mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
synced 2025-04-13 18:31:21 +01:00
modified: c/CGAL/CGAL-4.12-intel-2017a.eb
new file: g/gompi/gompi-2017c.eb new file: h/HDF5/HDF5-1.10.4-gompi-2017c.eb new file: h/h5py/h5py-2.9.0-Py-3.6.eb new file: l/libGLU/libGLU-9.0.0-GCC-6.3.0-2.27.eb new file: l/libxml2/libxml2-2.9.9.eb new file: l/libxslt/libxslt-1.1.33.eb modified: l/libyaml/libyaml-0.1.7.eb new file: l/libyaml/libyaml-0.2.1.eb new file: l/lxml/lxml-4.3.0-Py-3.6.eb new file: m/matplotlib/matplotlib-3.0.2-Py-3.6.eb new file: m/mpi4py/mpi4py-3.0.1-Py-3.6.eb modified: o/OpenMPI/OpenMPI-2.0.2-GCC-6.3.0-2.27.eb modified: o/OpenMPI/OpenMPI-2.1.1-GCC-6.3.0-2.27.eb modified: p/ParaView/ParaView-5.4.1-intel-2017a-mpi.eb new file: p/PyYAML/PyYAML-3.13-Py-3.6.eb modified: q/Qt5/Qt5-5.11.1-GCC-6.3.0-2.27.eb deleted: o/OpenFOAM/OpenFOAM-5.0-intel-2017a-uv.eb deleted: p/ParaView/ParaView-5.4.1-foss-2017a-mpi-uv.eb deleted: p/ParaView/ParaView-5.4.1-intel-2017a-mpi-uv.eb
This commit is contained in:
Lukáš Krupčík
parent
38045be04e
commit
860f201d90
@ -20,7 +20,7 @@ dependencies = [
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('MPFR', '3.1.4'),
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('GMP', '6.1.2', '', True),
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('Mesa', '18.1.3', '', ('GCC', '6.3.0-2.27')),
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('libGLU', '9.0.0', '', True),
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('libGLU', '9.0.0', '', ('GCC', '6.3.0-2.27')),
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('Qt5', '5.11.1', '', ('GCC', '6.3.0-2.27')),
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]
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22
g/gompi/gompi-2017c.eb
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22
g/gompi/gompi-2017c.eb
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@ -0,0 +1,22 @@
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# IT4Innovations 2019
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easyblock = "Toolchain"
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name = 'gompi'
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version = '2017c'
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homepage = '(none)'
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description = """GNU Compiler Collection (GCC) based compiler toolchain,
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including OpenMPI for MPI support."""
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toolchain = {'name': 'dummy', 'version': ''}
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gccver = '6.3.0-2.27'
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# compiler toolchain dependencies
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dependencies = [
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('GCC', gccver), # includes both GCC and binutils
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('OpenMPI', '2.1.1', '', ('GCC', gccver)),
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]
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moduleclass = 'toolchain'
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27
h/HDF5/HDF5-1.10.4-gompi-2017c.eb
Normal file
27
h/HDF5/HDF5-1.10.4-gompi-2017c.eb
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@ -0,0 +1,27 @@
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# IT4Innovations 2019
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name = 'HDF5'
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version = '1.10.4'
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versionsuffix = '-parallel'
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homepage = 'http://www.hdfgroup.org/HDF5/'
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description = """HDF5 is a unique technology suite that makes possible the management of
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extremely large and complex data collections."""
