mirror of
https://code.it4i.cz/sccs/easyconfigs-it4i.git
synced 2025-04-07 15:32:11 +01:00
new file: a/Anaconda3/Anaconda3-2020.11.eb
new file: a/Automake/Automake-1.16.2-GCCcore-9.3.0.eb new file: a/Autotools/Autotools-20200321-GCCcore-9.3.0.eb new file: l/libevent/libevent-2.1.12-GCCcore-9.3.0.eb new file: n/NVHPC/NVHPC-21.2-OpenMPI-4.0.5.eb new file: n/NVHPC/NVHPC-21.2.eb new file: o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-13.0.1.eb new file: o/OpenMPI/OpenMPI-4.0.5-NVHPC-21.2.eb new file: p/phono3py/phono3py-1.22.2-conda.eb new file: u/UCX/UCX-1.9.0-GCCcore-9.3.0.eb
This commit is contained in:
Lukáš Krupčík
parent
f09fcdf0c3
commit
437d2b2cdd
28
a/Anaconda3/Anaconda3-2020.11.eb
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28
a/Anaconda3/Anaconda3-2020.11.eb
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@ -0,0 +1,28 @@
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# author: Jillian Rowe <jillian.e.rowe@gmail.com>
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# config upgrade to v5.1.0 by Adam Huffman <adam.huffman@bdi.ox.ac.uk>
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# config upgrade to v5.0.1, v5.3.0, 2018.12, 2019.07, 2019.10, 2020.2, 2020.11 by J. Hein <joachim.hein@lunarc.lu.se>
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# config upgrade to 2019.03 by Davide Vanzo <davide.vanzo@vanderbilt.edu>
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easyblock = 'EB_Anaconda'
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name = 'Anaconda3'
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version = '2020.11'
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homepage = 'https://www.anaconda.com'
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description = """Built to complement the rich, open source Python community,
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the Anaconda platform provides an enterprise-ready data analytics platform
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that empowers companies to adopt a modern open data science analytics architecture.
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"""
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toolchain = SYSTEM
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source_urls = ['https://repo.anaconda.com/archive/']
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sources = ['%(name)s-%(version)s-Linux-%(arch)s.sh']
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checksums = [
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{
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'%(name)s-%(version)s-Linux-x86_64.sh': 'cf2ff493f11eaad5d09ce2b4feaa5ea90db5174303d5b3fe030e16d29aeef7de',
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'%(name)s-%(version)s-Linux-ppc64le.sh': '870535ada0a8ae75eeda8cd2bf7dde853ac9f4949b20e1b5641f1843a655f3b8',
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}
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]
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moduleclass = 'lang'
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35
a/Automake/Automake-1.16.2-GCCcore-9.3.0.eb
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35
a/Automake/Automake-1.16.2-GCCcore-9.3.0.eb
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# IT4Innovations 2021
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# LK
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easyblock = 'ConfigureMake'
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name = 'Automake'
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version = '1.16.2'
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homepage = 'https://www.gnu.org/software/automake/automake.html'
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description = "Automake: GNU Standards-compliant Makefile generator"
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toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
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source_urls = [GNU_SOURCE]
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sources = [SOURCELOWER_TAR_GZ]
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checksums = ['b2f361094b410b4acbf4efba7337bdb786335ca09eb2518635a09fb7319ca5c1']
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builddependencies = [
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('binutils', '2.34'),
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# non-standard Perl modules are required,
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# see https://github.com/easybuilders/easybuild-easyconfigs/issues/1822
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('Perl', '5.30.2'),
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]
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dependencies = [
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('Autoconf', '2.69'),
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]
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sanity_check_paths = {
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'files': ['bin/automake', 'bin/aclocal'],
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'dirs': []
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}
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moduleclass = 'devel'
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27
a/Autotools/Autotools-20200321-GCCcore-9.3.0.eb
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27
a/Autotools/Autotools-20200321-GCCcore-9.3.0.eb
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# IT4Innovations 2021
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# LK
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easyblock = 'Bundle'
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name = 'Autotools'
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version = '20200321' # date of the most recent change
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homepage = 'https://autotools.io'
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description = """
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This bundle collect the standard GNU build tools: Autoconf, Automake
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and libtool
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"""
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toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
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dependencies = [
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('Autoconf', '2.69'), # 20120424
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('Automake', '1.16.2'), # 20200321
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('libtool', '2.4.6'), # 20150215
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]
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# Pure bundle -- no need to specify 'binutils' used when building GCCcore
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# toolchain as build dependency
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moduleclass = 'devel'
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40
l/libevent/libevent-2.1.12-GCCcore-9.3.0.eb
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40
l/libevent/libevent-2.1.12-GCCcore-9.3.0.eb
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# IT4Innovations 2021
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# LK
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easyblock = 'ConfigureMake'
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name = 'libevent'
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version = '2.1.12'
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homepage = 'https://libevent.org/'
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description = """
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The libevent API provides a mechanism to execute a callback function when
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a specific event occurs on a file descriptor or after a timeout has been
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reached. Furthermore, libevent also support callbacks due to signals or
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regular timeouts.
