mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
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new file: a/ADIOS2/ADIOS2-2.7.0-gompi-2020e.eb
new file: c/c-blosc/c-blosc-1.21.0-GCC-10.3.0.eb new file: g/gompi/gompi-2020e.eb new file: h/HDF5/HDF5-1.12.0-gompi-2020e.eb new file: l/libfabric/libfabric-1.11.0-GCCcore-10.3.0.eb new file: o/OpenMPI/OpenMPI-4.1.4-GCC-10.3.0-CUDA-11.3.1.eb new file: o/openPMD-api/openPMD-api-0.14.4-gompi-2020e.eb new file: p/PNGwriter/PNGwriter-0.7.0-GCC-10.3.0.eb
This commit is contained in:
Lukas Krupcik
parent
e2c1c4720a
commit
59cb428266
40
a/ADIOS2/ADIOS2-2.7.0-gompi-2020e.eb
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a/ADIOS2/ADIOS2-2.7.0-gompi-2020e.eb
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# IT4Innovations
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# BS 2023
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easyblock = "CMakeMake"
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name = "ADIOS2"
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version = "2.7.0"
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homepage = 'https://github.com/ornladios/ADIOS2/'
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description = """This is ADIOS2: The Adaptable Input/Output (I/O) System.
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ADIOS2 is developed as part of the United States Department of Energy's Exascale Computing
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Project. It is a framework for scientific data I/O to publish and subscribe to data when
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and where required.
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ADIOS2 transports data as groups of self-describing variables and attributes across different
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media types (such as files, wide-area-networks, and remote direct memory access) using a
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common application programming interface for all transport modes. ADIOS2 can be used on
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supercomputers, cloud systems, and personal computers. """
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toolchain = {'name': 'gompi', 'version': '2020e'}
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source_urls = ['https://github.com/ornladios/ADIOS2/archive/refs/tags/']
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sources = ['v%(version)s.tar.gz']
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checksums = ['4b5df1a1f92d7ff380416dec7511cfcfe3dc44da27e486ed63c3e6cffb173924']
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builddependencies = [('CMake', '3.20.1')]
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dependencies = [
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('HDF5', '1.12.0'),
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('c-blosc', '1.21.0'),
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('libfabric', '1.12.1'),
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]
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separate_build_dir = True
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sanity_check_paths = {
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'files': ['bin/adios2-config', 'include/adios2.h', 'include/adios2_c.h'],
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'dirs': ['bin', 'include', 'lib64']
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}
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moduleclass = 'tools'
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33
c/c-blosc/c-blosc-1.21.0-GCC-10.3.0.eb
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c/c-blosc/c-blosc-1.21.0-GCC-10.3.0.eb
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# IT4Innovations
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# BS 2023
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easyblock = "CMakeMake"
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name = "c-blosc"
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version = "1.21.0"
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homepage = 'https://github.com/Blosc/c-blosc'
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description = """Blosc is a high performance compressor optimized for binary
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data. It has been designed to transmit data to the processor cache faster than
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the traditional, non-compressed, direct memory fetch approach via a memcpy() OS
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call. Blosc is the first compressor (that I'm aware of) that is meant not
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only to reduce the size of large datasets on-disk or in-memory, but also to
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accelerate memory-bound computations.
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"""
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toolchain = {'name': 'GCC', 'version': '10.3.0'}
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source_urls = ['https://github.com/Blosc/c-blosc/archive/refs/tags/']
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sources = ['v%(version)s.tar.gz']
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checksums = ['b0ef4fda82a1d9cbd11e0f4b9685abf14372db51703c595ecd4d76001a8b342d']
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builddependencies = [('CMake', '3.20.1')]
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separate_build_dir = True
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sanity_check_paths = {
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'files': ['include/blosc.h', 'include/blosc-export.h', 'lib/libblosc.a'],
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'dirs': ['include', 'lib']
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}
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moduleclass = 'tools'
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23
g/gompi/gompi-2020e.eb
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g/gompi/gompi-2020e.eb
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# IT4Innovations
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# LK 2023
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easyblock = "Toolchain"
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name = 'gompi'
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version = '2020e'
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homepage = '(none)'
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description = """GNU Compiler Collection (GCC) based local_compiler toolchain,
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including OpenMPI for MPI support."""
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toolchain = SYSTEM
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local_gccver = '10.3.0'
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# local_compiler toolchain dependencies
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dependencies = [
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('GCC', local_gccver), # includes both GCC and local_binutils
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('OpenMPI', '4.1.4', '-CUDA-11.3.1', ('GCC', local_gccver)),
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]
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moduleclass = 'toolchain'
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28
h/HDF5/HDF5-1.12.0-gompi-2020e.eb
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h/HDF5/HDF5-1.12.0-gompi-2020e.eb
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# IT4Innoivations
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# BS 2023
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name = 'HDF5'
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version = '1.12.0'
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homepage = 'https://portal.hdfgroup.org/display/support'
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description = """HDF5 is a data model, library, and file format for storing and managing data.