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toolchain = {'name': 'gompi', 'version': '2017c'}
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toolchainopts = {'pic': True}
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source_urls = [
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'https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-%(version_major_minor)s/hdf5-%(version)s/src']
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sources = [SOURCELOWER_TAR_GZ]
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configopts = " --enable-parallel --enable-shared "
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configopts += " --enable-static --enable-fortran "
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configopts += " --enable-hl --with-zlib=$EBROOTZLIB"
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dependencies = [
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('zlib', '1.2.11', '', True),
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('Szip', '2.1', '', True),
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]
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moduleclass = 'data'
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25
h/h5py/h5py-2.9.0-Py-3.6.eb
Normal file
25
h/h5py/h5py-2.9.0-Py-3.6.eb
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@ -0,0 +1,25 @@
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# IT4Innovations 2019
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easyblock = 'PythonPackage'
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name = 'h5py'
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version = '2.9.0'
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homepage = 'https://github.com/jupyter/testpath'
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description = """Test utilities for code working with files and commands"""
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toolchain = {'name': 'Py', 'version': '3.6'}
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source_urls = [PYPI_SOURCE]
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sources = [SOURCE_TAR_GZ]
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dependencies = [
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('HDF5', '1.10.4', '-parallel', ('gompi', '2017c')),
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('numpy', '1.15.4'),
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('mpi4py', '3.0.1'), # required for MPI support
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('six', '1.11.0'),
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]
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sanity_check_paths = {'files': [], 'dirs': [
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'lib/python3.6/site-packages/%(name)s-%(version)s-py3.6-linux-x86_64.egg'], }
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moduleclass = 'python'
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29
l/libGLU/libGLU-9.0.0-GCC-6.3.0-2.27.eb
Normal file
29
l/libGLU/libGLU-9.0.0-GCC-6.3.0-2.27.eb
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# IT4Innovations 2018
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easyblock = 'ConfigureMake'
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name = 'libGLU'
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version = '9.0.0'
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homepage = 'ftp://ftp.freedesktop.org/pub/mesa/glu/'
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description = """The OpenGL Utility Library (GLU) is a computer graphics library for OpenGL. """
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toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'}
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toolchainopts = {'pic': True}
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source_urls = [
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'http://ftp.iij.ad.jp/pub/X11/x.org/pub/mesa/glu/'
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]
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sources = ['glu-%(version)s.tar.gz']
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dependencies = [(
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'Mesa', '18.1.3') # GL.h
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]
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sanity_check_paths = {
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'files': ['lib/libGLU.so.1'],
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'dirs': [],
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}
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moduleclass = 'vis'
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27
l/libxml2/libxml2-2.9.9.eb
Normal file
27
l/libxml2/libxml2-2.9.9.eb
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# IT4Innovations 2019
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easyblock = 'ConfigureMake'
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name = 'libxml2'
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version = '2.9.9'
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homepage = 'http://xmlsoft.org/'
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description = """Libxml2 is the XML C parser and
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toolchain developed for the Gnome project
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(but usable outside of the Gnome platform)."""
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toolchain = {'name': 'dummy', 'version': ''}
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source_urls = [
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'http://xmlsoft.org/sources/',
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'http://xmlsoft.org/sources/old/'
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]
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sources = [SOURCELOWER_TAR_GZ]
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preconfigopts = 'export LDFLAGS="-L$EBROOTZLIB/lib" && '
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configopts = 'CC="$CC" CXX="$CXX" --with-pic --without-python'
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dependencies = [('zlib', '1.2.11')]
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moduleclass = 'lib'
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26
l/libxslt/libxslt-1.1.33.eb
Normal file
26
l/libxslt/libxslt-1.1.33.eb
Normal file
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# IT4Innovations 2019
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easyblock = 'ConfigureMake'
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name = 'libxslt'
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version = '1.1.33'
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homepage = 'http://xmlsoft.org/'
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description = """Libxslt is the XSLT C library developed for the GNOME project
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(but usable outside of the Gnome platform)."""
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toolchain = {'name': 'dummy', 'version': ''}
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source_urls = [
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'http://xmlsoft.org/sources/',
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'http://xmlsoft.org/sources/old/'
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]
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sources = [SOURCELOWER_TAR_GZ]
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dependencies = [
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('zlib', '1.2.11'),
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('libxml2', '2.9.9'),
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]
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moduleclass = 'lib'
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0
l/libyaml/libyaml-0.1.7.eb
Executable file → Normal file
0
l/libyaml/libyaml-0.1.7.eb
Executable file → Normal file
21
l/libyaml/libyaml-0.2.1.eb
Normal file
21
l/libyaml/libyaml-0.2.1.eb
Normal file
@ -0,0 +1,21 @@
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# IT4Innovations 2019
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easyblock = 'ConfigureMake'
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name = 'libyaml'
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version = '0.2.1'
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homepage = 'http://pyyaml.org/wiki/LibYAML'
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description = """LibYAML is a YAML 1.1 parser and emitter written in C."""