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"""
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toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
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toolchainopts = {'pic': True}
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source_urls = ['https://github.com/%(name)s/%(name)s/releases/download/release-%(version)s-stable/']
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sources = ['%(name)s-%(version)s-stable.tar.gz']
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checksums = ['92e6de1be9ec176428fd2367677e61ceffc2ee1cb119035037a27d346b0403bb']
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|
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builddependencies = [
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('binutils', '2.34'),
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('pkg-config', '0.29.2'),
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]
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dependencies = [
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('zlib', '1.2.11'),
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]
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sanity_check_paths = {
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'files': ['bin/event_rpcgen.py', 'include/event.h', 'include/event2/event.h',
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'lib/libevent_core.%s' % SHLIB_EXT, 'lib/pkgconfig/libevent.pc'],
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'dirs': [],
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}
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moduleclass = 'lib'
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88
n/NVHPC/NVHPC-21.2-OpenMPI-4.0.5.eb
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88
n/NVHPC/NVHPC-21.2-OpenMPI-4.0.5.eb
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@ -0,0 +1,88 @@
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# IT4Innovations 2021
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# LK
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name = 'NVHPC'
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version = '21.2'
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versionsuffix = '-OpenMPI-4.0.5'
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homepage = 'https://developer.nvidia.com/hpc-sdk/'
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description = """C, C++ and Fortran compilers included with the NVIDIA HPC SDK (previously: PGI)"""
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|
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toolchain = SYSTEM
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||||
|
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# By downloading, you accept the HPC SDK Software License Agreement (https://docs.nvidia.com/hpc-sdk/eula/index.html)
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accept_eula = True
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source_urls = ['https://developer.download.nvidia.com/hpc-sdk/%(version)s/']
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local_tarball_tmpl = 'nvhpc_2021_%%(version_major)s%%(version_minor)s_Linux_%s_cuda_multi.tar.gz'
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sources = [local_tarball_tmpl % '%(arch)s']
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checksums = [
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{
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local_tarball_tmpl % 'x86_64':
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'8905e96a063baeca1da35f7fd20e3376',
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}
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]
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local_gccver = '9.3.0'
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dependencies = [
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('GCCcore', local_gccver),
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('binutils', '2.34', '', ('GCCcore', local_gccver)),
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# This is necessary to avoid cases where just libnuma.so.1 is present in the system and -lnuma fails
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('numactl', '2.0.13', '', ('GCCcore', local_gccver))
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]
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# specify default CUDA version that should be used by NVHPC
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# should match one of the CUDA versions that are included with this NVHPC version
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# (see install_components/Linux_x86_64/20.7/cuda/)
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||||
# for NVHPC 20.7, those are: 11.0, 10.2, 10.1;
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# this version can be tweaked from the EasyBuild command line with
|
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# --try-amend=default_cuda_version="10.2" (for example)
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default_cuda_version = '11.0'
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# NVHPC EasyBlock supports some features, which can be set via CLI or this easyconfig.
