-09-22 + ('libpthread-stubs', '0.4', local_common_specs), # 2017-03-14 + ('bigreqsproto', '1.1.2', local_common_specs), # 2012-03-23 + ('local_compositeproto', '0.4.2', local_common_specs), # 2010-10-30 + ('damageproto', '1.2.1', local_common_specs), # 2010-10-30 + ('dmxproto', '2.3.1', local_common_specs), # 2011-01-06 + ('dri2proto', '2.8', local_common_specs), # 2012-07-11 + ('dri3proto', '1.0', local_common_specs), # 2013-11-01 + ('fixesproto', '5.0', local_common_specs), # 2011-03-08 + ('fontsproto', '2.1.3', local_common_specs), # 2014-04-14 + ('glproto', '1.4.17', local_common_specs), # 2013-12-10 + ('inputproto', '2.3.2', local_common_specs), # 2016-04-04 + ('kbproto', '1.0.7', local_common_specs), # 2015-05-01 + ('presentproto', '1.1', local_common_specs), # 2017-01-26 + ('randrproto', '1.5.0', local_common_specs), # 2015-05-17 + ('recordproto', '1.14.2', local_common_specs), # 2012-03-23 + ('renderproto', '0.11.1', local_common_specs), # 2010-08-10 + ('resourceproto', '1.2.0', local_common_specs), # 2011-05-28 + ('scrnsaverproto', '1.2.2', local_common_specs), # 2012-03-23 + ('videoproto', '2.3.3', local_common_specs), # 2016-03-11 + ('xcmiscproto', '1.2.2', local_common_specs), # 2012-03-23 + ('xextproto', '7.3.0', local_common_specs), # 2013-12-27 + ('xf86bigfontproto', '1.2.0', local_common_specs), # 2009-08-27 + ('xf86dgaproto', '2.1', local_common_specs), # 2009-10-01 + ('xf86driproto', '2.1.1', local_common_specs), # 2011-01-06 + ('xf86vidmodeproto', '2.3.1', local_common_specs), # 2011-01-06 + ('xineramaproto', '1.2.1', local_common_specs), # 2011-01-06 + ('xproto', '7.0.31', local_common_specs), # 2016-09-23 + ('libXau', '1.0.8', local_common_specs), # 2013-05-24 + ('libXdmcp', '1.1.2', local_common_specs), # 2015-03-21 + ('xcb-proto', '1.12', local_common_specs), # 2016-05-18 + ('libxcb', '1.12', local_common_specs), # 2016-05-18 + ('xtrans', '1.3.5', local_common_specs), # 2014-09-22 ('libxkbcommon', '0.7.1', { # 2017-01-18 'sources': ['libxkbcommon-%(version)s.tar.xz'], 'start_dir': 'libxkbcommon-%(version)s', }), - ('libX11', '1.6.5', common_specs), # 2017-02-26 - ('libXext', '1.3.3', common_specs), # 2014-07-24 - ('libFS', '1.0.7', common_specs), # 2015-05-01 - ('libICE', '1.0.9', common_specs), # 2014-06-07 - ('libSM', '1.2.2', common_specs), # 2013-09-08 - ('libXScrnSaver', '1.2.2', common_specs), # 2012-03-08 - ('libXt', '1.1.5', common_specs), # 2015-05-01 - ('libXmu', '1.1.2', common_specs), # 2013-09-08 - ('libXpm', '3.5.12', common_specs), # 2016-12-15 - ('libXaw', '1.0.13', common_specs), # 2015-05-01 - ('libXfixes', '5.0.3', common_specs), # 2016-10-04 - ('libXlocal_composite', '0.4.4', common_specs), # 2013-01-03 - ('libXrender', '0.9.10', common_specs), # 2016-10-04 - ('libXcursor', '1.1.14', common_specs), # 2013-05-30 - ('libXdamage', '1.1.4', common_specs), # 2013-01-03 - ('libfontenc', '1.1.3', common_specs), # 2015-05-01 - ('libXfont', '1.5.2', common_specs), # 2016-08-31 - ('libXfont2', '2.0.1', common_specs), # 2015-12-11 - ('libXft', '2.3.2', common_specs), # 2014-06-06 - ('libXi', '1.7.9', common_specs), # 2017-01-23 - ('libXinerama', '1.1.3', common_specs), # 2013-05-31 - ('libXrandr', '1.5.1', common_specs), # 2016-10-04 - ('libXres', '1.0.7', common_specs), # 2013-05-31 - ('libXtst', '1.2.3', common_specs), # 2016-10-04 - ('libXv', '1.0.11', common_specs), # 2016-10-04 - ('libXvMC', '1.0.10', common_specs), # 2016-10-04 - ('libXxf86dga', '1.1.4', common_specs), # 2013-05-31 - ('libXxf86vm', '1.1.4', common_specs), # 2015-02-24 - ('libdmx', '1.1.3', common_specs), # 2013-05-28 - ('libpciaccess', '0.13.4', common_specs), # 2015-05-01 - ('libxkbfile', '1.0.9', common_specs), # 2015-05-01 - ('libxshmfence', '1.2', common_specs), # 2015-01-02 - ('xcb-util', '0.4.0', common_specs), # 2014-10-15 - ('xcb-util-image', '0.4.0', common_specs), # 2014-10-15 - ('xcb-util-keysyms', '0.4.0', common_specs), # 2014-10-01 - ('xcb-util-renderutil', '0.3.9', common_specs), # 2014-06-13 - ('xcb-util-wm', '0.4.1', common_specs), # 2014-02-19 - ('xcb-util-cursor', '0.1.3', common_specs), # 2016-05-12 + ('libX11', '1.6.5', local_common_specs), # 2017-02-26 + ('libXext', '1.3.3', local_common_specs), # 2014-07-24 + ('libFS', '1.0.7', local_common_specs), # 2015-05-01 + ('libICE', '1.0.9', local_common_specs), # 2014-06-07 + ('libSM', '1.2.2', local_common_specs), # 2013-09-08 + ('libXScrnSaver', '1.2.2', local_common_specs), # 2012-03-08 + ('libXt', '1.1.5', local_common_specs), # 2015-05-01 + ('libXmu', '1.1.2', local_common_specs), # 2013-09-08 + ('libXpm', '3.5.12', local_common_specs), # 2016-12-15 + ('libXaw', '1.0.13', local_common_specs), # 2015-05-01 + ('libXfixes', '5.0.3', local_common_specs), # 2016-10-04 + ('libXlocal_composite', '0.4.4', local_common_specs), # 2013-01-03 + ('libXrender', '0.9.10', local_common_specs), # 2016-10-04 + ('libXcursor', '1.1.14', local_common_specs), # 2013-05-30 + ('libXdamage', '1.1.4', local_common_specs), # 2013-01-03 + ('libfontenc', '1.1.3', local_common_specs), # 2015-05-01 + ('libXfont', '1.5.2', local_common_specs), # 2016-08-31 + ('libXfont2', '2.0.1', local_common_specs), # 2015-12-11 + ('libXft', '2.3.2', local_common_specs), # 2014-06-06 + ('libXi', '1.7.9', local_common_specs), # 2017-01-23 + ('libXinerama', '1.1.3', local_common_specs), # 2013-05-31 + ('libXrandr', '1.5.1', local_common_specs), # 2016-10-04 + ('libXres', '1.0.7', local_common_specs), # 2013-05-31 + ('libXtst', '1.2.3', local_common_specs), # 2016-10-04 + ('libXv', '1.0.11', local_common_specs), # 2016-10-04 + ('libXvMC', '1.0.10', local_common_specs), # 2016-10-04 + ('libXxf86dga', '1.1.4', local_common_specs), # 2013-05-31 + ('libXxf86vm', '1.1.4', local_common_specs), # 2015-02-24 + ('libdmx', '1.1.3', local_common_specs), # 2013-05-28 + ('libpciaccess', '0.13.4', local_common_specs), # 2015-05-01 + ('libxkbfile', '1.0.9', local_common_specs), # 2015-05-01 + ('libxshmfence', '1.2', local_common_specs), # 2015-01-02 + ('xcb-util', '0.4.0', local_common_specs), # 2014-10-15 + ('xcb-util-image', '0.4.0', local_common_specs), # 2014-10-15 + ('xcb-util-keysyms', '0.4.0', local_common_specs), # 2014-10-01 + ('xcb-util-renderutil', '0.3.9', local_common_specs), # 2014-06-13 + ('xcb-util-wm', '0.4.1', local_common_specs), # 2014-02-19 + ('xcb-util-cursor', '0.1.3', local_common_specs), # 2016-05-12 ] # Python is required for xcb-proto @@ -131,7 +131,7 @@ postinstallcmds = [ # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [ diff --git a/x/XQilla/XQilla-2.3.2-goolf-1.7.20.eb b/x/XQilla/XQilla-2.3.2-goolf-1.7.20.eb index c6db3af2..7c3d0d0d 100644 --- a/x/XQilla/XQilla-2.3.2-goolf-1.7.20.eb +++ b/x/XQilla/XQilla-2.3.2-goolf-1.7.20.eb @@ -17,10 +17,10 @@ source_urls = [ configopts = '--with-xerces=$EBROOTXERCESMINCPLUSPLUS' -xerces_version = '3.1.2' +local_xerces_version = '3.1.2' dependencies = [ - ('Xerces-C++', xerces_version), + ('Xerces-C++', local_xerces_version), ] moduleclass = 'lib' diff --git a/x/xorg-fonts/xorg-fonts-20170314.eb b/x/xorg-fonts/xorg-fonts-20170314.eb index 7d67daae..df06420b 100644 --- a/x/xorg-fonts/xorg-fonts-20170314.eb +++ b/x/xorg-fonts/xorg-fonts-20170314.eb @@ -33,7 +33,7 @@ builddependencies = [ default_easyblock = 'ConfigureMake' -common_specs = { +local_common_specs = { 'sources': [SOURCE_TAR_GZ], 'start_dir': '%(name)s-%(version)s', } @@ -42,80 +42,80 @@ local_components = [ 'sources': ['util-macros-%(version)s.tar.gz'], 'start_dir': 'util-macros-%(version)s', }), - ('libpthread-stubs', '0.4', common_specs), # 2017-03-14 - ('bigreqsproto', '1.1.2', common_specs), # 2012-03-23 - ('local_compositeproto', '0.4.2', common_specs), # 2010-10-30 - ('damageproto', '1.2.1', common_specs), # 2010-10-30 - ('dmxproto', '2.3.1', common_specs), # 2011-01-06 - ('dri2proto', '2.8', common_specs), # 2012-07-11 - ('dri3proto', '1.0', common_specs), # 2013-11-01 - ('fixesproto', '5.0', common_specs), # 2011-03-08 - ('fontsproto', '2.1.3', common_specs), # 2014-04-14 - ('glproto', '1.4.17', common_specs), # 2013-12-10 - ('inputproto', '2.3.2', common_specs), # 2016-04-04 - ('kbproto', '1.0.7', common_specs), # 2015-05-01 - ('presentproto', '1.1', common_specs), # 2017-01-26 - ('randrproto', '1.5.0', common_specs), # 2015-05-17 - ('recordproto', '1.14.2', common_specs), # 2012-03-23 - ('renderproto', '0.11.1', common_specs), # 2010-08-10 - ('resourceproto', '1.2.0', common_specs), # 2011-05-28 - ('scrnsaverproto', '1.2.2', common_specs), # 2012-03-23 - ('videoproto', '2.3.3', common_specs), # 2016-03-11 - ('xcmiscproto', '1.2.2', common_specs), # 2012-03-23 - ('xextproto', '7.3.0', common_specs), # 2013-12-27 - ('xf86bigfontproto', '1.2.0', common_specs), # 2009-08-27 - ('xf86dgaproto', '2.1', common_specs), # 2009-10-01 - ('xf86driproto', '2.1.1', common_specs), # 2011-01-06 - ('xf86vidmodeproto', '2.3.1', common_specs), # 2011-01-06 - ('xineramaproto', '1.2.1', common_specs), # 2011-01-06 - ('xproto', '7.0.31', common_specs), # 2016-09-23 - ('libXau', '1.0.8', common_specs), # 2013-05-24 - ('libXdmcp', '1.1.2', common_specs), # 2015-03-21 - ('xcb-proto', '1.12', common_specs), # 2016-05-18 - ('libxcb', '1.12', common_specs), # 2016-05-18 - ('xtrans', '1.3.5', common_specs), # 2014-09-22 + ('libpthread-stubs', '0.4', local_common_specs), # 2017-03-14 + ('bigreqsproto', '1.1.2', local_common_specs), # 2012-03-23 + ('local_compositeproto', '0.4.2', local_common_specs), # 2010-10-30 + ('damageproto', '1.2.1', local_common_specs), # 2010-10-30 + ('dmxproto', '2.3.1', local_common_specs), # 2011-01-06 + ('dri2proto', '2.8', local_common_specs), # 2012-07-11 + ('dri3proto', '1.0', local_common_specs), # 2013-11-01 + ('fixesproto', '5.0', local_common_specs), # 2011-03-08 + ('fontsproto', '2.1.3', local_common_specs), # 2014-04-14 + ('glproto', '1.4.17', local_common_specs), # 2013-12-10 + ('inputproto', '2.3.2', local_common_specs), # 2016-04-04 + ('kbproto', '1.0.7', local_common_specs), # 2015-05-01 + ('presentproto', '1.1', local_common_specs), # 2017-01-26 + ('randrproto', '1.5.0', local_common_specs), # 2015-05-17 + ('recordproto', '1.14.2', local_common_specs), # 2012-03-23 + ('renderproto', '0.11.1', local_common_specs), # 2010-08-10 + ('resourceproto', '1.2.0', local_common_specs), # 2011-05-28 + ('scrnsaverproto', '1.2.2', local_common_specs), # 2012-03-23 + ('videoproto', '2.3.3', local_common_specs), # 2016-03-11 + ('xcmiscproto', '1.2.2', local_common_specs), # 2012-03-23 + ('xextproto', '7.3.0', local_common_specs), # 2013-12-27 + ('xf86bigfontproto', '1.2.0', local_common_specs), # 2009-08-27 + ('xf86dgaproto', '2.1', local_common_specs), # 2009-10-01 + ('xf86driproto', '2.1.1', local_common_specs), # 2011-01-06 + ('xf86vidmodeproto', '2.3.1', local_common_specs), # 2011-01-06 + ('xineramaproto', '1.2.1', local_common_specs), # 2011-01-06 + ('xproto', '7.0.31', local_common_specs), # 2016-09-23 + ('libXau', '1.0.8', local_common_specs), # 2013-05-24 + ('libXdmcp', '1.1.2', local_common_specs), # 2015-03-21 + ('xcb-proto', '1.12', local_common_specs), # 2016-05-18 + ('libxcb', '1.12', local_common_specs), # 2016-05-18 + ('xtrans', '1.3.5', local_common_specs), # 2014-09-22 ('libxkbcommon', '0.7.1', { # 2017-01-18 'sources': ['libxkbcommon-%(version)s.tar.xz'], 'start_dir': 'libxkbcommon-%(version)s', }), - ('libX11', '1.6.5', common_specs), # 2017-02-26 - ('libXext', '1.3.3', common_specs), # 2014-07-24 - ('libFS', '1.0.7', common_specs), # 2015-05-01 - ('libICE', '1.0.9', common_specs), # 2014-06-07 - ('libSM', '1.2.2', common_specs), # 2013-09-08 - ('libXScrnSaver', '1.2.2', common_specs), # 2012-03-08 - ('libXt', '1.1.5', common_specs), # 2015-05-01 - ('libXmu', '1.1.2', common_specs), # 2013-09-08 - ('libXpm', '3.5.12', common_specs), # 2016-12-15 - ('libXaw', '1.0.13', common_specs), # 2015-05-01 - ('libXfixes', '5.0.3', common_specs), # 2016-10-04 - ('libXlocal_composite', '0.4.4', common_specs), # 2013-01-03 - ('libXrender', '0.9.10', common_specs), # 2016-10-04 - ('libXcursor', '1.1.14', common_specs), # 2013-05-30 - ('libXdamage', '1.1.4', common_specs), # 2013-01-03 - ('libfontenc', '1.1.3', common_specs), # 2015-05-01 - ('libXfont', '1.5.2', common_specs), # 2016-08-31 - ('libXfont2', '2.0.1', common_specs), # 2015-12-11 - ('libXft', '2.3.2', common_specs), # 2014-06-06 - ('libXi', '1.7.9', common_specs), # 2017-01-23 - ('libXinerama', '1.1.3', common_specs), # 2013-05-31 - ('libXrandr', '1.5.1', common_specs), # 2016-10-04 - ('libXres', '1.0.7', common_specs), # 2013-05-31 - ('libXtst', '1.2.3', common_specs), # 2016-10-04 - ('libXv', '1.0.11', common_specs), # 2016-10-04 - ('libXvMC', '1.0.10', common_specs), # 2016-10-04 - ('libXxf86dga', '1.1.4', common_specs), # 2013-05-31 - ('libXxf86vm', '1.1.4', common_specs), # 2015-02-24 - ('libdmx', '1.1.3', common_specs), # 2013-05-28 - ('libpciaccess', '0.13.4', common_specs), # 2015-05-01 - ('libxkbfile', '1.0.9', common_specs), # 2015-05-01 - ('libxshmfence', '1.2', common_specs), # 