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toolchain = {'name': 'dummy', 'version': ''}
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sources = ['yaml-%(version)s.tar.gz']
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source_urls = ['http://pyyaml.org/download/libyaml/']
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sanity_check_paths = {
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'files': ["include/yaml.h", "lib/libyaml.a", "lib/libyaml.%s" % SHLIB_EXT],
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'dirs': ["lib/pkgconfig"]
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}
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moduleclass = 'lib'
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24
l/lxml/lxml-4.3.0-Py-3.6.eb
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24
l/lxml/lxml-4.3.0-Py-3.6.eb
Normal file
@ -0,0 +1,24 @@
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# IT4Innovations 2019
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easyblock = "PythonPackage"
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name = 'lxml'
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version = '4.3.0'
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homepage = 'http://lxml.de/'
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description = """The lxml XML toolkit is a Pythonic binding for the C libraries libxml2 and libxslt."""
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toolchain = {'name': 'Py', 'version': '3.6'}
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source_urls = [PYPI_SOURCE]
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sources = [SOURCE_TAR_GZ]
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dependencies = [
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('libxml2', '2.9.9', '', True),
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('libxslt', '1.1.33', '', True),
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]
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sanity_check_paths = {'files': [], 'dirs': [
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('lib/python3.6/site-packages/%(name)s-%(version)s-py3.6-linux-x86_64.egg')]}
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moduleclass = 'python'
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29
m/matplotlib/matplotlib-3.0.2-Py-3.6.eb
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29
m/matplotlib/matplotlib-3.0.2-Py-3.6.eb
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# IT4Innovations 2019
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easyblock = "PythonPackage"
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name = 'matplotlib'
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version = '3.0.2'
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homepage = 'http://matplotlib.org'
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description = """Matplotlib is a python 2D plotting library which produces publication quality figures in a variety of
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hardcopy formats and interactive environments across platforms. matplotlib can be used in python scripts, the python
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and ipython shell, web application servers, and six graphical user interface toolkits."""
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toolchain = {'name': 'Py', 'version': '3.6'}
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source_urls = ['https://github.com/matplotlib/matplotlib/archive/']
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sources = ['v%(version)s.tar.gz']
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dependencies = [
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('freetype', '2.9.1', '-libpng-1.6.34', True),
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('libpng', '1.6.34', '', True),
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('python-dateutil', '2.6.1'),
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('numpy', '1.15.4'),
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('pyparsing', '2.2.0'),
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('six', '1.11.0'),
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]
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sanity_check_paths = {'files': [], 'dirs': [
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'lib/python3.6/site-packages/%(name)s-%(version)s-py3.6-linux-x86_64.egg/%(name)s'], }
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moduleclass = 'python'
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26
m/mpi4py/mpi4py-3.0.1-Py-3.6.eb
Normal file
26
m/mpi4py/mpi4py-3.0.1-Py-3.6.eb
Normal file
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# IT4Innovations 2018
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easyblock = 'PythonPackage'
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name = 'mpi4py'
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version = '3.0.1'
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homepage = 'http://mpi4py.scipy.org/docs'
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description = """MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for
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the Python programming language, allowing any Python program to exploit multiple processors."""
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toolchain = {'name': 'Py', 'version': '3.6'}
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source_urls = [PYPI_SOURCE]
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sources = [SOURCE_TAR_GZ]
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dependencies = [
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('gompi', '2017c', '', True),
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]
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sanity_check_paths = {
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'files': [],
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'dirs': ['lib/python3.6/site-packages/mpi4py'],
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}
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moduleclass = 'python'
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@ -1,41 +0,0 @@
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# IT4Innovations 2018
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name = 'OpenFOAM'
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version = '5.0'
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homepage = 'http://www.openfoam.com/'
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description = """OpenFOAM is a free, open source CFD software package.