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It supports an unlimited variety of datatypes, and is designed for flexible
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and efficient I/O and for high volume and complex data."""
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toolchain = {'name': 'gompi', 'version': '2020e'}
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import os
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if os.environ.get("CLUSTERNAME") in ["KAROLINA"]:
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toolchainopts = {'optarch': 'march=core-avx2', 'pic': True, 'usempi': True}
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else:
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toolchainopts = {'pic': True, 'usempi': True}
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source_urls = ['https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-%(version_major_minor)s/hdf5-%(version)s/src']
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sources = [SOURCELOWER_TAR_GZ]
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checksums = ['a62dcb276658cb78e6795dd29bf926ed7a9bc4edf6e77025cd2c689a8f97c17a']
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dependencies = [
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('zlib', '1.2.11'),
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('Szip', '2.1.1'),
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]
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moduleclass = 'data'
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48
l/libfabric/libfabric-1.11.0-GCCcore-10.3.0.eb
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l/libfabric/libfabric-1.11.0-GCCcore-10.3.0.eb
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# IT4Innovations
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# LK 2023
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easyblock = 'ConfigureMake'
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name = 'libfabric'
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version = '1.11.0'
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homepage = 'https://ofiwg.github.io/libfabric/'
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description = """
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Libfabric is a core component of OFI. It is the library that defines and exports
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the user-space API of OFI, and is typically the only software that applications
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deal with directly. It works in conjunction with provider libraries, which are
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often integrated directly into libfabric.
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"""
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toolchain = {'name': 'GCCcore', 'version': '10.3.0'}
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toolchainopts = {'pic': True}
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github_account = 'ofiwg'
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source_urls = ['https://github.com/ofiwg/%(name)s/releases/download/v%(version)s']
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sources = [SOURCE_TAR_BZ2]
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checksums = ['9938abf628e7ea8dcf60a94a4b62d499fbc0dbc6733478b6db2e6a373c80d58f']
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builddependencies = [
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('binutils', '2.36.1'),
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('pkg-config', '0.29.2'),
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]
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osdependencies = [OS_PKG_IBVERBS_DEV]
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# Disable deprecated "sockets" provider
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configopts = "--disable-sockets "
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# Disable usNIC provider by default as this requires specific osdependencies
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# If you want to enable this provider you need to uncomment the following line:
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# osdependencies.append(('libnl3-devel', 'libnl3-dev'))
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configopts += "--disable-usnic "
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sanity_check_paths = {
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'files': ['bin/fi_info', 'bin/fi_pingpong', 'bin/fi_strerror'] +
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['lib/libfabric.%s' % x for x in ['a', SHLIB_EXT]],
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'dirs': ['include/rdma', 'lib/pkgconfig', 'share']
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}
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sanity_check_commands = ['fi_info']
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moduleclass = 'lib'
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87
o/OpenMPI/OpenMPI-4.1.4-GCC-10.3.0-CUDA-11.3.1.eb
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o/OpenMPI/OpenMPI-4.1.4-GCC-10.3.0-CUDA-11.3.1.eb
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# IT4Innovations
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# BS 2023
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name = 'OpenMPI'
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version = '4.1.4'
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versionsuffix = '-CUDA-11.3.1'
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homepage = 'https://www.open-mpi.org/'
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description = """The Open MPI Project is an open source MPI-3 implementation."""
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toolchain = {'name': 'GCC', 'version': '10.3.0'}
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source_urls = ['https://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
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sources = [SOURCELOWER_TAR_BZ2]
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checksums = [
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'92912e175fd1234368c8730c03f4996fe5942e7479bb1d10059405e7f2b3930d', # openmpi-4.1.4.tar.bz2
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]
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builddependencies = [
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('pkgconf', '1.8.0'),
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('Perl', '5.32.1'),
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('Autotools', '20210128'),
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]
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dependencies = [
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('zlib', '1.2.11'),
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('hwloc', '2.4.1'),
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('libevent', '2.1.12'),
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('UCX', '1.10.0'),
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('UCX-CUDA', '1.10.0', '-CUDA-11.3.1'),
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('libfabric', '1.12.1'),
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('PMIx', '3.2.3'),
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#('UCC', '1.0.0'),
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('CUDA', '11.3.1', '', True),
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]
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preconfigopts = './autogen.pl --force && '
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# IT4I-specific settings
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configopts = '--enable-shared --enable-mpi-thread-multiple --with-verbs '
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configopts += '--enable-mpirun-prefix-by-default '
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configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
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configopts += '--with-slurm ' # Enable slurm
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configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings
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configopts += '--with-ucx=$EBROOTUCX '
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configopts += '--with-cuda=$EBROOTCUDA '
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#configopts += '--with-pmix=/opt/it4i-libs/PMIx/4.2.6 '
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osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')]
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postinstallcmds = [
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'echo "# By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default." >> %(installdir)s/etc/openmpi-mca-params.conf',