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# The following list gives examples for the easyconfig
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#
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# NVHPC needs CUDA to work. Two options are available: 1) Use NVHPC-bundled CUDA, 2) use system CUDA
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# 1) Bundled CUDA
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# If no easybuild dependency to CUDA is present, the bundled CUDA is taken. A version needs to be specified with
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# default_cuda_version = "11.0"
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# in this easyconfig file; alternatively, it can be specified through the command line during installation with
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# --try-amend=default_cuda_version="10.2"
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# 2) CUDA provided via EasyBuild
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# Use CUDAcore as a dependency, for example
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# dependencies = [('CUDAcore', '11.0.2')]
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# The parameter default_cuda_version still can be set as above.
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# If not set, it will be deduced from the CUDA module (via $EBVERSIONCUDA)
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#
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||||
# Define a NVHPC-default Compute Capability
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# cuda_compute_capabilities = "8.0"
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cuda_compute_capabilities = '7.0' #V100 GPU
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# Can also be specified on the EasyBuild command line via --cuda-compute-capabilities=8.0
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||||
# Only single values supported, not lists of values!
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||||
#
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||||
# Options to add/remove things to/from environment module (defaults shown)
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||||
# module_byo_compilers = Yes # Remove compilers from PATH (Bring-your-own compilers)
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# module_nvhpc_own_mpi = Yes # Add NVHPC's own pre-compiled OpenMPI
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||||
# module_add_math_libs = Yes # Add NVHPC's math libraries (which should be there from CUDA anyway)
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||||
# module_add_profilers = Yes # Add NVHPC's NVIDIA Profilers
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||||
# module_add_nccl = Yes # Add NVHPC's NCCL library
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||||
# module_add_nvshmem = Yes # Add NVHPC's NVSHMEM library
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||||
# module_add_cuda = Yes # Add NVHPC's bundled CUDA
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||||
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||||
local_openmpi_path = "Linux_x86_64/%(version)s/comm_libs/openmpi4/openmpi-4.0.5"
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||||
|
||||
modextrapaths = {
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||||
'PATH': "%s/bin" % (local_openmpi_path),
|
||||
'LD_LIBRARY_PATH': "%s/lib" % (local_openmpi_path),
|
||||
'LIBRARY_PATH': "%s/lib" % (local_openmpi_path),
|
||||
'CPATH': "%s/include" % (local_openmpi_path),
|
||||
'MANPATH': "%s/share/man" % (local_openmpi_path),
|
||||
'PKG_CONFIG_PATH': "%s/pkgconfig" % (local_openmpi_path),
|
||||
}
|
||||
|
||||
modextravars = {
|
||||
'OMPI_MCA_btl_openib_if_include': 'mlx5_0',
|
||||
'OMPI_MCA_btl_tcp_if_include': '10.33.4.0/24',
|
||||
'OMPI_MCA_orte_base_help_aggregate': '0',
|
||||
}
|
||||
|
||||
moduleclass = 'compiler'
|
||||
71
n/NVHPC/NVHPC-21.2.eb
Normal file
71
n/NVHPC/NVHPC-21.2.eb
Normal file
@ -0,0 +1,71 @@
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||||
