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modified: g/GROMACS/GROMACS-2021.4-fosscuda-2020b-PLUMED-2.7.3.eb
new file: o/OpenMX/OpenMX-3.9-foss-2022b.eb modified: p/PLUMED/PLUMED-2.7.3-fosscuda-2020b.eb new file: s/ScaLAPACK/ScaLAPACK-3.0-intel-2023a.eb
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@ -37,6 +37,15 @@ patches = [
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'GROMACS-2020.5_fix_threads_gpu_Gmxapitests.patch',
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]
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checksums = [
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'cb708a3e3e83abef5ba475fdb62ef8d42ce8868d68f52dafdb6702dc9742ba1d',
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'406f5edd204be812f095a6f07ebc2673c5f6ddf1b1c1428fd336a80b9c629275',
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'0d16f53d428155197a0ed0b0974ce03422f199d7c463c4a9156a3b99e3c86234',
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'b7ffb292ec362e033db1bedd340353f0644dbaae872127750f3dda1ac7e87d49',
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'89fbb7e2754de45573632c74f53563bb979df9758c949238a35865391d6b53fb',
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]
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builddependencies = [
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('CMake', '3.18.4'),
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('scikit-build', '0.11.1'),
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@ -44,7 +53,7 @@ builddependencies = [
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dependencies = [
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('Python', '3.8.6'),
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('SciPy-bundle', '2020.11'),
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# ('SciPy-bundle', '2020.11'),
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('networkx', '2.5'),
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('PLUMED', local_plum_ver),
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]
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49
o/OpenMX/OpenMX-3.9-foss-2022b.eb
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49
o/OpenMX/OpenMX-3.9-foss-2022b.eb
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@ -0,0 +1,49 @@
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# IT4Innovations
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# LK 2023
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name = 'OpenMX'
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version = '3.9'
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homepage = 'http://www.openmx-square.org/index.html'
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description = """OpenMX (Open source package for Material eXplorer) is a software
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package for nano-scale material simulations based on density functional
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theories (DFT), norm-conserving pseudopotentials, and pseudo-atomic
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localized basis functions test.
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"""
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toolchain = {'name': 'foss', 'version': '2022b'}
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toolchainopts = {'usempi': True, 'openmp': True}
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source_urls = [
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'http://t-ozaki.issp.u-tokyo.ac.jp/openmx%(version).tar.gz',
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'http://www.openmx-square.org/bugfixed/21Oct17/'
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]
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sources = [
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{
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'filename': 'openmx%(version).tgz',
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'extract_cmd': 'mkdir -p %(builddir)s/openmx-%(version) && tar xzvf %s --strip-components=1 -C $_',
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},
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{
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'filename': 'patch%(version).9.tar.gz',
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'download_filename': 'patch%(version).9.tar.gz',
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'source_urls': ['http://www.openmx-square.org/bugfixed/21Oct17/']
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},
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]
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checksums = [
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'27bb56bd4d1582d33ad32108fb239b546bdd1bdffd6f5b739b4423da1ab93ae', # openmx3.9.tar.gz
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'20cccc4e3412a814a53568f400260e90f79f0bfb7e2bed84447fe071b26edd3', # patch3.9.9.tar.gz
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]
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dependencies = [
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('LAPACK', '3.10.0'),
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('ELPA', '2022.05.001'),
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]
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# The third party packages should be installed separately and added as
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# dependencies. The exception is w90, which is force built
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buildopts = 'all'
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# parallel build tends to fail
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parallel = 1
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moduleclass = 'chem'
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@ -25,7 +25,7 @@ dependencies = [
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('zlib', '1.2.11'),
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('GSL', '2.6'),
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('Python', '3.8.6'),
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('SciPy-bundle', '2020.11'),
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# ('SciPy-bundle', '2020.11'),
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('Boost', '1.74.0'),
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]
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s/ScaLAPACK/ScaLAPACK-3.0-intel-2023a.eb
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s/ScaLAPACK/ScaLAPACK-3.0-intel-2023a.eb
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@ -0,0 +1,50 @@
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# IT4Innovations
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# LK 2023
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easyblock = 'CMakeMake'
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name = 'ScaLAPACK'
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version = '3.0'
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versionsuffix = '-CUDA-12.2.0'
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homepage = 'https://www.netlib.org/scalapack/'
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description = """The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines
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redesigned for distributed memory MIMD parallel computers."""
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toolchain = {'name': 'intel', 'version': '2023a'}
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toolchainopts = {'pic': True}
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# https://github.com/amd/scalapack/archive/3.0.tar.gz
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source_urls = ['https://github.com/amd/scalapack/archive/']
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sources = ['%(version)s.tar.gz']
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checksums = ['6e6f3578f44a8e64518d276e7580530599ecfa8729f568303ed2590688e7096f']
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builddependencies = [
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('CMake', '3.24.3'),
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]
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dependencies = [
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# ('OpenMPI', '4.1.5', '-CUDA-12.2.0'),
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('BLIS', '3.1', '-amd'),
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('libFLAME', '5.2.0'),
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]
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# Config Opts based on AOCL User Guide:
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# https://developer.amd.com/wp-content/resources/AOCL_User%20Guide_2.2.pdf
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configopts = '-DBUILD_SHARED_LIBS=ON '
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configopts += '-DBLAS_LIBRARIES="$EBROOTBLIS/lib/libblis-mt.a" '
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configopts += '-DLAPACK_LIBRARIES="$EBROOTLIBFLAME/lib/libflame.a" '
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configopts += '-DCMAKE_C_COMPILER=mpicc '
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configopts += '-DCMAKE_Fortran_COMPILER=mpif90 '
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configopts += '-DUSE_OPTIMIZED_LAPACK_BLAS=ON '
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configopts += '-DUSE_F2C=ON '
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configopts += '-DCMAKE_Fortran_FLAGS="-lpthread -fopenmp $DCMAKE_Fortran_FLAGS" '
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sanity_check_paths = {
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'files': ['lib/libscalapack.%s' % SHLIB_EXT, 'lib64/libscalapack.%s' % SHLIB_EXT],
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'dirs': ["lib", "lib64"],
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}
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moduleclass = 'numlib'
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