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OpenFOAM has an extensive range of features to solve anything from complex fluid flows
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involving chemical reactions, turbulence and heat transfer,
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to solid dynamics and electromagnetics."""
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toolchain = {'name': 'intel', 'version': '2017a'}
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toolchainopts = {'cstd': 'c++11'}
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source_urls = [
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'https://github.com/OpenFOAM/OpenFOAM-%(version_major)s.x/archive']
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sources = ['version-%(version)s.tar.gz']
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patches = ['OpenFOAM-%(version)s-cleanup.patch']
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dependencies = [
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('libreadline', '7.0', '', True),
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('ncurses', '6.0', '', True),
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# OpenFOAM requires 64 bit METIS using 32 bit indexes (array indexes)
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('METIS', '5.1.0'),
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('SCOTCH', '6.0.5a'),
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('CGAL', '4.8.1'),
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# Maximum ParaView version 5.2! (ADD_PARAVIEW_OBJECT_PANEL is no longer
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# supported)
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('ParaView', '5.4.1', '-mpi'),
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]
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builddependencies = [
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('Bison', '3.0.4', '', True),
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('CMake', '3.7.2', '', True),
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('flex', '2.6.0', '', True),
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]
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modextrapaths = {'PATH': 'OpenFOAM-%(version)s/bin'}
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moduleclass = 'cae'
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@ -31,7 +31,7 @@ configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
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preconfigopts = 'export LIBS="-ldl" && '
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# needed for --with-verbs
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osdependencies = [('libibverbs-dev', 'libibverbs-devel'), ]
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osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')]
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libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"]
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@ -12,9 +12,9 @@ source_urls = [
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'http://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
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sources = [SOURCELOWER_TAR_GZ]
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builddependencies = [
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('Java', '1.8.0_121', '', True)
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]
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#builddependencies = [
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# ('Java', '1.8.0_121', '', True)
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#]
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dependencies = [
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('hwloc', '1.11.7')
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@ -30,11 +30,11 @@ configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
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# configopts += '--disable-dlopen ' # dont disable dlopen!
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# https://github.com/open-mpi/ompi/issues/3630
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configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
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configopts += '--enable-mpi-java ' # Java support RT#4090
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#configopts += '--enable-mpi-java ' # Java support RT#4090
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configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings
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||||
# needed for --with-verbs
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osdependencies = [('libibverbs-dev', 'libibverbs-devel')]
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osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')]
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||||
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libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"]
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||||
sanity_check_paths = {
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||||
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@ -1,62 +0,0 @@
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# IT4Innovations 2019
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# UV1
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||||
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easyblock = 'CMakeMake'
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||||
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||||
name = 'ParaView'
|
||||
version = '5.4.1'
|
||||
versionsuffix = '-mpi'
|
||||
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||||
homepage = "http://www.paraview.org"
|
||||
description = "ParaView is a scientific parallel visualizer."
