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modified: f/foss/foss-2017b.eb

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modified:   f/foss/foss-2018a.eb
	modified:   g/gompi/gompi-2017b.eb
	modified:   g/gompi/gompi-2018a.eb
	new file:   h/hwloc/hwloc-1.11.7-GCCcore-8.3.0.eb
	new file:   n/numactl/numactl-2.0.11-GCCcore-8.3.0.eb
	modified:   o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27.eb
	modified:   o/OpenMPI/OpenMPI-2.1.5-GCC-8.3.0-2.32.eb
	modified:   o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27.eb
	modified:   o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27.eb
	deleted:    h/hwloc/hwloc-1.11.7-GCC-8.3.0-2.32.eb
This commit is contained in:
Lukáš Krupčík 2019-11-21 12:26:25 +01:00
parent 0de1ad9e68
commit 1db987fcc4
10 changed files with 63 additions and 28 deletions
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4
f/foss/foss-2017b.eb
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@ -1,3 +1,5 @@
# IT4Innovations 2019
easyblock = 'Toolchain'
name = 'foss'
@ -24,7 +26,7 @@ local_comp_mpi_tc = (local_comp_mpi_tc_name, version)
# For local_binutils, stick to http://wiki.osdev.org/Cross-Compiler_Successful_Builds
dependencies = [
('GCC', local_gccver),
('OpenMPI', '2.1.1', '', ('GCC', local_gccver)),
('OpenMPI', '2.1.5', '', ('GCC', local_gccver)),
(local_blaslib, local_blasver, '', ('GCC', local_gccver)),
('FFTW', '3.3.6', '', local_comp_mpi_tc),
('ScaLAPACK', '2.0.2', '-%s' % blas, local_comp_mpi_tc),

4
f/foss/foss-2018a.eb
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@ -1,3 +1,5 @@
# IT4Innovations 2019
easyblock = 'Toolchain'
name = 'foss'
@ -24,7 +26,7 @@ local_comp_mpi_tc = (local_comp_mpi_tc_name, version)
# For local_binutils, stick to http://wiki.osdev.org/Cross-Compiler_Successful_Builds
dependencies = [
('GCC', local_gccver),
('OpenMPI', '3.0.0', '', ('GCC', local_gccver)),
('OpenMPI', '3.1.4', '', ('GCC', local_gccver)),
(local_blaslib, local_blasver, '', ('GCC', local_gccver)),
('FFTW', '3.3.7', '', local_comp_mpi_tc),
('ScaLAPACK', '2.0.2', '-%s' % blas, local_comp_mpi_tc),

4
g/gompi/gompi-2017b.eb
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@ -1,3 +1,5 @@
# IT4Innovations 2019
easyblock = "Toolchain"
name = 'gompi'
@ -14,7 +16,7 @@ local_gccver = '6.3.0-2.27'
# local_compiler toolchain dependencies
dependencies = [
('GCC', local_gccver), # includes both GCC and local_binutils
('OpenMPI', '2.1.1', '', ('GCC', local_gccver)),
('OpenMPI', '2.1.5', '', ('GCC', local_gccver)),
]
moduleclass = 'toolchain'

4
g/gompi/gompi-2018a.eb
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@ -1,3 +1,5 @@
# IT4Innovations 2019
easyblock = "Toolchain"
name = 'gompi'
@ -14,7 +16,7 @@ local_gccver = '6.3.0-2.27'
# local_compiler toolchain dependencies
dependencies = [
('GCC', local_gccver), # includes both GCC and local_binutils
('OpenMPI', '3.0.0', '', ('GCC', local_gccver)),
('OpenMPI', '3.1.4', '', ('GCC', local_gccver)),
]
moduleclass = 'toolchain'

7
h/hwloc/hwloc-1.11.7-GCC-8.3.0-2.32.eb → h/hwloc/hwloc-1.11.7-GCCcore-8.3.0.eb
View File

@ -13,13 +13,16 @@ system attributes such as cache and memory information as well as the locality o
network interfaces, InfiniBand HCAs or GPUs. It primarily aims at helping applications with gathering
information about modern local_computing hardware so as to exploit it accordingly and efficiently."""
toolchain = {'name': 'GCC', 'version': '8.3.0-2.32'}
toolchain = {'name': 'GCCcore', 'version': '8.3.0'}
source_urls = [
'http://www.open-mpi.org/software/hwloc/v%(version_major_minor)s/downloads/']
sources = [SOURCE_TAR_GZ]
dependencies = [('numactl', '2.0.11')]
dependencies = [
('numactl', '2.0.11'),
('binutils', '2.32'),
]
configopts = "--enable-libnuma=$EBROOTNUMACTL"