2015-01-02 - ('xcb-util', '0.4.0', common_specs), # 2014-10-15 - ('xcb-util-image', '0.4.0', common_specs), # 2014-10-15 - ('xcb-util-keysyms', '0.4.0', common_specs), # 2014-10-01 - ('xcb-util-renderutil', '0.3.9', common_specs), # 2014-06-13 - ('xcb-util-wm', '0.4.1', common_specs), # 2014-02-19 - ('xcb-util-cursor', '0.1.3', common_specs), # 2016-05-12 + ('libX11', '1.6.5', local_common_specs), # 2017-02-26 + ('libXext', '1.3.3', local_common_specs), # 2014-07-24 + ('libFS', '1.0.7', local_common_specs), # 2015-05-01 + ('libICE', '1.0.9', local_common_specs), # 2014-06-07 + ('libSM', '1.2.2', local_common_specs), # 2013-09-08 + ('libXScrnSaver', '1.2.2', local_common_specs), # 2012-03-08 + ('libXt', '1.1.5', local_common_specs), # 2015-05-01 + ('libXmu', '1.1.2', local_common_specs), # 2013-09-08 + ('libXpm', '3.5.12', local_common_specs), # 2016-12-15 + ('libXaw', '1.0.13', local_common_specs), # 2015-05-01 + ('libXfixes', '5.0.3', local_common_specs), # 2016-10-04 + ('libXlocal_composite', '0.4.4', local_common_specs), # 2013-01-03 + ('libXrender', '0.9.10', local_common_specs), # 2016-10-04 + ('libXcursor', '1.1.14', local_common_specs), # 2013-05-30 + ('libXdamage', '1.1.4', local_common_specs), # 2013-01-03 + ('libfontenc', '1.1.3', local_common_specs), # 2015-05-01 + ('libXfont', '1.5.2', local_common_specs), # 2016-08-31 + ('libXfont2', '2.0.1', local_common_specs), # 2015-12-11 + ('libXft', '2.3.2', local_common_specs), # 2014-06-06 + ('libXi', '1.7.9', local_common_specs), # 2017-01-23 + ('libXinerama', '1.1.3', local_common_specs), # 2013-05-31 + ('libXrandr', '1.5.1', local_common_specs), # 2016-10-04 + ('libXres', '1.0.7', local_common_specs), # 2013-05-31 + ('libXtst', '1.2.3', local_common_specs), # 2016-10-04 + ('libXv', '1.0.11', local_common_specs), # 2016-10-04 + ('libXvMC', '1.0.10', local_common_specs), # 2016-10-04 + ('libXxf86dga', '1.1.4', local_common_specs), # 2013-05-31 + ('libXxf86vm', '1.1.4', local_common_specs), # 2015-02-24 + ('libdmx', '1.1.3', local_common_specs), # 2013-05-28 + ('libpciaccess', '0.13.4', local_common_specs), # 2015-05-01 + ('libxkbfile', '1.0.9', local_common_specs), # 2015-05-01 + ('libxshmfence', '1.2', local_common_specs), # 2015-01-02 + ('xcb-util', '0.4.0', local_common_specs), # 2014-10-15 + ('xcb-util-image', '0.4.0', local_common_specs), # 2014-10-15 + ('xcb-util-keysyms', '0.4.0', local_common_specs), # 2014-10-01 + ('xcb-util-renderutil', '0.3.9', local_common_specs), # 2014-06-13 + ('xcb-util-wm', '0.4.1', local_common_specs), # 2014-02-19 + ('xcb-util-cursor', '0.1.3', local_common_specs), # 2016-05-12 ] # Python is required for xcb-proto @@ -131,7 +131,7 @@ postinstallcmds = [ # specify that Bundle easyblock should run a full sanity check, rather # than just trying to load the module -full_sanity_check = True +local_full_sanity_check = True sanity_check_paths = { 'files': [ diff --git a/y/YAML-Syck/YAML-Syck-1.27-goolf-1.4.10-Perl-5.16.3.eb b/y/YAML-Syck/YAML-Syck-1.27-goolf-1.4.10-Perl-5.16.3.eb index 16f13651..38e0b40b 100644 --- a/y/YAML-Syck/YAML-Syck-1.27-goolf-1.4.10-Perl-5.16.3.eb +++ b/y/YAML-Syck/YAML-Syck-1.27-goolf-1.4.10-Perl-5.16.3.eb @@ -21,21 +21,21 @@ toolchain = {'name': 'goolf', 