# IT4Innovations 2021
|
||||
# LK
|
||||
|
||||
name = 'NVHPC'
|
||||
version = '21.2'
|
||||
|
||||
homepage = 'https://developer.nvidia.com/hpc-sdk/'
|
||||
description = """C, C++ and Fortran compilers included with the NVIDIA HPC SDK (previously: PGI)"""
|
||||
|
||||
toolchain = SYSTEM
|
||||
|
||||
# By downloading, you accept the HPC SDK Software License Agreement (https://docs.nvidia.com/hpc-sdk/eula/index.html)
|
||||
accept_eula = True
|
||||
source_urls = ['https://developer.download.nvidia.com/hpc-sdk/%(version)s/']
|
||||
local_tarball_tmpl = 'nvhpc_2021_%%(version_major)s%%(version_minor)s_Linux_%s_cuda_multi.tar.gz'
|
||||
sources = [local_tarball_tmpl % '%(arch)s']
|
||||
checksums = [
|
||||
{
|
||||
local_tarball_tmpl % 'x86_64':
|
||||
'8905e96a063baeca1da35f7fd20e3376',
|
||||
}
|
||||
]
|
||||
|
||||
local_gccver = '9.3.0'
|
||||
dependencies = [
|
||||
('GCCcore', local_gccver),
|
||||
('binutils', '2.34', '', ('GCCcore', local_gccver)),
|
||||
# This is necessary to avoid cases where just libnuma.so.1 is present in the system and -lnuma fails
|
||||
('numactl', '2.0.13', '', ('GCCcore', local_gccver))
|
||||
]
|
||||
|
||||
# specify default CUDA version that should be used by NVHPC
|
||||
# should match one of the CUDA versions that are included with this NVHPC version
|
||||
# (see install_components/Linux_x86_64/20.7/cuda/)
|
||||
# for NVHPC 20.7, those are: 11.0, 10.2, 10.1;
|
||||
# this version can be tweaked from the EasyBuild command line with
|
||||
# --try-amend=default_cuda_version="10.2" (for example)
|
||||
default_cuda_version = '11.0'
|
||||
|
||||
# NVHPC EasyBlock supports some features, which can be set via CLI or this easyconfig.
|
||||
# The following list gives examples for the easyconfig
|
||||
#
|
||||
# NVHPC needs CUDA to work. Two options are available: 1) Use NVHPC-bundled CUDA, 2) use system CUDA
|
||||
# 1) Bundled CUDA
|
||||
# If no easybuild dependency to CUDA is present, the bundled CUDA is taken. A version needs to be specified with
|
||||
# default_cuda_version = "11.0"
|
||||
# in this easyconfig file; alternatively, it can be specified through the command line during installation with
|
||||
# --try-amend=default_cuda_version="10.2"
|
||||
# 2) CUDA provided via EasyBuild
|
||||
# Use CUDAcore as a dependency, for example
|
||||
# dependencies = [('CUDAcore', '11.0.2')]
|
||||
# The parameter default_cuda_version still can be set as above.
|
||||
# If not set, it will be deduced from the CUDA module (via $EBVERSIONCUDA)
|
||||
#
|
||||
# Define a NVHPC-default Compute Capability
|
||||
# cuda_compute_capabilities = "8.0"
|
||||
cuda_compute_capabilities = '7.0' #V100 GPU
|
||||
# Can also be specified on the EasyBuild command line via --cuda-compute-capabilities=8.0
|
||||
# Only single values supported, not lists of values!
|
||||
#
|
||||
# Options to add/remove things to/from environment module (defaults shown)
|
||||
# module_byo_compilers = Yes # Remove compilers from PATH (Bring-your-own compilers)
|
||||
# module_nvhpc_own_mpi = False # Add NVHPC's own pre-compiled OpenMPI
|
||||
# module_add_math_libs = Yes # Add NVHPC's math libraries (which should be there from CUDA anyway)
|
||||
# module_add_profilers = Yes # Add NVHPC's NVIDIA Profilers
|
||||
# module_add_nccl = Yes # Add NVHPC's NCCL library
|
||||
# module_add_nvshmem = Yes # Add NVHPC's NVSHMEM library
|
||||
# module_add_cuda = Yes # Add NVHPC's bundled CUDA
|
||||
|
||||
# this bundle serves as a compiler-only toolchain, so it should be marked as compiler (important for HMNS)
|
||||
moduleclass = 'compiler'
|
||||
68
o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-13.0.1.eb
Normal file
68
o/OpenMPI/OpenMPI-4.0.5-GCC-10.2.0-Java-13.0.1.eb
Normal file
@ -0,0 +1,68 @@
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||||
# IT4Innovations 2021
|
||||
# LK
|
||||
|
||||
easyblock = 'ConfigureMake'
|
||||
|
||||
name = 'OpenMPI'
|
||||
version = '4.0.5'
|
||||
versionsuffix= '-Java-13.0.1'
|
||||
|
||||
homepage = 'http://www.open-mpi.org/'
|
||||
description = """The Open MPI Project is an open source MPI-2 implementation."""