38
n/numactl/numactl-2.0.11-GCCcore-8.3.0.eb Normal file
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@ -0,0 +1,38 @@
# IT4Innovations 2019
easyblock = 'ConfigureMake'
name = 'numactl'
version = '2.0.11'
homepage = 'http://oss.sgi.com/projects/libnuma/'
description = """The numactl program allows you to run your application program on specific cpu's and memory nodes.
It does this by supplying a NUMA memory policy to the operating system before running your program.
The libnuma library provides convenient ways for you to add NUMA memory policies into your own program."""
toolchain = {'name': 'GCCcore', 'version': '8.3.0'}
toolchainopts = {'pic': True}
source_urls = ['https://github.com/numactl/numactl/archive/']
sources = ['v2.0.12.tar.gz']
checksums = ['a4d2292af28fb20007ddb9706f8bb1cc']
builddependencies = [
('binutils', '2.32'),
('Autotools', '20180311', '', True),
]
preconfigopts = "./autogen.sh && "
sanity_check_paths = {
'files': [
'bin/numactl',
'bin/numastat',
'lib/libnuma.%s' %
SHLIB_EXT,
'lib/libnuma.a'],
'dirs': [
'share/man',
'include']}
moduleclass = 'tools'

12
o/OpenMPI/OpenMPI-1.10.7-GCC-6.3.0-2.27.eb
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@ -1,3 +1,5 @@
# IT4Innovations 2019
easyblock = 'ConfigureMake'
name = 'OpenMPI'
@ -14,21 +16,13 @@ source_urls = [
dependencies = [('hwloc', '1.11.7')]
builddependencies = [
('Java', '1.8.0_121', '', True)
]
configopts = '--with-threads=posix --enable-shared --enable-mpi-thread-multiple --with-verbs '
# suppress failure modes in relation to mpirun path
configopts += '--enable-mpirun-prefix-by-default '
configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
# statically link local_component, don't do dynamic loading
configopts += '--disable-dlopen '
configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
configopts += '--enable-mpi-java ' # Java support RT#4090
# for PBS Pro 13
preconfigopts = 'export LIBS="-ldl" && '
configopts += '--with-tm=/opt/pbs ' # Enable PBS
# needed for --with-verbs
osdependencies = [('libibverbs-dev', 'libibverbs-devel')]

4
o/OpenMPI/OpenMPI-2.1.5-GCC-8.3.0-2.32.eb
View File

@ -15,7 +15,7 @@ source_urls = [
sources = [SOURCELOWER_TAR_GZ]
dependencies = [
('hwloc', '1.11.7')
('hwloc', '1.11.7', '', ('GCCcore', '8.3.0'))
]
configopts = '--enable-shared --enable-mpi-thread-multiple --with-verbs '
@ -24,7 +24,7 @@ configopts += '--enable-mpirun-prefix-by-default '
configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
configopts += '--disable-dlopen ' # dont disable dlopen!
# https://github.com/open-mpi/ompi/issues/3630
configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
configopts += '--with-tm=/opt/pbs ' # Enable PBS
#configopts += '--enable-mpi-java ' # Java support RT#4090
configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings

8
o/OpenMPI/OpenMPI-3.1.4-GCC-6.3.0-2.27.eb
View File

@ -14,10 +14,6 @@ source_urls = [
'http://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
sources = [SOURCELOWER_TAR_GZ]
builddependencies = [
('Java', '1.8.0_121', '', True)
]
dependencies = [
('hwloc', '1.11.7'),
('zlib', '1.2.11', '', True),
@ -30,8 +26,8 @@ configopts += '--enable-mpirun-prefix-by-default '
configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
# configopts += '--disable-dlopen ' # dont disable dlopen!
# https://github.com/open-mpi/ompi/issues/3630
configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
configopts += '--enable-mpi-java ' # Java support RT#4090
configopts += '--with-tm=/opt/pbs ' # Enable PBS
#configopts += '--enable-mpi-java ' # Java support RT#4090
configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings
# for PBS Pro 13

6
o/OpenMPI/OpenMPI-4.0.0-GCC-6.3.0-2.27.eb
View File

@ -13,10 +13,6 @@ toolchain = {'name': 'GCC', 'version': '6.3.0-2.27'}
source_urls = ['https://github.com/open-mpi/ompi/archive/']
sources = ['v4.0.0.tar.gz']
#builddependencies = [
# ('Java', '1.8.0_144', '', True)
#]
dependencies = [
('hwloc', '2.0.3'),
('zlib', '1.2.11', '', True),
@ -32,7 +28,7 @@ configopts += '--enable-mpirun-prefix-by-default '
configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
# configopts += '--disable-dlopen ' # dont disable dlopen!
# https://github.com/open-mpi/ompi/issues/3630
configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
configopts += '--with-tm=/opt/pbs ' # Enable PBS
#configopts += '--enable-mpi-java ' # Java support RT#4090
configopts += '--enable-mpi-cxx ' # Enable building the C++ MPI bindings