|
||||
|
||||
toolchain = {'name': 'foss', 'version': '2017a'}
|
||||
toolchainopts = {'pic': True, 'usempi': True}
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||||
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||||
download_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile='
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||||
source_urls = [
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||||
'http://www.paraview.org/paraview-downloads/%s' %
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||||
download_suffix]
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||||
sources = ["ParaView-v%(version)s.tar.gz"]
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||||
checksums = ['390d0f5dc66bf432e202a39b1f34193af4bf8aad2355338fa5e2778ea07a80e4']
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||||
|
||||
dependencies = [
|
||||
('X11', '20160819', '', True),
|
||||
('Mesa', '18.1.3', '', ('GCC', '6.3.0-2.27')),
|
||||
('libGLU', '9.0.0', '', True),
|
||||
('Qt5', '5.8.0', '', ('GCC', '6.3.0-2.27')),
|
||||
('zlib', '1.2.11', '', True),
|
||||
('HDF5', '1.10.2'),
|
||||
('Python', '2.7.13', '', True),
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||||
]
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||||
|
||||
builddependencies = [
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||||
# ('CMake', '3.11.4', '', ('GCC', '6.3.0-2.27'))
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||||
('CMake', '3.9.1', '', True)
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||||
]
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||||
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||||
separate_build_dir = True
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||||
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||||
configopts = '-DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON -DVTK_OPENGL_HAS_OSMESA=ON -DPARAVIEW_USE_MPI=ON '
|
||||
configopts += '-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include -DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s ' % SHLIB_EXT
|
||||
configopts += '-DOSMESA_INCLUDE_DIR=$EBROOTMESA/include -DOSMESA_LIBRARY=$EBROOTMESA/lib/libOSMesa.%s ' % SHLIB_EXT
|
||||
configopts += '-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s ' % SHLIB_EXT
|
||||
configopts += '-DVTK_USE_SYSTEM_HDF5=ON -DPARAVIEW_ENABLE_PYTHON=ON -DBUILD_SHARED_LIBS=ON '
|
||||
# if you want to build server only Paraview, uncomment the following line:
|
||||
# configopts += '-DVTK_USE_X=OFF '
|
||||
|
||||
# Without internet connection turn off testing (uncomment the following line)
|
||||
configopts += '-DBUILD_TESTING=OFF '
|
||||
# Or consult https://gitlab.kitware.com/vtk/vtk/blob/master/Documentation/dev/git/data.md
|
||||
# and download ExternalData to $EASYBUILD_SOURCEPATH and adjust -DExternalData_OBJECT_STORES accordingly
|
||||
# Without internet connection, comment the following two lines (configopts
|
||||
# and prebuildopts)
|
||||
configopts += '-DExternalData_OBJECT_STORES=%(builddir)s/ExternalData '
|
||||
|
||||
configopts += ' -DPARAVIEW_QT_VERSION=5 -DQT_QMAKE_EXECUTABLE=$EBROOTQT5/bin/qmake '
|
||||
# The ParaView server can be cranky, test downloads are quite often failing, especially in the case
|
||||
# of parallel downloads. Using ; insted of && gives a second chance to download the test files, if the
|
||||
# first serial attempt would fail.
|
||||
prebuildopts = 'make VTKData ;'
|
||||
|
||||
moduleclass = 'vis'
|
||||
@ -1,57 +0,0 @@
|
||||
# IT4Innovations
|
||||
|
||||
easyblock = 'CMakeMake'
|
||||
|
||||
name = 'ParaView'
|
||||
version = '5.4.1'
|
||||
versionsuffix = '-mpi'
|
||||
|
||||
homepage = "http://www.paraview.org"
|
||||
description = "ParaView is a scientific parallel visualizer."
|
||||
|
||||
toolchain = {'name': 'intel', 'version': '2017a'}
|
||||
toolchainopts = {'pic': True, 'usempi': True}
|