|
||||
|
||||
toolchain = {'name': 'GCC', 'version': '10.2.0'}
|
||||
|
||||
source_urls = ['https://github.com/open-mpi/ompi/archive/']
|
||||
sources = ['v4.0.4.tar.gz']
|
||||
|
||||
dependencies = [
|
||||
('hwloc', '2.2.0'),
|
||||
('zlib', '1.2.11'),
|
||||
('UCX', '1.9.0',),
|
||||
('libfabric', '1.11.0'),
|
||||
('PMIx', '3.1.5'),
|
||||
('libevent', '2.1.12'),
|
||||
('Java', '13.0.1', '', True),
|
||||
]
|
||||
|
||||
preconfigopts = './autogen.pl && '
|
||||
|
||||
configopts = '--enable-shared --enable-mpi-thread-multiple --with-verbs '
|
||||
configopts += '--enable-mpirun-prefix-by-default '
|
||||
configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
|
||||
configopts += '--with-tm=/opt/pbs ' # Enable PBS
|
||||
configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings
|
||||
configopts += '--with-ucx=$EBROOTUCX '
|
||||
configopts += '--enable-mpi-java ' # Java support RT#28536
|
||||
|
||||
osdependencies = [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')]
|
||||
|
||||
postinstallcmds = [
|
||||
'echo "# By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default." >> %(installdir)s/etc/openmpi-mca-params.conf',
|
||||
'echo "btl_openib_allow_ib = true" >> %(installdir)s/etc/openmpi-mca-params.conf',
|
||||
]
|
||||
|
||||
libs = ["mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte"]
|
||||
sanity_check_paths = {
|
||||
'files': [
|
||||
"bin/%s" %
|
||||
binfile for binfile in [
|
||||
"ompi_info", "opal_wrapper", "orterun"]] + [
|
||||
"lib/lib%s.%s" %
|
||||
(libfile, SHLIB_EXT) for libfile in libs] + [
|
||||
"include/%s.h" %
|
||||
x for x in [
|
||||
"mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]], 'dirs': [], }
|
||||
|
||||
import os
|
||||
if os.environ.get("CLUSTERNAME") in ["BARBORA"]:
|
||||
modextravars = {'OMPI_MCA_btl_openib_if_include': 'mlx5_0',
|
||||
'OMPI_MCA_btl_tcp_if_include': '10.33.4.0/24',
|
||||
'OMPI_MCA_orte_base_help_aggregate': '0',
|
||||
}
|
||||
else:
|
||||
modextravars = {'OMPI_MCA_btl_openib_if_include': 'mlx4_0',
|
||||
'OMPI_MCA_oob_tcp_if_include': '10.0.0.0/8',
|
||||
}
|
||||
|
||||
moduleclass = 'mpi'
|
||||
27
o/OpenMPI/OpenMPI-4.0.5-NVHPC-21.2.eb
Normal file
27
o/OpenMPI/OpenMPI-4.0.5-NVHPC-21.2.eb
Normal file
@ -0,0 +1,27 @@
|
||||
# IT4Innovations 2021
|
||||
# LK
|
||||
|
||||
name = 'OpenMPI'
|
||||
version = '4.0.5'
|
||||
|
||||
homepage = 'https://www.open-mpi.org/'
|
||||
description = """The Open MPI Project is an open source MPI-3 implementation."""