'version': '1.4.10'} source_urls = ['http://www.cpan.org/modules/by-module/YAML'] sources = [SOURCE_TAR_GZ] -perl = 'Perl' -perlver = '5.16.3' -perlverextra = '' -versionsuffix = '-%s-%s%s' % (perl, perlver, perlverextra) +local_perl = 'Perl' +local_perlver = '5.16.3' +local_perlverextra = '' +versionsuffix = '-%s-%s%s' % (local_perl, local_perlver, local_perlverextra) dependencies = [ - (perl, perlver, perlverextra), + (local_perl, local_perlver, local_perlverextra), ] options = {'modulename': 'YAML::Syck'} -perlmajver = perlver.split('.')[0] +local_perlmajver = local_perlver.split('.')[0] sanity_check_paths = { 'files': [], 'dirs': [ - 'lib/perl%s/site_perl/%s/x86_64-linux-thread-multi/YAML' % - (perlmajver, perlver)], } + 'lib/local_perl%s/site_perl/%s/x86_64-linux-thread-multi/YAML' % + (local_perlmajver, local_perlver)], } moduleclass = 'data' diff --git a/y/YAML-Syck/YAML-Syck-1.27-ictce-4.1.13-Perl-5.16.3.eb b/y/YAML-Syck/YAML-Syck-1.27-ictce-4.1.13-Perl-5.16.3.eb index cf125078..28ed303d 100644 --- a/y/YAML-Syck/YAML-Syck-1.27-ictce-4.1.13-Perl-5.16.3.eb +++ b/y/YAML-Syck/YAML-Syck-1.27-ictce-4.1.13-Perl-5.16.3.eb @@ -21,21 +21,21 @@ toolchain = {'name': 'ictce', 'version': '4.1.13'} source_urls = ['http://www.cpan.org/modules/by-module/YAML'] sources = [SOURCE_TAR_GZ] -perl = 'Perl' -perlver = '5.16.3' -perlverextra = '' -versionsuffix = '-%s-%s%s' % (perl, perlver, perlverextra) +local_perl = 'Perl' +local_perlver = '5.16.3' +local_perlverextra = '' +versionsuffix = '-%s-%s%s' % (local_perl, local_perlver, local_perlverextra) dependencies = [ - (perl, perlver, perlverextra), + (local_perl, local_perlver, local_perlverextra), ] options = {'modulename': 'YAML::Syck'} -perlmajver = perlver.split('.')[0] +local_perlmajver = local_perlver.split('.')[0] sanity_check_paths = { 'files': [], 'dirs': [ - 'lib/perl%s/site_perl/%s/x86_64-linux-thread-multi/YAML' % - (perlmajver, perlver)], } + 'lib/local_perl%s/site_perl/%s/x86_64-linux-thread-multi/YAML' % + (local_perlmajver, local_perlver)], } moduleclass = 'data' diff --git a/y/YAML-Syck/YAML-Syck-1.27-ictce-5.3.0-Perl-5.16.3.eb b/y/YAML-Syck/YAML-Syck-1.27-ictce-5.3.0-Perl-5.16.3.eb index 2dcc6628..352da3e0 100644 --- a/y/YAML-Syck/YAML-Syck-1.27-ictce-5.3.0-Perl-5.16.3.eb +++ b/y/YAML-Syck/YAML-Syck-1.27-ictce-5.3.0-Perl-5.16.3.eb @@ -21,21 +21,21 @@ toolchain = {'name': 'ictce', 'version': '5.3.0'} source_urls = ['http://www.cpan.org/modules/by-module/YAML'] sources = [SOURCE_TAR_GZ] -perl = 'Perl' -perlver = '5.16.3' -perlverextra = '' -versionsuffix = '-%s-%s%s' % (perl, perlver, perlverextra) +local_perl = 'Perl' +local_perlver = '5.16.3' +local_perlverextra = '' +versionsuffix = '-%s-%s%s' % (local_perl, local_perlver, local_perlverextra) dependencies = [ - (perl, perlver, perlverextra), + (local_perl, local_perlver, local_perlverextra), ] options = {'modulename': 'YAML::Syck'} -perlmajver = perlver.split('.')[0] +local_perlmajver = local_perlver.split('.')[0] sanity_check_paths = { 'files': [], 'dirs': [ - 'lib/perl%s/site_perl/%s/x86_64-linux-thread-multi/YAML' % - (perlmajver, perlver)], } + 'lib/local_perl%s/site_perl/%s/x86_64-linux-thread-multi/YAML' % + (local_perlmajver, local_perlver)], } moduleclass = 'data'