modified: g/GROMACS/GROMACS-2021.4-fosscuda-2020b-PLUMED-2.7.3.eb

new file:   o/OpenMX/OpenMX-3.9-foss-2022b.eb
	modified:   p/PLUMED/PLUMED-2.7.3-fosscuda-2020b.eb
	new file:   s/ScaLAPACK/ScaLAPACK-3.0-intel-2023a.eb
This commit is contained in:
Lukas Krupcik 2023-10-04 11:21:01 +02:00
parent edd83a3585
commit 31c8108e32
4 changed files with 110 additions and 2 deletions

View File

@ -37,6 +37,15 @@ patches = [
'GROMACS-2020.5_fix_threads_gpu_Gmxapitests.patch',
]
checksums = [
'cb708a3e3e83abef5ba475fdb62ef8d42ce8868d68f52dafdb6702dc9742ba1d',
'406f5edd204be812f095a6f07ebc2673c5f6ddf1b1c1428fd336a80b9c629275',
'0d16f53d428155197a0ed0b0974ce03422f199d7c463c4a9156a3b99e3c86234',
'b7ffb292ec362e033db1bedd340353f0644dbaae872127750f3dda1ac7e87d49',
'89fbb7e2754de45573632c74f53563bb979df9758c949238a35865391d6b53fb',
]
builddependencies = [
('CMake', '3.18.4'),
('scikit-build', '0.11.1'),
@ -44,7 +53,7 @@ builddependencies = [
dependencies = [
('Python', '3.8.6'),
('SciPy-bundle', '2020.11'),
# ('SciPy-bundle', '2020.11'),
('networkx', '2.5'),
('PLUMED', local_plum_ver),
]

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@ -0,0 +1,49 @@
# IT4Innovations
# LK 2023
name = 'OpenMX'
version = '3.9'
homepage = 'http://www.openmx-square.org/index.html'
description = """OpenMX (Open source package for Material eXplorer) is a software
package for nano-scale material simulations based on density functional
theories (DFT), norm-conserving pseudopotentials, and pseudo-atomic
localized basis functions test.
"""
toolchain = {'name': 'foss', 'version': '2022b'}
toolchainopts = {'usempi': True, 'openmp': True}
source_urls = [
'http://t-ozaki.issp.u-tokyo.ac.jp/openmx%(version).tar.gz',
'http://www.openmx-square.org/bugfixed/21Oct17/'
]
sources = [
{
'filename': 'openmx%(version).tgz',
'extract_cmd': 'mkdir -p %(builddir)s/openmx-%(version) && tar xzvf %s --strip-components=1 -C $_',
},
{
'filename': 'patch%(version).9.tar.gz',
'download_filename': 'patch%(version).9.tar.gz',
'source_urls': ['http://www.openmx-square.org/bugfixed/21Oct17/']
},
]
checksums = [
'27bb56bd4d1582d33ad32108fb239b546bdd1bdffd6f5b739b4423da1ab93ae', # openmx3.9.tar.gz
'20cccc4e3412a814a53568f400260e90f79f0bfb7e2bed84447fe071b26edd3', # patch3.9.9.tar.gz
]
dependencies = [
('LAPACK', '3.10.0'),
('ELPA', '2022.05.001'),
]
# The third party packages should be installed separately and added as
# dependencies. The exception is w90, which is force built
buildopts = 'all'
# parallel build tends to fail
parallel = 1
moduleclass = 'chem'

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@ -25,7 +25,7 @@ dependencies = [
('zlib', '1.2.11'),
('GSL', '2.6'),
('Python', '3.8.6'),
('SciPy-bundle', '2020.11'),
# ('SciPy-bundle', '2020.11'),
('Boost', '1.74.0'),
]

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@ -0,0 +1,50 @@
# IT4Innovations
# LK 2023
easyblock = 'CMakeMake'
name = 'ScaLAPACK'
version = '3.0'
versionsuffix = '-CUDA-12.2.0'
homepage = 'https://www.netlib.org/scalapack/'
description = """The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines
redesigned for distributed memory MIMD parallel computers."""
toolchain = {'name': 'intel', 'version': '2023a'}
toolchainopts = {'pic': True}
# https://github.com/amd/scalapack/archive/3.0.tar.gz
source_urls = ['https://github.com/amd/scalapack/archive/']
sources = ['%(version)s.tar.gz']
checksums = ['6e6f3578f44a8e64518d276e7580530599ecfa8729f568303ed2590688e7096f']
builddependencies = [
('CMake', '3.24.3'),
]
dependencies = [
# ('OpenMPI', '4.1.5', '-CUDA-12.2.0'),
('BLIS', '3.1', '-amd'),
('libFLAME', '5.2.0'),
]
# Config Opts based on AOCL User Guide:
# https://developer.amd.com/wp-content/resources/AOCL_User%20Guide_2.2.pdf
configopts = '-DBUILD_SHARED_LIBS=ON '
configopts += '-DBLAS_LIBRARIES="$EBROOTBLIS/lib/libblis-mt.a" '
configopts += '-DLAPACK_LIBRARIES="$EBROOTLIBFLAME/lib/libflame.a" '
configopts += '-DCMAKE_C_COMPILER=mpicc '
configopts += '-DCMAKE_Fortran_COMPILER=mpif90 '
configopts += '-DUSE_OPTIMIZED_LAPACK_BLAS=ON '
configopts += '-DUSE_F2C=ON '
configopts += '-DCMAKE_Fortran_FLAGS="-lpthread -fopenmp $DCMAKE_Fortran_FLAGS" '
sanity_check_paths = {
'files': ['lib/libscalapack.%s' % SHLIB_EXT, 'lib64/libscalapack.%s' % SHLIB_EXT],
'dirs': ["lib", "lib64"],
}
moduleclass = 'numlib'