|
||||
|
||||
toolchain = {'name': 'NVHPC', 'version': '21.2'}
|
||||
|
||||
source_urls = ['https://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
|
||||
sources = [SOURCELOWER_TAR_GZ]
|
||||
checksums = ['572e777441fd47d7f06f1b8a166e7f44b8ea01b8b2e79d1e299d509725d1bd05']
|
||||
|
||||
dependencies = [
|
||||
('UCX', '1.9.0') ,
|
||||
]
|
||||
|
||||
configopts = '--enable-shared --enable-mpi-thread-multiple --with-verbs '
|
||||
configopts += '--enable-mpirun-prefix-by-default '
|
||||
configopts += '--with-tm=/opt/pbs ' # Enable PBS
|
||||
configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings
|
||||
configopts += '--with-ucx=$EBROOTUCX '
|
||||
configopts += '--with-cuda=$EBROOTNVHPC/Linux_x86_64/21.2/cuda/11.2 '
|
||||
|
||||
moduleclass = 'mpi'
|
||||
27
p/phono3py/phono3py-1.22.2-conda.eb
Normal file
27
p/phono3py/phono3py-1.22.2-conda.eb
Normal file
@ -0,0 +1,27 @@
|
||||
# IT4Innovations 2021
|
||||
# LK
|
||||
|
||||
easyblock = "Conda"
|
||||
|
||||
name = 'phono3py'
|
||||
version = '1.22.2'
|
||||
versionsuffix = '-conda'
|
||||
|
||||
homepage = 'http://phonopy.sourceforge.net/phono3py/index.html'
|
||||
description = """This software calculates phonon-phonon interaction related properties"""
|
||||
|
||||
toolchain = SYSTEM
|
||||
|
||||
dependencies = [
|
||||
('Anaconda3', '2020.11'),
|
||||
]
|
||||
|
||||
requirements = "%(namelower)s=%(version)s python=3.8"
|
||||
channels = ['atztogo']
|
||||
|
||||
sanity_check_paths = {
|
||||
'files': ['bin/phono3py', 'bin/phonopy'],
|
||||
'dirs': ['bin', 'lib']
|
||||
}
|
||||
|
||||
moduleclass = 'phys'
|
||||
48
u/UCX/UCX-1.9.0-GCCcore-9.3.0.eb
Normal file
48
u/UCX/UCX-1.9.0-GCCcore-9.3.0.eb
Normal file
@ -0,0 +1,48 @@
|
||||
# IT4Innovations 2021
|
||||
# LK
|
||||
|
||||
easyblock = 'ConfigureMake'
|
||||
|
||||
name = 'UCX'
|
||||
version = '1.9.0'
|
||||
|
||||
homepage = 'http://www.openucx.org/'
|
||||
description = """Unified Communication X
|
||||
An open-source production grade communication framework for data centric
|
||||
and high-performance applications
|
||||
"""
|
||||
|
||||
toolchain = {'name': 'GCCcore', 'version': '9.3.0'}
|
||||
toolchainopts = {'pic': True}
|
||||
|
||||
source_urls = ['https://github.com/openucx/ucx/releases/download/v%(version)s']
|
||||
sources = ['%(namelower)s-%(version)s.tar.gz']
|
||||
checksums = ['a7a2c8841dc0d5444088a4373dc9b9cc68dbffcd917c1eba92ca8ed8e5e635fb']
|
||||
|
||||
builddependencies = [
|
||||
('binutils', '2.34'),
|
||||
('Autotools', '20200321'),
|
||||
('pkg-config', '0.29.2'),
|
||||
]
|
||||
|
||||
osdependencies = [OS_PKG_IBVERBS_DEV]
|
||||
|
||||
dependencies = [
|
||||
('numactl', '2.0.13'),
|
||||
]
|
||||
|
||||
configure_cmd = "contrib/configure-release"
|
||||
|
||||
configopts = '--enable-optimizations --enable-cma --enable-mt --with-verbs '
|
||||
configopts += '--without-java --disable-doxygen-doc '
|
||||
|
||||
buildopts = 'V=1'
|
||||
|
||||
sanity_check_paths = {
|
||||
'files': ['bin/ucx_info', 'bin/ucx_perftest', 'bin/ucx_read_profile'],
|
||||
'dirs': ['include', 'lib', 'share']
|
||||
}
|
||||
|
||||
sanity_check_commands = ["ucx_info -d"]
|
||||
|
||||
moduleclass = 'lib'
|
||||
Loading…
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Reference in New Issue
Block a user