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'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf',
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]
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local_libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"]
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sanity_check_paths = {
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'files': [
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"bin/%s" %
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binfile for binfile in [
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"ompi_info", "opal_wrapper", "orterun"]] + [
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"lib/lib%s.%s" %
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(libfile, SHLIB_EXT) for libfile in local_libs] + [
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"include/%s.h" %
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x for x in [
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"mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], }
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import os
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if os.environ.get("CLUSTERNAME") in ["BARBORA"]:
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modextravars = {'OMPI_MCA_btl_openib_if_include': 'mlx5_0',
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'OMPI_MCA_btl_tcp_if_include': '10.33.4.0/24',
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'OMPI_MCA_orte_base_help_aggregate': '0',
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'SLURM_MPI_TYPE': 'pmix_v4',
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}
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elif os.environ.get("CLUSTERNAME") in ["KAROLINA"]:
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modextravars = {'OMPI_MCA_btl_openib_if_include': 'mlx5_0',
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'OMPI_MCA_orte_base_help_aggregate': '0',
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'SLURM_MPI_TYPE': 'pmix_v4',
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}
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else:
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modextravars = {'OMPI_MCA_btl_openib_if_include': 'mlx4_0',
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'OMPI_MCA_oob_tcp_if_include': '10.0.0.0/8',
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'SLURM_MPI_TYPE': 'pmix_v4',
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}
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moduleclass = 'mpi'
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40
o/openPMD-api/openPMD-api-0.14.4-gompi-2020e.eb
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40
o/openPMD-api/openPMD-api-0.14.4-gompi-2020e.eb
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@ -0,0 +1,40 @@
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# IT4Innovations
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# BS 2023
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easyblock = "CMakeMake"
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name = "openPMD-api"
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version = "0.14.4"
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homepage = 'https://github.com/openPMD/openPMD-api'
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description = """openPMD is an open meta-data schema that provides meaning and self-description
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for data sets in science and engineering. See the openPMD standard for details of this schema.
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This library provides a reference API for openPMD data handling. Since openPMD is a schema
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(or markup) on top of portable, hierarchical file formats, this library implements various
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backends such as HDF5, ADIOS2 and JSON. Writing & reading through those backends and their
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associated files are supported for serial and MPI-parallel workflows.
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"""
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toolchain = {'name': 'gompi', 'version': '2020e'}
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source_urls = ['https://github.com/openPMD/openPMD-api/archive/refs/tags/']
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sources = ['%(version)s.tar.gz']
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checksums = ['42b7bcd043e772d63f0fe0e5e70da411f001db10096d5b8be797ffc88e786379']
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builddependencies = [('CMake', '3.20.1')]
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dependencies = [
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('HDF5', '1.12.0'),
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('ADIOS2', '2.7.0'),
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]
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configopts = '-DopenPMD_USE_ADIOS2=ON -DopenPMD_USE_HDF5=ON '
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separate_build_dir = True
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sanity_check_paths = {
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'files': ['bin/openpmd-ls', 'bin/openpmd-pipe', 'lib/libopenPMD.so'],
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'dirs': ['bin', 'include', 'lib64']
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}
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moduleclass = 'tools'
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40
p/PNGwriter/PNGwriter-0.7.0-GCC-10.3.0.eb
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p/PNGwriter/PNGwriter-0.7.0-GCC-10.3.0.eb
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# IT4Innovations
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# LK 2023
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easyblock = "CMakeMake"
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name = "PNGwriter"
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version = "0.7.0"
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homepage = 'https://github.com/pngwriter/pngwriter/'
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description = """PNGwriter is a very easy to use open source graphics library
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that uses PNG as its output format. The interface has been designed to be as
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simple and intuitive as possible. It supports plotting and reading pixels in
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the RGB (red, green, blue), HSV (hue, saturation, value/brightness) and CMYK
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(cyan, magenta, yellow, black) colour spaces, basic shapes, scaling, bilinear
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interpolation, full TrueType antialiased and rotated text support, bezier
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curves, opening existing PNG images and more. Documentation in English
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(and Spanish up to v0.5.4). Runs under Linux, Unix, Mac OS X and Windows.
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Requires libpng and optionally FreeType2 for the text support."""
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toolchain = {'name': 'GCC', 'version': '10.3.0'}
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source_urls = ['https://github.com/pngwriter/pngwriter/archive/refs/tags/']
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sources = ['%(version)s.tar.gz']
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checksums = ['82d46eef109f434f95eba9cf5908710ae4e75f575fd3858178ad06e800152825']
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builddependencies = [('CMake', '3.20.1')]
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dependencies = [
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('freetype', '2.10.4'),
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('libpng', '1.6.37'),
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]
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separate_build_dir = True
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sanity_check_paths = {
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'files': ['include/pngwriter.h', 'lib/libPNGwriter.a'],
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'dirs': ['include', 'lib']
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}
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moduleclass = 'lib'
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