||||
|
||||
download_suffix = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=all&downloadFile='
|
||||
source_urls = [
|
||||
'http://www.paraview.org/paraview-downloads/%s' %
|
||||
download_suffix]
|
||||
sources = ["ParaView-v%(version)s.tar.gz"]
|
||||
|
||||
patches = ['ParaView-5.4.1-Qt.patch']
|
||||
|
||||
dependencies = [
|
||||
('X11', '20160819', '', True),
|
||||
('Mesa', '12.0.2'),
|
||||
('libGLU', '9.0.0', '', True),
|
||||
('Qt5', '5.8.0', '', ('GCC', '6.3.0-2.27')),
|
||||
('zlib', '1.2.11', '', True),
|
||||
('HDF5', '1.8.17'),
|
||||
('Python', '2.7.13', '', True),
|
||||
]
|
||||
|
||||
builddependencies = [('CMake', '3.9.1', '', True)]
|
||||
|
||||
separate_build_dir = True
|
||||
|
||||
configopts = '-DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON -DVTK_OPENGL_HAS_OSMESA=ON -DPARAVIEW_USE_MPI=ON '
|
||||
configopts += '-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include -DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s ' % SHLIB_EXT
|
||||
configopts += '-DOSMESA_INCLUDE_DIR=$EBROOTMESA/include -DOSMESA_LIBRARY=$EBROOTMESA/lib/libOSMesa.%s ' % SHLIB_EXT
|
||||
configopts += '-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s ' % SHLIB_EXT
|
||||
configopts += '-DVTK_USE_SYSTEM_HDF5=ON -DPARAVIEW_ENABLE_PYTHON=ON -DBUILD_SHARED_LIBS=ON -DVTK_RENDERING_BACKEND=OpenGL2 '
|
||||
configopts += '-DPARAVIEW_QT_VERSION=5 '
|
||||
# if you want to build server only Paraview, uncomment the following line:
|
||||
# configopts += '-DVTK_USE_X=OFF '
|
||||
|
||||
# Without internet connection turn off testing (uncomment the following line)
|
||||
configopts += '-DBUILD_TESTING=OFF '
|
||||
# Or consult https://gitlab.kitware.com/vtk/vtk/blob/master/Documentation/dev/git/data.md
|
||||
# and download ExternalData to $EASYBUILD_SOURCEPATH and adjust -DExternalData_OBJECT_STORES accordingly
|
||||
# Without internet connection, comment the following two lines (configopts and prebuildopts)
|
||||
#configopts += '-DExternalData_OBJECT_STORES=%(builddir)s/ExternalData '
|
||||
# The ParaView server can be cranky, test downloads are quite often failing, especially in the case
|
||||
# of parallel downloads. Using ; insted of && gives a second chance to download the test files, if the
|
||||
# first serial attempt would fail.
|
||||
#prebuildopts = 'make VTKData ;'
|
||||
|
||||
moduleclass = 'vis'
|
||||
@ -23,7 +23,7 @@ patches = ['ParaView-5.4.1-Qt.patch']
|
||||
dependencies = [
|
||||
('X11', '20170314', '', True),
|
||||
('Mesa', '18.1.3', '', ('GCC', '6.3.0-2.27')),
|
||||
('libGLU', '9.0.0', '', True),
|
||||
('libGLU', '9.0.0', '', ('GCC', '6.3.0-2.27')),
|
||||
('Qt5', '5.11.1', '', ('GCC', '6.3.0-2.27')),
|
||||
('zlib', '1.2.11', '', True),
|
||||
('HDF5', '1.8.17'),
|
||||
|
||||
27
p/PyYAML/PyYAML-3.13-Py-3.6.eb
Normal file
27
p/PyYAML/PyYAML-3.13-Py-3.6.eb
Normal file
@ -0,0 +1,27 @@
|
||||
# IT4Innovations 2019
|
||||
|
||||
easyblock = "PythonPackage"
|
||||
|
||||
name = "PyYAML"
|
||||
version = "3.13"
|
||||
|
||||
homepage = "https://pypi.python.org/pypi/PyYAML/"
|
||||
description = """PyYAML is a YAML parser and emitter for the Python programming language."""
|
||||
|
||||
toolchain = {'name': 'Py', 'version': '3.6'}
|
||||
|
||||
source_urls = [PYPI_SOURCE]
|
||||
sources = [SOURCE_TAR_GZ]
|
||||
|
||||
dependencies = [
|
||||
('libyaml', '0.2.1', '', True),
|
||||
]
|
||||
|
||||
options = {'modulename': 'yaml'}
|
||||
|
||||
sanity_check_paths = {
|
||||
'files': [],
|
||||
'dirs': ['lib/python3.6/site-packages/yaml'],
|
||||
}
|
||||
|
||||
moduleclass = 'python'
|
||||
@ -28,7 +28,7 @@ dependencies = [
|
||||
('GLib', '2.57.1', '', True),
|
||||
('libpng', '1.6.34', '', True),
|
||||
('X11', '20170314', '', True),
|
||||
('libGLU', '9.0.0', '', True),
|
||||
('libGLU', '9.0.0'),
|
||||
('Mesa', '18.1.3'),
|
||||
]
|
||||
|
||||
|
||||
Loading…
x
Reference in New Issue
Block a user